; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040405 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040405
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr13:4503950..4506899
RNA-Seq ExpressionLag0040405
SyntenyLag0040405
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-9250.81Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDM+LSIA++  +D L    + + N++  T K       ESM++    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+LP+CKRPE++ KVDDP +CKYHRVI H VE+CFVLK+LI KLA E KIELD+
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGK--------NQRKK-------NPKKPQPKRKRSTEFSQPRQPVTLS------EFFSKTFHKKEKENFA------TSYCIDV----
        DEV Q+NH +V             +QRK         P   + ++K  T  SQ ++  +        EF  ++F +   E         T+  ++V    
Subjt:  DEVTQSNHASVKGKGK--------NQRKK-------NPKKPQPKRKRSTEFSQPRQPVTLS------EFFSKTFHKKEKENFA------TSYCIDV----

Query:  ---EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEV
           EE+DNS + +QRTSVFD IKP TTR SVFQR+SMAT KEENQC   T  + SAF+RLS+S  +K + ST  FDRLK+ +DQ QR+M  LK K F E 
Subjt:  ---EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEV

Query:  SCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP
        + D K+ S VPS+MKRK SV INTE GSL   P
Subjt:  SCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP

KAA0033746.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.4e-9346.48Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLK-IEGNDVETTTK-------ESMVISTILLKSSSK
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEEL+TRAHDMELSIA+   +D L    K  + N++  T K       ESM++    LKS SK
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLK-IEGNDVETTTK-------ESMVISTILLKSSSK

Query:  EKT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELD
         K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+LP+CKRPE+  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIELD
Subjt:  EKT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELD

Query:  LDEVTQSNHASV--------------------------------------------------------------------------------KG----KG
        +DEV Q+NH +V                                                                                KG    K 
Subjt:  LDEVTQSNHASV--------------------------------------------------------------------------------KG----KG

Query:  KNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMS
        K +R K   KP+P + +  +F QPR+ + L+EF  ++F +   E         T+  ++V       EEVDNS + +QRT VF RIKP T R SVFQR+S
Subjt:  KNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMS

Query:  MATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP
        MA  +EENQC  ST  R SAF+RLS+STL+K + STS FDRLK+ +DQ QR+M +LK K F E + D K+ S VPS+MKRK SV INTE GSL   P
Subjt:  MATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.1e-9954.13Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE
        +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA++  +D L P  + + N+++ T        KESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  R+ T KERQ+K++PFPD+D+ +MLEQLLE  LI+LP+CKRPE+  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIELD+
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDVE-------EVDNSKKGEQRTSVFDR
        DEV Q+NHA        +   NP K      +  +F Q R+ +TL+EF  ++F + + E          +  ++V+       EV+NS +  QRTSVFDR
Subjt:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDVE-------EVDNSKKGEQRTSVFDR

Query:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL
        IKPSTTR SVFQR+S+AT +EENQC     TR S  +RLS+STL+K + STS FDRLK+ +DQ QR+M + K K F E + D K+ S VPS+MKRK  V 
Subjt:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL

Query:  INTEAGSLKFLP
        INTE GSL   P
Subjt:  INTEAGSLKFLP

KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-9452.67Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDMELSIA++  +  L    + + N++  T K       ESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE

Query:  K---------TNGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+L  CKRP +  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KI+LD+
Subjt:  K---------TNGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDR
        DE        +KGK +                  +F QPR+ +TL+EF  ++F +   E         T+  ++V       EEVDNS + +QRTSVFDR
Subjt:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDR

Query:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL
        IKP TTR  VFQR+SMAT +EENQC  ST TR SAF+RLS+ST +K + STS FDRLK+ +DQ QR+M +LK K F E + D K+ S +PS   RK SV 
Subjt:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL

Query:  INTEAGSLKFLP
        IN E GSL   P
Subjt:  INTEAGSLKFLP

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-9145.57Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE
        +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI ++  +D L P  + + N++  T        KESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  R+ T KERQ+K++PF D+D+ +MLEQLLE  LI+LPKCKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIEL++
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNH--------------------------------------------------------------------------------ASVKGKGKNQRK
        DEV Q+NH                                                                                 S+  K K +R 
Subjt:  DEVTQSNH--------------------------------------------------------------------------------ASVKGKGKNQRK

Query:  KNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTF---HKKEKENFATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSK
        K    P+P + +  +F Q R+ +TL+EF  ++F   H +E     T +   +          +EV+N  +  QRTSVFDRIKPSTTR SVFQR+SMAT +
Subjt:  KNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTF---HKKEKENFATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSK

