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Lag0040440 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040440
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:4833640..4835043
RNA-Seq ExpressionLag0040440
SyntenyLag0040440
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50825.1 hypothetical protein EZV62_023349 [Acer yangbiense]7.2e-1946.53Show/hide
Query:  RVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVRCQ
        RV+  GPW+FDKAL++L        I EMCF+ VAFW+QIHN+P+ CMTIE+ + +G  IG ++E+D  G    +G  +RVRVV+++ +PL+R  +V   
Subjt:  RVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVRCQ

Query:  G
        G
Subjt:  G

TXG53122.1 hypothetical protein EZV62_022291 [Acer yangbiense]7.2e-1936.11Show/hide
Query:  LTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVMRVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAK
        L D++  V ++ +  + +  +++  CLV  V+S K+ N DAF+    V   GPW F K+LI+L  L+    IS++ F+   FW+QIH+IPI CM    A+
Subjt:  LTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVMRVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAK

Query:  LIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
         + E+I  + E+  +    W G  MRV+V +DI KPL+R  +++
Subjt:  LIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.9e-2729.56Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+++ D W+ +  T+ E++ + +   K + + +++ LC+VA + +SK+ + +A +SVM                               RV+SSGPWTF+
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR-------------
        K+L++L      +Q  +M F+  AFWIQIHNIP  C++ EMA ++G ++G +EE++ DG   W+GP +RVRV +D++KPL+RG K++             
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR-------------

Query:  -------------------CQ--GAVIDSNGKGEYAYGEWPRATLWKRVVNTQGMEARKMSEELGRKEGMGTGQ
                           C+    V+ +N   +  YG+W RATL K+ V+    E        GR   +  G+
Subjt:  -------------------CQ--GAVIDSNGKGEYAYGEWPRATLWKRVVNTQGMEARKMSEELGRKEGMGTGQ

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]5.1e-2535.29Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+++ + W+ + LT ++ + I +   K L + E++    V  + +SK+ + +AF+SVM                               RV++SGPW+F+
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
         +L++L      DQ  +M F+  A WIQIH IP  CM  +MAK +G  IG +EE+DC+G   W+GP +RVRV +DI+KP +RG KVR
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.3e-2034.22Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+D+   W+ + L  +E   I + + K + + ++I LC V  +  SK+   +AF SVM                               RV S GPWTFD
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
        K+L+IL P    ++  ++  S  AFW+QIH I   CMT +MAK +G  +G +EEVD      W  P + VRV +++ KPL+RG KV+
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

TrEMBL top hitse value%identityAlignment
A0A5C7H214 CCHC-type domain-containing protein3.5e-1946.53Show/hide
Query:  RVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVRCQ
        RV+  GPW+FDKAL++L        I EMCF+ VAFW+QIHN+P+ CMTIE+ + +G  IG ++E+D  G    +G  +RVRVV+++ +PL+R  +V   
Subjt:  RVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVRCQ

Query:  G
        G
Subjt:  G

A0A5C7H9A9 Uncharacterized protein3.5e-1936.11Show/hide
Query:  LTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVMRVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAK
        L D++  V ++ +  + +  +++  CLV  V+S K+ N DAF+    V   GPW F K+LI+L  L+    IS++ F+   FW+QIH+IPI CM    A+
Subjt:  LTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVMRVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAK

Query:  LIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
         + E+I  + E+  +    W G  MRV+V +DI KPL+R  +++
Subjt:  LIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

A0A6J1D765 uncharacterized protein LOC1110179029.1e-2829.56Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+++ D W+ +  T+ E++ + +   K + + +++ LC+VA + +SK+ + +A +SVM                               RV+SSGPWTF+
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR-------------
        K+L++L      +Q  +M F+  AFWIQIHNIP  C++ EMA ++G ++G +EE++ DG   W+GP +RVRV +D++KPL+RG K++             
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR-------------

Query:  -------------------CQ--GAVIDSNGKGEYAYGEWPRATLWKRVVNTQGMEARKMSEELGRKEGMGTGQ
                           C+    V+ +N   +  YG+W RATL K+ V+    E        GR   +  G+
Subjt:  -------------------CQ--GAVIDSNGKGEYAYGEWPRATLWKRVVNTQGMEARKMSEELGRKEGMGTGQ

A0A6J1DP89 uncharacterized protein LOC1110229322.5e-2535.29Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+++ + W+ + LT ++ + I +   K L + E++    V  + +SK+ + +AF+SVM                               RV++SGPW+F+
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
         +L++L      DQ  +M F+  A WIQIH IP  CM  +MAK +G  IG +EE+DC+G   W+GP +RVRV +DI+KP +RG KVR
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

A0A6J1DVS4 uncharacterized protein LOC1110235556.3e-2134.22Show/hide
Query:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD
        M+D+   W+ + L  +E   I + + K + + ++I LC V  +  SK+   +AF SVM                               RV S GPWTFD
Subjt:  MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVM-------------------------------RVMSSGPWTFD

