; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040459 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040459
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein HHL1, chloroplastic
Genome locationchr13:5021490..5022623
RNA-Seq ExpressionLag0040459
SyntenyLag0040459
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061035.1 protein HHL1 [Cucumis melo var. makuwa]7.6e-6188.41Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR  QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

XP_008444407.1 PREDICTED: protein HHL1, chloroplastic [Cucumis melo]7.6e-6188.41Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR  QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

XP_022131326.1 protein HHL1, chloroplastic isoform X2 [Momordica charantia]2.2e-6087.86Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
        MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ+RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL

Query:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

XP_038884174.1 protein HHL1, chloroplastic isoform X1 [Benincasa hispida]6.9e-6289.13Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        MEVAMSLNALVR+PLSNSKL EDGLVRHSLFSART+QKP+QRHR   +VEAKGK+GMQ+RQ QR +PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

XP_038884175.1 protein HHL1, chloroplastic isoform X2 [Benincasa hispida]6.9e-6289.13Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        MEVAMSLNALVR+PLSNSKL EDGLVRHSLFSART+QKP+QRHR   +VEAKGK+GMQ+RQ QR +PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

TrEMBL top hitse value%identityAlignment
A0A1S3BA84 protein HHL1, chloroplastic3.7e-6188.41Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR  QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

A0A5A7V5E5 Protein HHL13.7e-6188.41Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        M+VAMSLNALVRLPLSNSKLHEDGLVRHSLFSART+ KP+  +R+AF+VEAKGK+GMQSR  QR  PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

A0A6J1BP87 protein HHL1, chloroplastic isoform X21.1e-6087.86Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
        MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ+RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL

Query:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

A0A6J1BPD0 protein HHL1, chloroplastic isoform X11.1e-6087.86Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
        MEVAMSLNALVRLPLSNS+L +DGLVRHSL SART QKP+QRHR    F+VEAKGK+GMQ+RQ QRA+PPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHR--QAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSL

Query:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  INGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

A0A6J1KDM2 protein HHL1, chloroplastic-like isoform X23.1e-6086.23Show/hide
Query:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN
        MEVAMSLNALVRLPLSNSKL EDG VRHSLFS+RT+QKP++RHR  F+VEAKGK+GMQ+R+ Q+A+PPPLPKIEDDGNPKFVIFIR A+VYLWYPLSLIN
Subjt:  MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLIN

Query:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYR  K
Subjt:  GGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

SwissProt top hitse value%identityAlignment
Q8LDL0 Protein HHL1, chloroplastic1.4e-4973.05Show/hide
Query:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS
        MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS
Subjt:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS

Query:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        +I GGTTAKIMVAAKDN LGKYIYKDT+ARN+AAVIYR  K
Subjt:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

Arabidopsis top hitse value%identityAlignment
AT1G67700.1 unknown protein9.9e-5173.05Show/hide
Query:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS
        MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS
Subjt:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS

Query:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        +I GGTTAKIMVAAKDN LGKYIYKDT+ARN+AAVIYR  K
Subjt:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

AT1G67700.2 unknown protein9.9e-5173.05Show/hide
Query:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS
        MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS
Subjt:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS

Query:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        +I GGTTAKIMVAAKDN LGKYIYKDT+ARN+AAVIYR  K
Subjt:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK

AT1G67700.3 unknown protein9.9e-5173.05Show/hide
Query:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS
        MEV+MSLNAL RLPL N+ +  E GL RHSLFS+RT   +   Q+ R  F+VEAKGK+GM +RQ QR +PPP+PKIEDDGNP+FVIFIRMANVYLWYPLS
Subjt:  MEVAMSLNALVRLPLSNS-KLHEDGLVRHSLFSARTI--QKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLS

Query:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK
        +I GGTTAKIMVAAKDN LGKYIYKDT+ARN+AAVIYR  K
Subjt:  LINGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYRVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCGCCATGTCTCTCAACGCTCTGGTTCGACTTCCCCTTTCCAATTCCAAGCTACACGAAGATGGGCTGGTCCGCCACTCGCTCTTCTCCGCGAGGACCATTCA
GAAGCCCGACCAGAGGCATCGCCAAGCTTTTCTCGTCGAAGCGAAGGGCAAAAGAGGGATGCAGTCTCGCCAGGTTCAAAGGGCTTCGCCTCCACCGCTGCCCAAGATTG
AAGACGACGGCAACCCTAAATTCGTTATCTTCATCCGTATGGCCAATGTTTATCTATGGTACCCGCTGAGTCTTATAAATGGTGGCACGACCGCCAAAATCATGGTTGCT
GCAAAAGATAATTTTCTTGGGAAATATATCTATAAAGATACTCTGGCCAGGAATCTTGCTGCTGTTATTTACCGGGTAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGA
AGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAATCAGTCGCCGGCGGCCGGCGGCCGGCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAA
GAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCGCCATGTCTCTCAACGCTCTGGTTCGACTTCCCCTTTCCAATTCCAAGCTACACGAAGATGGGCTGGTCCGCCACTCGCTCTTCTCCGCGAGGACCATTCA
GAAGCCCGACCAGAGGCATCGCCAAGCTTTTCTCGTCGAAGCGAAGGGCAAAAGAGGGATGCAGTCTCGCCAGGTTCAAAGGGCTTCGCCTCCACCGCTGCCCAAGATTG
AAGACGACGGCAACCCTAAATTCGTTATCTTCATCCGTATGGCCAATGTTTATCTATGGTACCCGCTGAGTCTTATAAATGGTGGCACGACCGCCAAAATCATGGTTGCT
GCAAAAGATAATTTTCTTGGGAAATATATCTATAAAGATACTCTGGCCAGGAATCTTGCTGCTGTTATTTACCGGGTAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGA
AGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAATCAGTCGCCGGCGGCCGGCGGCCGGCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAA
GAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA
Protein sequenceShow/hide protein sequence
MEVAMSLNALVRLPLSNSKLHEDGLVRHSLFSARTIQKPDQRHRQAFLVEAKGKRGMQSRQVQRASPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSLINGGTTAKIMVA
AKDNFLGKYIYKDTLARNLAAVIYRVRKRREEERKEEEERRKKKKKKKSVAGGRRPAAAAACGGRRSPDLGRRRRRREKMEKKEDGEEEDEREGEKE