Query:  EENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEA
        EENQC     TR S F+RLS+S  +K++ STS FDRLK+ +DQ QR+M +LK K F E + D K+ S VPS+MKRK  V INT+A
Subjt:  EENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEA

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein1.8e-9250.81Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDM+LSIA++  +D L    + + N++  T K       ESM++    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+LP+CKRPE++ KVDDP +CKYHRVI H VE+CFVLK+LI KLA E KIELD+
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGK--------NQRKK-------NPKKPQPKRKRSTEFSQPRQPVTLS------EFFSKTFHKKEKENFA------TSYCIDV----
        DEV Q+NH +V             +QRK         P   + ++K  T  SQ ++  +        EF  ++F +   E         T+  ++V    
Subjt:  DEVTQSNHASVKGKGK--------NQRKK-------NPKKPQPKRKRSTEFSQPRQPVTLS------EFFSKTFHKKEKENFA------TSYCIDV----

Query:  ---EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEV
           EE+DNS + +QRTSVFD IKP TTR SVFQR+SMAT KEENQC   T  + SAF+RLS+S  +K + ST  FDRLK+ +DQ QR+M  LK K F E 
Subjt:  ---EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEV

Query:  SCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP
        + D K+ S VPS+MKRK SV INTE GSL   P
Subjt:  SCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP

A0A5A7SUW1 Retrotransposon gag protein1.7e-9346.48Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLK-IEGNDVETTTK-------ESMVISTILLKSSSK
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEEL+TRAHDMELSIA+   +D L    K  + N++  T K       ESM++    LKS SK
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLK-IEGNDVETTTK-------ESMVISTILLKSSSK

Query:  EKT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELD
         K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+LP+CKRPE+  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIELD
Subjt:  EKT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELD

Query:  LDEVTQSNHASV--------------------------------------------------------------------------------KG----KG
        +DEV Q+NH +V                                                                                KG    K 
Subjt:  LDEVTQSNHASV--------------------------------------------------------------------------------KG----KG

Query:  KNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMS
        K +R K   KP+P + +  +F QPR+ + L+EF  ++F +   E         T+  ++V       EEVDNS + +QRT VF RIKP T R SVFQR+S
Subjt:  KNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMS

Query:  MATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP
        MA  +EENQC  ST  R SAF+RLS+STL+K + STS FDRLK+ +DQ QR+M +LK K F E + D K+ S VPS+MKRK SV INTE GSL   P
Subjt:  MATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLP

A0A5A7URH1 Ty3-gypsy retrotransposon protein3.5e-9954.13Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE
        +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA++  +D L P  + + N+++ T        KESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  R+ T KERQ+K++PFPD+D+ +MLEQLLE  LI+LP+CKRPE+  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIELD+
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDVE-------EVDNSKKGEQRTSVFDR
        DEV Q+NHA        +   NP K      +  +F Q R+ +TL+EF  ++F + + E          +  ++V+       EV+NS +  QRTSVFDR
Subjt:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDVE-------EVDNSKKGEQRTSVFDR

Query:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL
        IKPSTTR SVFQR+S+AT +EENQC     TR S  +RLS+STL+K + STS FDRLK+ +DQ QR+M + K K F E + D K+ S VPS+MKRK  V 
Subjt:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL

Query:  INTEAGSLKFLP
        INTE GSL   P
Subjt:  INTEAGSLKFLP

A0A5A7VFA5 Ty3-gypsy retrotransposon protein1.5e-9452.67Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE
        +SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELATRAHDMELSIA++  +  L    + + N++  T K       ESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTK-------ESMVISTILLKSSSKE

Query:  K---------TNGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  RR T +ERQKK++PFPD+D+ +MLEQL+E  LI+L  CKRP +  KVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KI+LD+
Subjt:  K---------TNGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDR
        DE        +KGK +                  +F QPR+ +TL+EF  ++F +   E         T+  ++V       EEVDNS + +QRTSVFDR
Subjt:  DEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTFHKKEKENFA------TSYCIDV-------EEVDNSKKGEQRTSVFDR

Query:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL
        IKP TTR  VFQR+SMAT +EENQC  ST TR SAF+RLS+ST +K + STS FDRLK+ +DQ QR+M +LK K F E + D K+ S +PS   RK SV 
Subjt:  IKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVL

Query:  INTEAGSLKFLP
        IN E GSL   P
Subjt:  INTEAGSLKFLP

A0A5D3BX77 Retrotransposon gag protein5.3e-9245.57Show/hide
Query:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE
        +SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI ++  +D L P  + + N++  T        KESMV+    LKS SK 
Subjt:  MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETT-------TKESMVISTILLKSSSKE

