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Lag0040533 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040533
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCSC1-like protein
Genome locationchr13:5716410..5718644
RNA-Seq ExpressionLag0040533
SyntenyLag0040533
Gene Ontology termsGO:0098655 - cation transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005227 - calcium activated cation channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012886.1 CSC1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1590Show/hide
Query:  LEAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
        +EAMENDELDEKS +LEVNY KAADAYCLPCLQPPDFLLASV+TSTQPLV
Subjt:  LEAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
XP_023542236.1 CSC1-like protein At3g54510 [Cucurbita pepo subsp. pepo]8.8e-1692Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
        EAMENDELDEKS +LEVNY KAADAYCLPCLQPPDFLLASV+TSTQPLVI
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
XP_038893316.1 CSC1-like protein At3g54510 isoform X1 [Benincasa hispida]1.6e-1798Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
        EAMENDELD+KSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
XP_038893317.1 CSC1-like protein At3g54510 isoform X2 [Benincasa hispida]5.5e-1892.45Show/hide
Query:  YNLEAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
        Y ++AMENDELD+KSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
Subjt:  YNLEAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
XP_038893318.1 CSC1-like protein At3g54510 isoform X3 [Benincasa hispida]1.6e-1798Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
        EAMENDELD+KSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
TrEMBL top hitse value%identityAlignment
A0A5A7SZV2 CSC1-like protein1.2e-1593.88Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
        EAMENDELDEKS+ELEVNYE AADAYCLPCLQPPDFLLASVSTSTQ LV
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
A0A5D3CDL9 CSC1-like protein1.2e-1593.88Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
        EAMENDELDEKS+ELEVNYE AADAYCLPCLQPPDFLLASVSTSTQ LV
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
A0A6J1FZF5 CSC1-like protein At3g54510 isoform X11.2e-1591.84Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
        EAMENDELDEKS +LEVNY KAADAYCLPCLQPPDFLLASV+TSTQPLV
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLV
A0A6J1FZJ3 CSC1-like protein At3g54510 isoform X22.8e-1591.67Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPL
        EAMENDELDEKS +LEVNY KAADAYCLPCLQPPDFLLASV+TSTQPL
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPL
A0A6J1HPW4 CSC1-like protein At3g545102.1e-1590Show/hide
Query:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
        EAMENDELDE S +LEVNY KAADAYCLPCLQPPDFLLASV+TSTQPLVI
Subjt:  EAMENDELDEKSNELEVNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATGGATCCAGGAAGTTTGTTGGCTTCAGCGGCCATTAACATTGGCTTGGCCTTCACAGTCCTCTCCATCTTCTACATCCTCAAGTAGCAGCCCGCCATTTAT
TACGCTCGCCGGCTCTTCCTCGGCCACCGCGTTTCATTTGAACCTTTCACTTTCCGTCGACTGGATTCCTCGGAAGAGTACTCTTCCGGTGGCCTTGACGCCCTCATTAC
CATCAGACTCCTCAAGCTCAGCTTTACAATTGGATGGAGTATGGAAGACCACCTATAATCTGGAGGCTATGGAGAATGATGAACTTGATGAAAAGAGCAATGAATTGGAA
GTTAACTATGAAAAGGCAGCCGATGCTTATTGCCTGCCCTGCCTGCAACCTCCGGACTTCTTACTGGCATCAGTGTCAACCTCCACACAGCCATTGGTAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATGGATCCAGGAAGTTTGTTGGCTTCAGCGGCCATTAACATTGGCTTGGCCTTCACAGTCCTCTCCATCTTCTACATCCTCAAGTAGCAGCCCGCCATTTAT
TACGCTCGCCGGCTCTTCCTCGGCCACCGCGTTTCATTTGAACCTTTCACTTTCCGTCGACTGGATTCCTCGGAAGAGTACTCTTCCGGTGGCCTTGACGCCCTCATTAC
CATCAGACTCCTCAAGCTCAGCTTTACAATTGGATGGAGTATGGAAGACCACCTATAATCTGGAGGCTATGGAGAATGATGAACTTGATGAAAAGAGCAATGAATTGGAA
GTTAACTATGAAAAGGCAGCCGATGCTTATTGCCTGCCCTGCCTGCAACCTCCGGACTTCTTACTGGCATCAGTGTCAACCTCCACACAGCCATTGGTAATTTGA
Protein sequenceShow/hide protein sequence
MAKWIQEVCWLQRPLTLAWPSQSSPSSTSSSSSPPFITLAGSSSATAFHLNLSLSVDWIPRKSTLPVALTPSLPSDSSSSALQLDGVWKTTYNLEAMENDELDEKSNELE
VNYEKAADAYCLPCLQPPDFLLASVSTSTQPLVI