CuGenDBv2

Gene ID	Lag0040580
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Mitochondrial import inner membrane translocase subunit
Genome location	chr13:6224479..6225542
RNA-Seq Expression	Lag0040580
Synteny	Lag0040580
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005758 - mitochondrial intermembrane space (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR004217 - Tim10-like IPR035427 - Tim10-like domain superfamily IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13

Homology

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GenBank top hits

e value

%identity

Alignment

GFZ03926.1 translocase inner membrane subunit 8 [Actinidia rufa]

6.4e-10

67.92

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Query:  RKRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        +K  ++    EMVAKLT+VCWDKCIT T GSKFSSSES+CLSNCAQRY   S+
Subjt:  RKRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

KAF7136316.1 hypothetical protein RHSIM_Rhsim08G0194200 [Rhododendron simsii]

2.9e-10

71.15

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Query:  KRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        K  ++    EMVAKLTSVCWDKC+T T GSKFSSSES+CLSNCAQRY   SL
Subjt:  KRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

KAG5537253.1 hypothetical protein RHGRI_024639 [Rhododendron griersonianum]

2.2e-10

69.81

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Query:  RKRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        +K  ++    EMVAKLTSVCWDKC+T T GSKFSSSES+CLSNCAQRY   SL
Subjt:  RKRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

XP_008464391.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo]

7.5e-11

86.36

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT T GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

XP_022135207.1 mitochondrial import inner membrane translocase subunit TIM8 [Momordica charantia]

2.2e-10

84.09

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT + GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTY7 Mitochondrial import inner membrane translocase subunit

3.6e-11

86.36

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT T GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

A0A1S3CLD0 Mitochondrial import inner membrane translocase subunit

3.6e-11

86.36

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT T GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

A0A6J1C212 Mitochondrial import inner membrane translocase subunit

1.1e-10

84.09

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT + GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

A0A6J1E0G1 Mitochondrial import inner membrane translocase subunit

3.6e-11

86.36

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT T GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

A0A6J1IHF0 Mitochondrial import inner membrane translocase subunit

3.6e-11

86.36

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Query:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        AEMVAKLTSVCWDKCIT T GSKFSSSESNCLSNCAQRY   S+
Subjt:  AEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

SwissProt top hits

e value

%identity

Alignment

P0CR94 Mitochondrial import inner membrane translocase subunit TIM8

3.7e-05

51.22

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Query:  VAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        + +LT+ CW+ CIT  + SKFS SE+ CL NC  R+  SSL
Subjt:  VAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

P0CR95 Mitochondrial import inner membrane translocase subunit TIM8

3.7e-05

51.22

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Query:  VAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL
        + +LT+ CW+ CIT  + SKFS SE+ CL NC  R+  SSL
Subjt:  VAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSL

Q9XGY4 Mitochondrial import inner membrane translocase subunit TIM8

1.0e-10

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Query:  EMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSLNDSKTVN
        EMV+K+TSVCWDKCIT   GSKFSSSES+CL++CAQRY   S+   K  N
Subjt:  EMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSLNDSKTVN

Arabidopsis top hits

e value

%identity

Alignment

AT5G50810.1 translocase inner membrane subunit 8

7.2e-12

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Query:  EMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSLNDSKTVN
        EMV+K+TSVCWDKCIT   GSKFSSSES+CL++CAQRY   S+   K  N
Subjt:  EMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSLNDSKTVN

Sequences

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CDS sequence

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ATGTCGTTGGACATCGTTTGCGCGTTCTCAAAGCAACTCACCAAGAGGAAGAGAAGCAAAGAGCTATGCTTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGA
CAAGTGTATCACTGATACGCTAGGGAGTAAGTTCAGCTCTAGTGAATCCAACTGCCTATCAAACTGTGCCCAACGCTACTGCTCATCATCATTAAACGATTCCAAAACAG
TTAATGGATCTATTGTTACATTCAATCTGAAGGAAAAAGGGTCTGAACTTCTGAAAATATTGTTCACTTTTTAA

mRNA sequence

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Protein sequence

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MSLDIVCAFSKQLTKRKRSKELCFAEMVAKLTSVCWDKCITDTLGSKFSSSESNCLSNCAQRYCSSSLNDSKTVNGSIVTFNLKEKGSELLKILFTF

Lag0040580 (gene) of Sponge gourd (AG-4) v1 genome