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Lag0040417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionR3H domain-containing protein 2-like
Genome locationchr13:4582086..4582439
RNA-Seq ExpressionLag0040417
SyntenyLag0040417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573881.1 R3H domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0847.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

KAG7012945.1 R3H domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0847.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

XP_022945443.1 R3H domain-containing protein 1-like [Cucurbita moschata]1.4e-0847.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

XP_022968225.1 R3H domain-containing protein 1-like [Cucurbita maxima]1.4e-0847.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

XP_023541781.1 R3H domain-containing protein 1-like [Cucurbita pepo subsp. pepo]1.4e-0847.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

TrEMBL top hitse value%identityAlignment
A0A1S3BGI0 R3H domain-containing protein 2-like1.6e-0545.56Show/hide
Query:  SAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLE----------HSIAVAALSDRPISA--NQSEDSISQVDRFLRQAFQNRCKR
        SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+           S +  +LS    SA    SED+I+QVD+FLR+A  N  +R
Subjt:  SAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLE----------HSIAVAALSDRPISA--NQSEDSISQVDRFLRQAFQNRCKR

A0A5D3CQ27 R3H domain-containing protein 2-like7.2e-0644.55Show/hide
Query:  QMPRLLLGDC--SAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPI-----SANQ-----SEDSISQVDRFLR-QAFQNRCK
        Q+ R + G    SA   L+ PES +VAD+D A  RLMLPS S N+NSI L+H +A A  +   +     SA+      SED+I+ VDRFLR +A  N  K
Subjt:  QMPRLLLGDC--SAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPI-----SANQ-----SEDSISQVDRFLR-QAFQNRCK

Query:  R
        R
Subjt:  R

A0A6J1DB08 R3H domain-containing protein 2-like8.6e-0748.28Show/hide
Query:  SAAADLEGPESLKVADMDEALRRLMLPSDST-NQNSIHLEHSIAVAALSDRP-----ISA---NQSEDSISQVDRFLRQAFQNRCKR
        SA  DL  P+S +VAD+DEA+ RLMLPS S+  +NS  L+HS+A AA +  P     +S+   + SED I+QVD+FLR+A  N  +R
Subjt:  SAAADLEGPESLKVADMDEALRRLMLPSDST-NQNSIHLEHSIAVAALSDRP-----ISA---NQSEDSISQVDRFLRQAFQNRCKR

A0A6J1G0Z8 R3H domain-containing protein 1-like7.0e-0947.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

A0A6J1HWM6 R3H domain-containing protein 1-like7.0e-0947.87Show/hide
Query:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR
        D SA  DL  PES +VAD+DEA+ RLMLPS S  +NS  L+HS+A AAL     SA+               SED I+QVD+FLR+A  N  +R
Subjt:  DCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISAN--------------QSEDSISQVDRFLRQAFQNRCKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATTCCCCAACTCCTAGAGATTTATCGTGCCATTTGCGTTCTCGATTACCCGCGATCTTTGTTTTGGACTCATTTTTTTTCTCAAATGCCTCGATTGCTGCTAGG
AGATTGCTCTGCAGCAGCGGATCTCGAAGGTCCGGAGTCATTGAAGGTTGCTGATATGGATGAGGCCTTGAGACGATTGATGTTGCCATCCGATTCTACGAATCAGAATT
CCATACACTTGGAGCATTCCATTGCCGTTGCTGCTCTCTCAGATCGTCCGATTTCTGCTAATCAGTCCGAGGATTCTATCAGTCAGGTTGATCGGTTCCTTCGTCAGGCT
TTTCAGAATCGTTGCAAGCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGATTCCCCAACTCCTAGAGATTTATCGTGCCATTTGCGTTCTCGATTACCCGCGATCTTTGTTTTGGACTCATTTTTTTTCTCAAATGCCTCGATTGCTGCTAGG
AGATTGCTCTGCAGCAGCGGATCTCGAAGGTCCGGAGTCATTGAAGGTTGCTGATATGGATGAGGCCTTGAGACGATTGATGTTGCCATCCGATTCTACGAATCAGAATT
CCATACACTTGGAGCATTCCATTGCCGTTGCTGCTCTCTCAGATCGTCCGATTTCTGCTAATCAGTCCGAGGATTCTATCAGTCAGGTTGATCGGTTCCTTCGTCAGGCT
TTTCAGAATCGTTGCAAGCGCTGA
Protein sequenceShow/hide protein sequence
MLIPQLLEIYRAICVLDYPRSLFWTHFFSQMPRLLLGDCSAAADLEGPESLKVADMDEALRRLMLPSDSTNQNSIHLEHSIAVAALSDRPISANQSEDSISQVDRFLRQA
FQNRCKR