; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040438 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040438
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGABA transporter 1
Genome locationchr13:4822430..4823442
RNA-Seq ExpressionLag0040438
SyntenyLag0040438
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR013057 - Amino acid transporter, transmembrane domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2627070.1 GABA transporter 1-like [Pyrus ussuriensis x Pyrus communis]4.6e-3362.5Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP K QFS+RN+VPRLI  SLSV+VAT F  AM PFF D+MAL GAFGCIP+DFI+ M+FYN TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

XP_009350466.1 PREDICTED: GABA transporter 1-like [Pyrus x bretschneideri]4.6e-3362.5Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP K QFS+RN+VPRLI  SLSV+VAT F  AM PFF D+MAL GAFGCIP+DFI+ M+FYN TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

XP_021821719.1 GABA transporter 1-like [Prunus avium]3.6e-3363.89Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP   QFS RN+VPRLI  SLSVVVAT F  AM PFF D+MALLGAFGCIP+DFI+ M+FYNATFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

XP_022139295.1 GABA transporter 1 [Momordica charantia]6.5e-3563.19Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        +TNAFCLLQVSAVT  Y QPTNE FEKKF DPNK QFSIRN+VPRLI+ SLSVV+ATIF  AM PFF DLMAL+GAFG IP+DFIM M+FYN TFK SKG
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
           F            +    G+   S    + DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

XP_028949923.1 GABA transporter 1-like [Malus domestica]4.6e-3362.5Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP K QFS+RN+VPRLI  SLSV+VAT F  AM PFF D+MAL GAFGCIP+DFI+ M+FYN TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

TrEMBL top hitse value%identityAlignment
A0A0A0KRH2 Aa_trans domain-containing protein2.3e-3362.33Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        +TN FCLLQVSAVT  Y QPTNE FEKKF DPNK QFSIRNIVPRLIS SLSVV+ATI + AM PFF DLMAL+GAFG IP+DFIM M+FYNATFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQF--DCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
           F          +   + G    G  S    V DAK Y LFAN+
Subjt:  SPCFLGKQF--DCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

A0A498KJH5 Aa_trans domain-containing protein2.3e-3362.5Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP K QFS+RN+VPRLI  SLSV+VAT F  AM PFF D+MAL GAFGCIP+DFI+ M+FYN TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

A0A5N5HNF9 GABA transporter 1-like2.3e-3362.5Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP K QFS+RN+VPRLI  SLSV+VAT F  AM PFF D+MAL GAFGCIP+DFI+ M+FYN TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

A0A6J1CBX9 GABA transporter 13.1e-3563.19Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        +TNAFCLLQVSAVT  Y QPTNE FEKKF DPNK QFSIRN+VPRLI+ SLSVV+ATIF  AM PFF DLMAL+GAFG IP+DFIM M+FYN TFK SKG
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
           F            +    G+   S    + DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

A0A6P5SZB3 GABA transporter 1-like1.7e-3363.89Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        MTN F LLQVSAVT  Y QPTNEVFEKKF DP   QFS RN+VPRLI  SLSVVVAT F  AM PFF D+MALLGAFGCIP+DFI+ M+FYNATFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F          F + G   V   S    V DAKTY LFANM
Subjt:  SPCFLGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

SwissProt top hitse value%identityAlignment
F4HW02 GABA transporter 12.7e-2344.3Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        + N F +LQ+SAV   Y QP N++ E   +DP K +FSIRN++PRL+  SL VV+ATI V AM PFF D+ +LLGAFG IP+DF++ +VF+N TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCF-----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F     +   F C     +         +    + DA TY LFA++
Subjt:  SPCF-----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

Q8L4X4 Probable GABA transporter 22.3e-1438.19Show/hide
Query:  FCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGSPCF
        F LLQ+ A+   Y Q   E+ EKK  D  K  FS RN+VPRLI  +L +     F+ AM PFF D+ A++GAFG IP+DF++ M+ YN T+K ++ S  +
Subjt:  FCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGSPCF

