; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040609 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040609
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmediator of RNA polymerase II transcription subunit 15a-like
Genome locationchr13:6533019..6536992
RNA-Seq ExpressionLag0040609
SyntenyLag0040609
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601093.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]3.4e-14573.99Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAY K + MLPGL  NG  D+E A ++F  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW
        SASVSDI S+VCMTDRVSSSAPLNKSK A+G DL G V SRLRR CSRFGGTIGSRRTR+YR          LMDCEGFDL+S+FTQ SR +ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD  ATI RSEGI VECSF A+ T S+LIS+QT  +QLA+HPLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISEVARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

XP_022138947.1 mediator of RNA polymerase II transcription subunit 15a-like isoform X1 [Momordica charantia]1.5e-15376.67Show/hide
Query:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL
        M+PGLP NGRAD E  AWDDF   QRG +SHQ+VNDAV +EK FIISTPGMSPS LLEEV+ESDR+N IC V+PLQRL+K+VNVMSPKALSAS+SDI S+
Subjt:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL

Query:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL
        VCMTDRV+SSAPLNKSKA I  DLVG V SRLR+ CS FGG+ GSRRTR+ R+ RMY SSRR+M CE +DLNS FT+ SR+ETPEH HW GFSLP KQ L
Subjt:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL

Query:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVEDCPTDCEDLSL
        LEEIR+INEQLIDTVVS+CDKDM TTD  AT DRSEGI VECSF AM  +SN ISQQ   LQL VHPLKLLVPKGYPH SPIF K  +E CPTDCE+LSL
Subjt:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVEDCPTDCEDLSL

Query:  KAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA
        K REKFNM VRSLPHPF+ISEVARTWD CAREVVSE+A+RNGGGSF+SKYGSWEDCLH A
Subjt:  KAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA

XP_022956517.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata]4.4e-14573.99Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAY K + MLPGL  NG  D+E A ++F  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW
        SASVSDI S+VCMTDRVSSSAPLNKSK A+G DL G V SRLRR CSRFGGTIGSRRTR+YR          LMDCEGFDL+S+FTQ SR +ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD  ATI RSEGI VECSF A+ T S+LIS QT  +QLA+HPLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISEVARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

XP_022984739.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita maxima]3.4e-14573.73Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAYRK + MLPGL  NG  D+E A +DF  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW
        SASVSDI S+VCMTDRVSSSAPLNKSK A+G DL G V SRLRR CSRFGGTIGSRRTR+YR          LMDCEGFDL+S+FTQ SR +ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD  ATI +SEGI VECSF A+ T S+LIS QT  +QLA+ PLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISE+ARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

XP_023526658.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]7.5e-14573.73Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAYRK + MLPGL  NG  D+E A ++F  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRV-ETPEHLHW
        SASVSDI S+VCMTDRV SSAPLNKSK A+G DL G V SRLRR CSRFGGT GSRRTR+YR          LMDCEGFDL+S+FTQ SR+ ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRV-ETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD+ ATI RSEGI VECSF A+ T S+LIS QT  +QLA+HPLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISEVARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

TrEMBL top hitse value%identityAlignment
A0A5B6ZEQ7 Putative mediator of RNA polymerase II transcription subunit 15a (Fragment)2.9e-6546.76Show/hide
Query:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESD--RENAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS
        GN+ H     A+   ++  I TPG+S S LL E T  D    NA   VS        PL+RLIKVV  MSPKALSASVSDI S+V M DR++ SAP N S
Subjt:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESD--RENAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS

Query:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSA----------RMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSLLEEIR
        +AA+G DLV   + RL+ RN +   GT G+R+ R Y SA           +  S ++L   E  DL S  T TS ++ P         +    +LLEEIR
Subjt:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSA----------RMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSLLEEIR

Query:  RINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKARE
         IN+QLIDTVV I D+D+    T A  +  EG  V+CSF A+  + NL SQ        + PL+LLVP  YP+ SPI   KF +E    + EDLS+KA+ 
Subjt:  RINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKARE

Query:  KFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA
        +F++S+RSL  P ++ E+ARTWDVCAR V+SEYA+++GGGSFSSKYGSWE CL A
Subjt:  KFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA

