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Lag0040557 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040557
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein kinase domain containing protein, expressed
Genome locationchr13:6002566..6004591
RNA-Seq ExpressionLag0040557
SyntenyLag0040557
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA94760.1 Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group]7.2e-0635.45Show/hide
Query:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR
        V  SF     +GG+G I RD+SGS++    K L S  +    E++A +EGL   I    +   P    +++E+D +S+VNLL E + D+S+++ L++EI+
Subjt:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR

Query:  NLEMNFKEVL
         L    +EVL
Subjt:  NLEMNFKEVL

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]8.5e-0735.64Show/hide
Query:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNLE
        S+   + +GGV W+  DS GSSIC++ K L  +W +KMLE KA++EGLK+ + +     + SH  +I     + +  +LN    D+ ++S +++EI +LE
Subjt:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNLE

Query:  M
        +
Subjt:  M

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.6e-0536Show/hide
Query:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFG-FNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNL
        S+  S+ RGG+GWI R   G  +    + + +  ++K+LE  A+LEGL+   ++ N G   P H    +E+D+  V +LLN + ED++K  +++EEI NL
Subjt:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFG-FNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNL

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]7.2e-0635.45Show/hide
Query:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR
        V  SF     +GG+G I RD+SGS++    K L S  +    E++A +EGL   I    +   P    +++E+D +S+VNLL E + D+S+++ L++EI+
Subjt:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR

Query:  NLEMNFKEVL
         L    +EVL
Subjt:  NLEMNFKEVL

TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224037.8e-0636Show/hide
Query:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFG-FNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNL
        S+  S+ RGG+GWI R   G  +    + + +  ++K+LE  A+LEGL+   ++ N G   P H    +E+D+  V +LLN + ED++K  +++EEI NL
Subjt:  SFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFG-FNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNL

Q2R147 Protein kinase domain containing protein, expressed3.5e-0635.45Show/hide
Query:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR
        V  SF     +GG+G I RD+SGS++    K L S  +    E++A +EGL   I    +   P    +++E+D +S+VNLL E + D+S+++ L++EI+
Subjt:  VSDSFHGSSRRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIR

Query:  NLEMNFKEVL
         L    +EVL
Subjt:  NLEMNFKEVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAATTTCCAAAAATTGGTCAATTAAAGTTCTTGAAACCAAAGCTTTGCTCGAGGGATTGAAAGAGATCAGTGATACCTGCAATTGCCGCTCTATCTTTCTTGA
AGTGGAAATCGACAATCTCGAAGTCGCCAATGCCTTGATCGAAAAATCAGAGGACATCTCGAATATGAAGACCTTCACCGATCAAATCAAGGACCTAGCTTCGAAGTCGT
TCGACATGAAATTTCGTCATTGCAGTAGATTTTTTAACACAGACGCGTACTGTGTTGTGAGGAAAGCCATGGATCTCTCTTTTGTTTCTGATTCATTCCATGGAAGCAGT
CGAAGAGGCGGCGTTGGTTGGATCCCCCGTGACTCATCAGGGTCTTCGATTTGCTTGGACTTTAAACGCTTGTTCAGCAGGTGGTCTATTAAAATGCTGGAGGTGAAGGC
TGTCCTTGAAGGCCTGAAATCCGCCATTTCGGTTGCAAATTTTGGTTTTAATCCGAGCCACCTTTCGCTGATAGTGGAATCAGATGCAATCTCTGTAGTTAATCTCCTGA
ACGAGGAAGACGAAGACATCTCTAAGATCTCCTTCCTGATTGAGGAGATCAGAAATCTGGAAATGAATTTCAAGGAGGTCCTTTTTGTTTTGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAATTTCCAAAAATTGGTCAATTAAAGTTCTTGAAACCAAAGCTTTGCTCGAGGGATTGAAAGAGATCAGTGATACCTGCAATTGCCGCTCTATCTTTCTTGA
AGTGGAAATCGACAATCTCGAAGTCGCCAATGCCTTGATCGAAAAATCAGAGGACATCTCGAATATGAAGACCTTCACCGATCAAATCAAGGACCTAGCTTCGAAGTCGT
TCGACATGAAATTTCGTCATTGCAGTAGATTTTTTAACACAGACGCGTACTGTGTTGTGAGGAAAGCCATGGATCTCTCTTTTGTTTCTGATTCATTCCATGGAAGCAGT
CGAAGAGGCGGCGTTGGTTGGATCCCCCGTGACTCATCAGGGTCTTCGATTTGCTTGGACTTTAAACGCTTGTTCAGCAGGTGGTCTATTAAAATGCTGGAGGTGAAGGC
TGTCCTTGAAGGCCTGAAATCCGCCATTTCGGTTGCAAATTTTGGTTTTAATCCGAGCCACCTTTCGCTGATAGTGGAATCAGATGCAATCTCTGTAGTTAATCTCCTGA
ACGAGGAAGACGAAGACATCTCTAAGATCTCCTTCCTGATTGAGGAGATCAGAAATCTGGAAATGAATTTCAAGGAGGTCCTTTTTGTTTTGCCCTAG
Protein sequenceShow/hide protein sequence
MQKISKNWSIKVLETKALLEGLKEISDTCNCRSIFLEVEIDNLEVANALIEKSEDISNMKTFTDQIKDLASKSFDMKFRHCSRFFNTDAYCVVRKAMDLSFVSDSFHGSS
RRGGVGWIPRDSSGSSICLDFKRLFSRWSIKMLEVKAVLEGLKSAISVANFGFNPSHLSLIVESDAISVVNLLNEEDEDISKISFLIEEIRNLEMNFKEVLFVLP