Query:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR
        K+L+IL P    ++  ++  S  AFW+QIH I   CMT +MAK +G  +G +EEVD      W  P + VRV +++ KPL+RG KV+
Subjt:  KALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEMAKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCTTCTTGATCGTTGGCAGAAATGGGTATTGACCGACAAAGAGTCTAAGGTTATCGATGTCGTGGATAGTAAGGTATTGTTTTCCACAGAGGATATTGGATT
GTGTCTAGTGGCGATGGTGATGTCTAGTAAGCAGGCTAATTGTGATGCGTTCCAATCGGTTATGCGAGTGATGAGTTCTGGTCCATGGACTTTTGATAAGGCCCTTATAA
TTTTGAGACCGCTAAAGGAAGATGACCAAATTAGTGAGATGTGCTTCAGTGATGTGGCTTTTTGGATCCAGATTCATAATATCCCAATCAATTGTATGACAATTGAGATG
GCGAAATTGATTGGGGAAGAGATAGGAGTGCTGGAGGAGGTCGACTGTGATGGTGTTAGCACATGGTCAGGTCCGGTTATGAGAGTTAGGGTTGTAGTGGATATTACCAA
ACCACTCCAACGAGGGACGAAGGTTAGATGCCAAGGTGCAGTTATAGATTCTAATGGCAAGGGTGAGTATGCATATGGTGAATGGCCGAGGGCCACGCTCTGGAAGAGGG
TAGTGAATACTCAAGGGATGGAAGCGAGAAAAATGAGTGAAGAGTTGGGCCGAAAGGAGGGGATGGGGACTGGGCAGGATAAGGTGACAAATGAGGGGCATGGGGTTGTG
GTTGGGGGGAATGAGGGTGATGGGGGTGGAGTGATGGATGGGGGTGGAGAAAGATGTGGTGAGAGATGCAAGGAGTGTGGAGGGAGAGATGCGAAAGCAGAAGGGGAAAG
AAGGGAGGGGACGGTTGAGCAAATGGGGAGTGCTGCATTAGGGAGTGGTGAGCAAGCTGGTAGAGTGGCAGCAGGTAGGAAGTGGAAGAGAAGGGCAAGGGAGGAAGGGA
GTGAAATGGGGATGGGAGATTACTCTCAGTTGGGCAAAAGGGCTTGTCATTTGGGGGAGGAGGTGGGACTGTTGGACATGAGTTCGGAAACACAGAGGAAGAGGAATAAG
GTGGATGGAAGAGTGAACGTAGTAAAGGAAGGATCGGTGAGCCCTGATGATCAGAGCCATCAGGGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCTTCTTGATCGTTGGCAGAAATGGGTATTGACCGACAAAGAGTCTAAGGTTATCGATGTCGTGGATAGTAAGGTATTGTTTTCCACAGAGGATATTGGATT
GTGTCTAGTGGCGATGGTGATGTCTAGTAAGCAGGCTAATTGTGATGCGTTCCAATCGGTTATGCGAGTGATGAGTTCTGGTCCATGGACTTTTGATAAGGCCCTTATAA
TTTTGAGACCGCTAAAGGAAGATGACCAAATTAGTGAGATGTGCTTCAGTGATGTGGCTTTTTGGATCCAGATTCATAATATCCCAATCAATTGTATGACAATTGAGATG
GCGAAATTGATTGGGGAAGAGATAGGAGTGCTGGAGGAGGTCGACTGTGATGGTGTTAGCACATGGTCAGGTCCGGTTATGAGAGTTAGGGTTGTAGTGGATATTACCAA
ACCACTCCAACGAGGGACGAAGGTTAGATGCCAAGGTGCAGTTATAGATTCTAATGGCAAGGGTGAGTATGCATATGGTGAATGGCCGAGGGCCACGCTCTGGAAGAGGG
TAGTGAATACTCAAGGGATGGAAGCGAGAAAAATGAGTGAAGAGTTGGGCCGAAAGGAGGGGATGGGGACTGGGCAGGATAAGGTGACAAATGAGGGGCATGGGGTTGTG
GTTGGGGGGAATGAGGGTGATGGGGGTGGAGTGATGGATGGGGGTGGAGAAAGATGTGGTGAGAGATGCAAGGAGTGTGGAGGGAGAGATGCGAAAGCAGAAGGGGAAAG
AAGGGAGGGGACGGTTGAGCAAATGGGGAGTGCTGCATTAGGGAGTGGTGAGCAAGCTGGTAGAGTGGCAGCAGGTAGGAAGTGGAAGAGAAGGGCAAGGGAGGAAGGGA
GTGAAATGGGGATGGGAGATTACTCTCAGTTGGGCAAAAGGGCTTGTCATTTGGGGGAGGAGGTGGGACTGTTGGACATGAGTTCGGAAACACAGAGGAAGAGGAATAAG
GTGGATGGAAGAGTGAACGTAGTAAAGGAAGGATCGGTGAGCCCTGATGATCAGAGCCATCAGGGGCCATGA
Protein sequenceShow/hide protein sequence
MEDLLDRWQKWVLTDKESKVIDVVDSKVLFSTEDIGLCLVAMVMSSKQANCDAFQSVMRVMSSGPWTFDKALIILRPLKEDDQISEMCFSDVAFWIQIHNIPINCMTIEM
AKLIGEEIGVLEEVDCDGVSTWSGPVMRVRVVVDITKPLQRGTKVRCQGAVIDSNGKGEYAYGEWPRATLWKRVVNTQGMEARKMSEELGRKEGMGTGQDKVTNEGHGVV
VGGNEGDGGGVMDGGGERCGERCKECGGRDAKAEGERREGTVEQMGSAALGSGEQAGRVAAGRKWKRRAREEGSEMGMGDYSQLGKRACHLGEEVGLLDMSSETQRKRNK
VDGRVNVVKEGSVSPDDQSHQGP