A0A6J1CCM7 mediator of RNA polymerase II transcription subunit 15a-like isoform X17.3e-15476.67Show/hide
Query:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL
        M+PGLP NGRAD E  AWDDF   QRG +SHQ+VNDAV +EK FIISTPGMSPS LLEEV+ESDR+N IC V+PLQRL+K+VNVMSPKALSAS+SDI S+
Subjt:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL

Query:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL
        VCMTDRV+SSAPLNKSKA I  DLVG V SRLR+ CS FGG+ GSRRTR+ R+ RMY SSRR+M CE +DLNS FT+ SR+ETPEH HW GFSLP KQ L
Subjt:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL

Query:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVEDCPTDCEDLSL
        LEEIR+INEQLIDTVVS+CDKDM TTD  AT DRSEGI VECSF AM  +SN ISQQ   LQL VHPLKLLVPKGYPH SPIF K  +E CPTDCE+LSL
Subjt:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVEDCPTDCEDLSL

Query:  KAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA
        K REKFNM VRSLPHPF+ISEVARTWD CAREVVSE+A+RNGGGSF+SKYGSWEDCLH A
Subjt:  KAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA

A0A6J1CEI3 mediator of RNA polymerase II transcription subunit 15a-like isoform X29.7e-11474.39Show/hide
Query:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL
        M+PGLP NGRAD E  AWDDF   QRG +SHQ+VNDAV +EK FIISTPGMSPS LLEEV+ESDR+N IC V+PLQRL+K+VNVMSPKALSAS+SDI S+
Subjt:  MLPGLPGNGRADYEA-AWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSL

Query:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL
        VCMTDRV+SSAPLNKSKA I  DLVG V SRLR+ CS FGG+ GSRRTR+ R+ RMY SSRR+M CE +DLNS FT+ SR+ETPEH HW GFSLP KQ L
Subjt:  VCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSRVETPEHLHWHGFSLPVKQSL

Query:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        LEEIR+INEQLIDTVVS+CDKDM TTD  AT DRSEGI VECSF AM  +SN ISQQ   LQL VHPLKLLVPKGYPH SPIF K  +E
Subjt:  LEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

A0A6J1GWK1 mediator of RNA polymerase II transcription subunit 15a-like2.1e-14573.99Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAY K + MLPGL  NG  D+E A ++F  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW
        SASVSDI S+VCMTDRVSSSAPLNKSK A+G DL G V SRLRR CSRFGGTIGSRRTR+YR          LMDCEGFDL+S+FTQ SR +ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD  ATI RSEGI VECSF A+ T S+LIS QT  +QLA+HPLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISEVARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

A0A6J1JBE6 mediator of RNA polymerase II transcription subunit 15a-like1.6e-14573.73Show/hide
Query:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL
        F KLAYRK + MLPGL  NG  D+E A +DF  P        +VNDA   EKAFI+STPGMSPS+LLEEVT+SDR+N  CCV+PLQRLIK+VNVMSPKAL
Subjt:  FGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRENAICCVSPLQRLIKVVNVMSPKAL

Query:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW
        SASVSDI S+VCMTDRVSSSAPLNKSK A+G DL G V SRLRR CSRFGGTIGSRRTR+YR          LMDCEGFDL+S+FTQ SR +ETP+H +W
Subjt:  SASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIFTQTSR-VETPEHLHW

Query:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE
        HGFSLPVKQSLLEEIRRINEQLI T VSICDKDM TTD  ATI +SEGI VECSF A+ T S+LIS QT  +QLA+ PLKLLVP GYPHISPIFK   +E
Subjt:  HGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPIFKKFHVE

Query:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS
         CPT CEDLSL+AREKFNMSVRSL HPF+ISE+ARTWD+CAR+V+SEYA +NGGGSFSSKYGSWEDCLH AWS
Subjt:  DCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS

