CuGenDBv2

Gene ID	Lag0040567
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome location	chr13:6115770..6116476
RNA-Seq Expression	Lag0040567
Synteny	Lag0040567
Gene Ontology terms	GO:0000413 - protein peptidyl-prolyl isomerization (biological process) GO:0006457 - protein folding (biological process) GO:0006979 - response to oxidative stress (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component) GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domains	IPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8648872.1 hypothetical protein Csa_008170 [Cucumis sativus]

3.9e-27

82.67

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDV  +SQLRS +ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

XP_004142382.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis sativus]

3.9e-27

82.67

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDV  +SQLRS +ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]

2.3e-27

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]

3.0e-27

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDV  ISQ+RST+ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]

2.3e-27

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRV0 Uncharacterized protein

1.9e-27

82.67

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR+RVFDFFRSACRSLP IMDIYNLDDV  +SQLRS +ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

1.1e-27

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFTVR LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSH+TDPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

A0A2N9HW32 Uncharacterized protein

7.1e-27

81.33

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFT+R++KVPPNSASLEEAR RVFDFFRSACRS+PTIMDIYNLDDV  ISQLRST+A+EIRKNSHIT+PK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

A0A5A7SZJ9 Peptidyl-prolyl cis-trans isomerase CYP22 isoform X1

2.4e-27

87.5

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKI
        MAFTVR LKVPPNSASLEEAR RVFDFFRSACRSLP IMDIYNLDDV  +SQLRST+ASEIRKNSH+TDPK+
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKI

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

3.2e-27

85.33

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Query:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        MAFT RALKVPPNSASLEEAR RVFDFFRSACRSLPTIMDIYNLDDV  ISQLRS+VAS+IRKNSHI DPK++ +
Subjt:  MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

SwissProt top hits

e value

%identity

Alignment

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

1.6e-04

31.88

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Query:  PPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSLFACR
        P  S  + EA+ RV + +R+  R +P  + ++ LD  + + Q R  V    +KN+HITDP+++ L   +
Subjt:  PPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSLFACR

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

1.7e-22

67.12

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Query:  FTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DVV  SQLR  ++++IR N+HITDPK++ L
Subjt:  FTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

Arabidopsis top hits

e value

%identity

Alignment

AT3G12260.1 LYR family of Fe/S cluster biogenesis protein

1.2e-23

67.12

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Query:  FTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+PTIMDIYNL DVV  SQLR  ++++IR N+HITDPK++ L
Subjt:  FTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSL

Sequences

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CDS sequence

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ATGGCATTCACAGTTCGAGCTCTGAAGGTTCCGCCGAACTCCGCGAGTCTAGAAGAGGCCCGGGCTCGAGTCTTCGACTTCTTCAGATCAGCATGTCGATCGTTGCCAAC
AATCATGGACATTTACAATCTAGATGATGTCGTTAAAATCTCTCAGCTCCGCTCTACCGTCGCCTCCGAGATCCGCAAGAATTCCCACATCACGGACCCTAAGATATTGA
GCCTTTTTGCCTGTAGATGCAGTGGTCGCCCACTGCTAGTCTTGTTTAATTGCGATCCCTCTGTATACATTAGAGTCGCATCAGACTTGTTGAAGTTTGATGAGATTGCT
CTCCTATGA

mRNA sequence

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Protein sequence

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MAFTVRALKVPPNSASLEEARARVFDFFRSACRSLPTIMDIYNLDDVVKISQLRSTVASEIRKNSHITDPKILSLFACRCSGRPLLVLFNCDPSVYIRVASDLLKFDEIA
LL

Lag0040567 (gene) of Sponge gourd (AG-4) v1 genome