Query:  -----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFAN
             +   F C    G        F S    V DA  + LF++
Subjt:  -----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFAN

Arabidopsis top hitse value%identityAlignment
AT1G08230.2 Transmembrane amino acid transporter family protein1.9e-2444.3Show/hide
Query:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG
        + N F +LQ+SAV   Y QP N++ E   +DP K +FSIRN++PRL+  SL VV+ATI V AM PFF D+ +LLGAFG IP+DF++ +VF+N TFK SK 
Subjt:  MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKG

Query:  SPCF-----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM
        S  F     +   F C     +         +    + DA TY LFA++
Subjt:  SPCF-----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM

AT1G10010.1 amino acid permease 86.3e-0431.91Show/hide
Query:  YFQPTNEVFEKKFTDPNKIQFSIRNIVPRL---------ISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGS
        +FQ   E   KK+   N I     + VP L         + W    VV T FV  +FPFF  ++ LLGAF   P+     +  + A  K+ K S
Subjt:  YFQPTNEVFEKKFTDPNKIQFSIRNIVPRL---------ISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGS

AT5G41800.1 Transmembrane amino acid transporter family protein1.6e-1538.19Show/hide
Query:  FCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGSPCF
        F LLQ+ A+   Y Q   E+ EKK  D  K  FS RN+VPRLI  +L +     F+ AM PFF D+ A++GAFG IP+DF++ M+ YN T+K ++ S  +
Subjt:  FCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGSPCF

Query:  -----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFAN
             +   F C    G        F S    V DA  + LF++
Subjt:  -----LGKQFDCDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATGCCTTTTGCCTTTTGCAAGTTTCAGCTGTCACCAGTAATTACTTTCAACCAACAAACGAAGTATTTGAGAAGAAATTTACAGATCCAAATAAAATTCAATT
TTCGATCCGCAACATTGTGCCGAGATTGATATCGTGGTCATTGTCGGTGGTCGTTGCCACCATTTTTGTTGGAGCAATGTTTCCTTTCTTTAGGGATCTAATGGCACTAT
TGGGAGCATTTGGATGCATTCCTATTGACTTCATCATGGCTATGGTTTTCTACAATGCGACTTTCAAGCTTTCAAAGGGCAGCCCTTGTTTTTTGGGTAAACAGTTTGAT
TGTGACAATTTCTTTGGTGTTGGTGGCCATTGGGGAGTTGGCTTCCATTCCACAAGTTGTAGTGTTGGGGATGCCAAAACTTATACTTTATTTGCTAATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAATGCCTTTTGCCTTTTGCAAGTTTCAGCTGTCACCAGTAATTACTTTCAACCAACAAACGAAGTATTTGAGAAGAAATTTACAGATCCAAATAAAATTCAATT
TTCGATCCGCAACATTGTGCCGAGATTGATATCGTGGTCATTGTCGGTGGTCGTTGCCACCATTTTTGTTGGAGCAATGTTTCCTTTCTTTAGGGATCTAATGGCACTAT
TGGGAGCATTTGGATGCATTCCTATTGACTTCATCATGGCTATGGTTTTCTACAATGCGACTTTCAAGCTTTCAAAGGGCAGCCCTTGTTTTTTGGGTAAACAGTTTGAT
TGTGACAATTTCTTTGGTGTTGGTGGCCATTGGGGAGTTGGCTTCCATTCCACAAGTTGTAGTGTTGGGGATGCCAAAACTTATACTTTATTTGCTAATATGTGA
Protein sequenceShow/hide protein sequence
MTNAFCLLQVSAVTSNYFQPTNEVFEKKFTDPNKIQFSIRNIVPRLISWSLSVVVATIFVGAMFPFFRDLMALLGAFGCIPIDFIMAMVFYNATFKLSKGSPCFLGKQFD
CDNFFGVGGHWGVGFHSTSCSVGDAKTYTLFANM