SwissProt top hitse value%identityAlignment
F4I169 Probable mediator of RNA polymerase II transcription subunit 15b6.2e-0936.15Show/hide
Query:  DDFFCPQRGNMSHQMVNDAVHQEKAFI-----ISTPGMSPSTLLEEVTESDRE-----NAICCVS-----PLQRLIKVVNVMSPKALSASVSDISSLVCM
        DD    Q  +MS Q     V Q +  +     I TPG+S S LL E+T  D        + C  S     P++RLI+ +  +SP+ALS++V DI S+V M
Subjt:  DDFFCPQRGNMSHQMVNDAVHQEKAFI-----ISTPGMSPSTLLEEVTESDRE-----NAICCVS-----PLQRLIKVVNVMSPKALSASVSDISSLVCM

Query:  TDRVSSSAPLNKSKAAIGGDLVGAVESRLR
         DR++ S P   S+A+ G DLV   +  L+
Subjt:  TDRVSSSAPLNKSKAAIGGDLVGAVESRLR

F4I171 Mediator of RNA polymerase II transcription subunit 15a3.4e-4737.25Show/hide
Query:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRE--NAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS
        GN++ Q         ++  I TPG+S S LL+E T  D    N+    S        P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S
Subjt:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRE--NAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS

Query:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIF-TQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDT
        +A++G DLV   + RL+ RN     G + +++ + + +A M  S   L    G +      ++TS +E+             + +LLEEI+ IN++LIDT
Subjt:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIF-TQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDT

Query:  VVSICDKDMRTTDTTATIDR--SEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISP-IFKKFHVEDCPTDCEDLSLKAREKFNMSVR
        VV I D +     +   I     EG TV  SF+A+  +  L +  +      + PL+LLVP  YP+ SP +  K  VE    + EDLS KA  +FN+ +R
Subjt:  VVSICDKDMRTTDTTATIDR--SEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISP-IFKKFHVEDCPTDCEDLSLKAREKFNMSVR

Query:  SLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA
        SL  P ++ ++A+TWD CAR V+ EYA++ GGG+FSSKYG+WE  + A+
Subjt:  SLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA

Q9SHV7 Probable mediator of RNA polymerase II transcription subunit 15c1.3e-3033.22Show/hide
Query:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF
        P+ RLIK     SPK+L+ SVS+ISS++ M D +  S P +  S+A +G DL                    S RTRN+ +      S+R+   ++    
Subjt:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF

Query:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTP-V
        D++S    + Q S +E+ E +      L V       +LL+EI+  N +L++TVV ICD+D   T  T T      + +  +F   + +  +I   +  +
Subjt:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTP-V

Query:  LQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA
        +Q  + PL+LL P  YP+ SPI  ++   +      EDLS + R +F++S++    P     +A+TW+ CAR  + EYAER+GGG+FSSKYG+WE  L A
Subjt:  LQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA

Query:  A
        +
Subjt:  A

Arabidopsis top hitse value%identityAlignment
AT1G15770.1 unknown protein4.4e-1036.15Show/hide
Query:  DDFFCPQRGNMSHQMVNDAVHQEKAFI-----ISTPGMSPSTLLEEVTESDRE-----NAICCVS-----PLQRLIKVVNVMSPKALSASVSDISSLVCM
        DD    Q  +MS Q     V Q +  +     I TPG+S S LL E+T  D        + C  S     P++RLI+ +  +SP+ALS++V DI S+V M
Subjt:  DDFFCPQRGNMSHQMVNDAVHQEKAFI-----ISTPGMSPSTLLEEVTESDRE-----NAICCVS-----PLQRLIKVVNVMSPKALSASVSDISSLVCM

Query:  TDRVSSSAPLNKSKAAIGGDLVGAVESRLR
         DR++ S P   S+A+ G DLV   +  L+
Subjt:  TDRVSSSAPLNKSKAAIGGDLVGAVESRLR

AT1G15780.1 unknown protein2.4e-4837.25Show/hide
Query:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRE--NAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS
        GN++ Q         ++  I TPG+S S LL+E T  D    N+    S        P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S
Subjt:  GNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTESDRE--NAICCVS--------PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKS

Query:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIF-TQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDT
        +A++G DLV   + RL+ RN     G + +++ + + +A M  S   L    G +      ++TS +E+             + +LLEEI+ IN++LIDT
Subjt:  KAAIGGDLVGAVESRLR-RNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLNSIF-TQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDT

Query:  VVSICDKDMRTTDTTATIDR--SEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISP-IFKKFHVEDCPTDCEDLSLKAREKFNMSVR
        VV I D +     +   I     EG TV  SF+A+  +  L +  +      + PL+LLVP  YP+ SP +  K  VE    + EDLS KA  +FN+ +R
Subjt:  VVSICDKDMRTTDTTATIDR--SEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISP-IFKKFHVEDCPTDCEDLSLKAREKFNMSVR

Query:  SLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA
        SL  P ++ ++A+TWD CAR V+ EYA++ GGG+FSSKYG+WE  + A+
Subjt:  SLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA

AT2G10440.1 unknown protein9.1e-3233.22Show/hide
Query:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF
        P+ RLIK     SPK+L+ SVS+ISS++ M D +  S P +  S+A +G DL                    S RTRN+ +      S+R+   ++    
Subjt:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF

Query:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTP-V
        D++S    + Q S +E+ E +      L V       +LL+EI+  N +L++TVV ICD+D   T  T T      + +  +F   + +  +I   +  +
Subjt:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTP-V

Query:  LQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA
        +Q  + PL+LL P  YP+ SPI  ++   +      EDLS + R +F++S++    P     +A+TW+ CAR  + EYAER+GGG+FSSKYG+WE  L A
Subjt:  LQLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHA

Query:  A
        +
Subjt:  A

AT2G10440.2 unknown protein5.9e-3134Show/hide
Query:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF
        P+ RLIK     SPK+L+ SVS+ISS++ M D +  S P +  S+A +G DL                    S RTRN+ +      S+R+   ++    
Subjt:  PLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLN-KSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRL---MDCEGF

Query:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVL
        D++S    + Q S +E+ E +      L V       +LL+EI+  N +L++TVV ICD+D   T  T T      + +  +F   H  S  I+Q     
Subjt:  DLNS---IFTQTSRVETPEHLHWHGFSLPVKQ-----SLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVL

Query:  QLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA
           + PL+LL P  YP+ SPI  ++   +      EDLS + R +F++S++    P     +A+TW+ CAR  + EYAER+GGG+FSSKYG+WE  L A+
Subjt:  QLAVHPLKLLVPKGYPHISPI-FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGATGCAATTTTCCACCATTATCGATCTCAATCACTTTGGATATGGAATCGTTTCTTCTCGCCTTGCCCTAAAGGTGAAAGGATCTTTGAGATCTGTTTGGGC
GATTTTCGGAAAATTAGCTTACAGGAAGAGGAAGACGATGTTGCCTGGTCTACCTGGAAATGGAAGAGCTGATTACGAGGCGGCCTGGGATGATTTTTTCTGCCCACAAA
GAGGAAATATGTCTCATCAAATGGTGAATGATGCAGTCCATCAAGAAAAAGCGTTCATCATCTCCACCCCCGGCATGTCACCTTCGACCCTCTTGGAGGAGGTAACAGAA
TCTGATCGTGAGAATGCCATATGTTGTGTTAGTCCTCTTCAACGTTTGATTAAAGTGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTGTTAGTGACATAAGTTC
TCTTGTGTGTATGACTGATAGAGTTTCTTCATCAGCGCCCCTCAACAAGTCCAAAGCTGCAATTGGTGGGGATTTGGTGGGTGCAGTTGAATCTCGTCTGAGAAGAAACT
GTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGAAACTACAGGAGTGCCAGGATGTATGCCAGCTCCAGACGTTTGATGGATTGTGAAGGTTTTGACTTGAAT
TCAATATTTACACAAACATCAAGAGTCGAGACTCCCGAACATTTGCATTGGCATGGGTTCTCATTGCCAGTCAAGCAATCTTTATTAGAAGAAATTAGGAGGATAAATGA
GCAGCTGATTGATACAGTGGTGTCTATTTGTGACAAAGATATGAGAACAACTGATACTACAGCTACAATTGACAGAAGTGAAGGGATCACAGTCGAGTGTTCCTTTGTTG
CTATGCACACCAATTCAAATTTAATCTCACAGCAAACTCCAGTCCTTCAGTTGGCAGTGCATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCACACATTTCTCCAATA
TTCAAGAAATTCCATGTGGAAGATTGTCCAACAGATTGTGAAGACCTTTCATTGAAGGCAAGGGAAAAGTTCAACATGTCTGTTAGAAGCCTTCCACATCCATTCACGAT
AAGCGAAGTGGCCAGGACATGGGACGTGTGCGCTCGAGAAGTCGTTTCGGAGTATGCTGAACGCAATGGCGGTGGCAGTTTCAGTTCAAAATATGGCTCTTGGGAGGACT
GTCTTCATGCTGCTTGGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGATGCAATTTTCCACCATTATCGATCTCAATCACTTTGGATATGGAATCGTTTCTTCTCGCCTTGCCCTAAAGGTGAAAGGATCTTTGAGATCTGTTTGGGC
GATTTTCGGAAAATTAGCTTACAGGAAGAGGAAGACGATGTTGCCTGGTCTACCTGGAAATGGAAGAGCTGATTACGAGGCGGCCTGGGATGATTTTTTCTGCCCACAAA
GAGGAAATATGTCTCATCAAATGGTGAATGATGCAGTCCATCAAGAAAAAGCGTTCATCATCTCCACCCCCGGCATGTCACCTTCGACCCTCTTGGAGGAGGTAACAGAA
TCTGATCGTGAGAATGCCATATGTTGTGTTAGTCCTCTTCAACGTTTGATTAAAGTGGTAAACGTAATGTCACCTAAAGCATTAAGTGCTTCTGTTAGTGACATAAGTTC
TCTTGTGTGTATGACTGATAGAGTTTCTTCATCAGCGCCCCTCAACAAGTCCAAAGCTGCAATTGGTGGGGATTTGGTGGGTGCAGTTGAATCTCGTCTGAGAAGAAACT
GTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGAAACTACAGGAGTGCCAGGATGTATGCCAGCTCCAGACGTTTGATGGATTGTGAAGGTTTTGACTTGAAT
TCAATATTTACACAAACATCAAGAGTCGAGACTCCCGAACATTTGCATTGGCATGGGTTCTCATTGCCAGTCAAGCAATCTTTATTAGAAGAAATTAGGAGGATAAATGA
GCAGCTGATTGATACAGTGGTGTCTATTTGTGACAAAGATATGAGAACAACTGATACTACAGCTACAATTGACAGAAGTGAAGGGATCACAGTCGAGTGTTCCTTTGTTG
CTATGCACACCAATTCAAATTTAATCTCACAGCAAACTCCAGTCCTTCAGTTGGCAGTGCATCCCTTAAAGTTGCTAGTTCCCAAAGGCTATCCACACATTTCTCCAATA
TTCAAGAAATTCCATGTGGAAGATTGTCCAACAGATTGTGAAGACCTTTCATTGAAGGCAAGGGAAAAGTTCAACATGTCTGTTAGAAGCCTTCCACATCCATTCACGAT
AAGCGAAGTGGCCAGGACATGGGACGTGTGCGCTCGAGAAGTCGTTTCGGAGTATGCTGAACGCAATGGCGGTGGCAGTTTCAGTTCAAAATATGGCTCTTGGGAGGACT
GTCTTCATGCTGCTTGGTCATAA
Protein sequenceShow/hide protein sequence
MNMMQFSTIIDLNHFGYGIVSSRLALKVKGSLRSVWAIFGKLAYRKRKTMLPGLPGNGRADYEAAWDDFFCPQRGNMSHQMVNDAVHQEKAFIISTPGMSPSTLLEEVTE
SDRENAICCVSPLQRLIKVVNVMSPKALSASVSDISSLVCMTDRVSSSAPLNKSKAAIGGDLVGAVESRLRRNCSRFGGTIGSRRTRNYRSARMYASSRRLMDCEGFDLN
SIFTQTSRVETPEHLHWHGFSLPVKQSLLEEIRRINEQLIDTVVSICDKDMRTTDTTATIDRSEGITVECSFVAMHTNSNLISQQTPVLQLAVHPLKLLVPKGYPHISPI
FKKFHVEDCPTDCEDLSLKAREKFNMSVRSLPHPFTISEVARTWDVCAREVVSEYAERNGGGSFSSKYGSWEDCLHAAWS