Query:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL
        K          +  R+ T KERQ+K++PF D+D+ +MLEQLLE  LI+LPKCKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKLA E KIEL++
Subjt:  KT---------NGTRRLTSKERQKKIHPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDL

Query:  DEVTQSNH--------------------------------------------------------------------------------ASVKGKGKNQRK
        DEV Q+NH                                                                                 S+  K K +R 
Subjt:  DEVTQSNH--------------------------------------------------------------------------------ASVKGKGKNQRK

Query:  KNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTF---HKKEKENFATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSK
        K    P+P + +  +F Q R+ +TL+EF  ++F   H +E     T +   +          +EV+N  +  QRTSVFDRIKPSTTR SVFQR+SMAT +
Subjt:  KNPKKPQPKRKRSTEFSQPRQPVTLSEFFSKTF---HKKEKENFATSYCIDV----------EEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSK

Query:  EENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEA
        EENQC     TR S F+RLS+S  +K++ STS FDRLK+ +DQ QR+M +LK K F E + D K+ S VPS+MKRK  V INT+A
Subjt:  EENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKVADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTAGATTGCAAGGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCAC
CTTTGAAGAACTAGCAACTCGCGCTCACGATATGGAGCTAAGTATTGCTAGCCAAGAAAACCAAGACCTTCTACCTCCTAACTTGAAGATAGAAGGAAATGATGTCGAAA
CGACTACAAAAGAATCTATGGTCATAAGCACAATTCTTCTCAAGTCATCTTCGAAAGAAAAAACAAATGGAACACGTCGCTTAACTTCAAAGGAAAGACAGAAGAAAATC
CATCCTTTCCCTGATGCCGACATCCCTGAAATGTTGGAACAACTACTGGAGGCGCATCTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGA
TCCCAAGTTTTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTACGGAAGGAAAAATTGAGCTTGACC
TTGATGAAGTAACTCAGTCAAATCATGCTTCAGTCAAAGGAAAGGGCAAAAATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGAGAAGTACAGAGTTT
TCTCAACCTCGACAGCCGGTGACTTTGAGTGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGCAACTTCCTACTGTATCGACGTAGAAGAAGTTGA
CAATTCCAAGAAGGGTGAACAAAGAACTTCTGTCTTCGATCGCATCAAGCCTTCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCACATCAAAAGAAGAAA
ATCAATGTTCGGCGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAGGAAAAGTCAGTCTTCAACATCTATCTTTGATCGCCTCAAAGTA
GCAGACGATCAACCTCAAAGAAAGATGGATAACTTAAAGGTGAAATTGTTCGATGAAGTAAGCTGTGACAAGAAGCTTCAAAGTATTGTCCCGTCACAAATGAAAAGGAA
GTTCTCTGTTCTCATAAATACAGAAGCTGGTTCCTTGAAGTTCCTTCCTCCAAGTTCGAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTC
ACGTCGCTGCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCTACAGTTGCC
TTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTTGCTGCAGTTGCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTTACGTT
GCTTCGTTGCAGTTGCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTCCGCTGCAGTTGCCTTCCCTCCAAAGTTTGAGGGTTCTCACGCTGCTCTGCTGCAGTTGCCTT
CCTCCAAGTTCGAAGGTTTTCACGCCGCTTCGTTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTC
TCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCACGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCA
GTGCCTTCCTCCAAGTTCGAAGGTTTTCACGCCGCTTCGTTGTAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAG
GTTCTCACACGCTCCGCTGCAGTTCCTTCTCTCCAAGTTCGAATGAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCT
GCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCACGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCAGTGCCTTCCTCCAAGTTCAAAGGTTTTCACGCC
GCTTCGTTGTAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTCCGCTGCAGTTCCTTCTCTC
CAAGTTCGAATGAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCA
CGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCAACTCCTTCTCTCCAAGTTCGAAGGAGGTTCTCACGTTGCTTCGTTGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTAGATTGCAAGGATCGCCTCACTGAACTCTCTTCCGTTGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCAC
CTTTGAAGAACTAGCAACTCGCGCTCACGATATGGAGCTAAGTATTGCTAGCCAAGAAAACCAAGACCTTCTACCTCCTAACTTGAAGATAGAAGGAAATGATGTCGAAA
CGACTACAAAAGAATCTATGGTCATAAGCACAATTCTTCTCAAGTCATCTTCGAAAGAAAAAACAAATGGAACACGTCGCTTAACTTCAAAGGAAAGACAGAAGAAAATC
CATCCTTTCCCTGATGCCGACATCCCTGAAATGTTGGAACAACTACTGGAGGCGCATCTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGA
TCCCAAGTTTTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTACGGAAGGAAAAATTGAGCTTGACC
TTGATGAAGTAACTCAGTCAAATCATGCTTCAGTCAAAGGAAAGGGCAAAAATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGAGAAGTACAGAGTTT
TCTCAACCTCGACAGCCGGTGACTTTGAGTGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAAAACTTTGCAACTTCCTACTGTATCGACGTAGAAGAAGTTGA
CAATTCCAAGAAGGGTGAACAAAGAACTTCTGTCTTCGATCGCATCAAGCCTTCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCACATCAAAAGAAGAAA
ATCAATGTTCGGCGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAGGAAAAGTCAGTCTTCAACATCTATCTTTGATCGCCTCAAAGTA
GCAGACGATCAACCTCAAAGAAAGATGGATAACTTAAAGGTGAAATTGTTCGATGAAGTAAGCTGTGACAAGAAGCTTCAAAGTATTGTCCCGTCACAAATGAAAAGGAA
GTTCTCTGTTCTCATAAATACAGAAGCTGGTTCCTTGAAGTTCCTTCCTCCAAGTTCGAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTC
ACGTCGCTGCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTCGCTACAGTTGCC
TTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTTTGCTGCAGTTGCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTTACGTT
GCTTCGTTGCAGTTGCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTCCGCTGCAGTTGCCTTCCCTCCAAAGTTTGAGGGTTCTCACGCTGCTCTGCTGCAGTTGCCTT
CCTCCAAGTTCGAAGGTTTTCACGCCGCTTCGTTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTC
TCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCACGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCA
GTGCCTTCCTCCAAGTTCGAAGGTTTTCACGCCGCTTCGTTGTAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAG
GTTCTCACACGCTCCGCTGCAGTTCCTTCTCTCCAAGTTCGAATGAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCT
GCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCACGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCAGTGCCTTCCTCCAAGTTCAAAGGTTTTCACGCC
GCTTCGTTGTAGTTCCTTCCTCCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTCCGCTGCAGTTCCTTCTCTC
CAAGTTCGAATGAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCTCTCAAAGTTCGAAGGTTGTCACGCGCTTCGCTGCAGTTCCTTCTCTCCAAATTCAAAGGTTCTCA
CGTCCTTCTCTCCAAGTTCGAAGGTTCTCCCATGCGTCGCTGCAACTCCTTCTCTCCAAGTTCGAAGGAGGTTCTCACGTTGCTTCGTTGCAGTAA
Protein sequenceShow/hide protein sequence
MSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASQENQDLLPPNLKIEGNDVETTTKESMVISTILLKSSSKEKTNGTRRLTSKERQKKI
HPFPDADIPEMLEQLLEAHLIELPKCKRPEEMEKVDDPKFCKYHRVIGHPVERCFVLKDLILKLATEGKIELDLDEVTQSNHASVKGKGKNQRKKNPKKPQPKRKRSTEF
SQPRQPVTLSEFFSKTFHKKEKENFATSYCIDVEEVDNSKKGEQRTSVFDRIKPSTTRPSVFQRMSMATSKEENQCSASTSTRPSAFQRLSVSTLRKSQSSTSIFDRLKV
ADDQPQRKMDNLKVKLFDEVSCDKKLQSIVPSQMKRKFSVLINTEAGSLKFLPPSSRFSRRFAAVPSSKFEGSHVAALQFLPPSSKVLTRFAVVPSSKFEGSLTRFATVA
FLQVRRFSHALCCSCLPPSSKVLTRFAAPPSSRVLTLLRCSCLPPSSRVLTRSAAVAFPPKFEGSHAALLQLPSSKFEGFHAASLQFLPPKFEGSHALRCSSFLQVRSSF
SQSSKVVTRFAAVPSLQIQRFSRPSLQVRRFSHASLQCLPPSSKVFTPLRCSSFLPNSKVLTRSAAVPSSKFEGSHTLRCSSFSPSSNEVLTLLRCSSFSQSSKVVTRFA
AVPSLQIQRFSRPSLQVRRFSHASLQCLPPSSKVFTPLRCSSFLPNSKVLTRSAAVPSSKFEGSHTLRCSSFSPSSNEVLTLLRCSSFSQSSKVVTRFAAVPSLQIQRFS
RPSLQVRRFSHASLQLLLSKFEGGSHVASLQ