CuGenDBv2

Gene ID	Lag0040622
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Genome location	chr13:6646680..6647225
RNA-Seq Expression	Lag0040622
Synteny	Lag0040622
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0016310 - phosphorylation (biological process) GO:0030148 - sphingolipid biosynthetic process (biological process) GO:0003951 - NAD+ kinase activity (molecular function) GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domains	IPR004207 - Ferredoxin thioredoxin reductase, alpha chain IPR008990 - Electron transport accessory-like domain superfamily IPR044166 - Ferredoxin-thioredoxin reductase, variable chain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034101.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]

2.2e-72

84.53

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS AAR AC M VFS++DV+SS+SS   SLSSVV+NP NCSIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

XP_004147092.1 ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus]

5.2e-74

87.29

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIPSPAP+SAS AAR AC M VFS+ADVKSS+SS   SLSS+V+NP NCSIRRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEG+EGV+KDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

XP_008445916.1 PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]

2.2e-72

84.53

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS AAR AC M VFS++DV+SS+SS   SLSSVV+NP NCSIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.0e-69

83.98

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP     AAR AC M VFSS D KSSYS   SSLSSVV+NP NCSIRRGRR FSEV V+SDSGT SSA AVSAATTSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

XP_038893043.1 ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]

2.8e-75

88.95

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIP+PAP+SASAAARSAC M VFS ADVKSSYSS   SLSSVV+NP NCSIRRGRR+FSEV VRSDSGTS SATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE++
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV36 FeThRed_A domain-containing protein

2.5e-74

87.29

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIPSPAP+SAS AAR AC M VFS+ADVKSS+SS   SLSS+V+NP NCSIRRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEG+EGV+KDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain

1.1e-72

84.53

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS AAR AC M VFS++DV+SS+SS   SLSSVV+NP NCSIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

A0A5D3D039 Sphingoid long-chain bases kinase 1

1.1e-72

84.53

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS AAR AC M VFS++DV+SS+SS   SLSSVV+NP NCSIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPP+KFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

2.4e-69

83.43

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP     AAR AC M VFSS D KSSYS   SSLSSVV+NP NCSI RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPLKVYHVAKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

1.2e-68

82.87

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Query:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP     AAR AC M VFSS D KSSYSS  SSLSSVV+NP NCSI RGRR FSEV V+SDSGT SSA AVSAA TSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        AAARIGARVRVKVPL VYHVAKLPEADLEG+EGVLKDYVRVWKGKRVSANLP+KVEFVVPVEGRPPVKFVAHLKEEEFE+V
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

SwissProt top hits

e value

%identity

Alignment

P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic

3.6e-17

38.37

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Query:  IPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVR
        + S A A+++A A +A    +       +S +++ S+L    I       R    +  EVA++SDS T       S++++   E+E  +    ++G +V+
Subjt:  IPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVR

Query:  VKVPLKVYHVAKLPEADL-EGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        VK PLKVYHV KLPE +L   + GV+K YV  WKGK +S N PFKVE+ + V  R  VK V HLKEEEFE +
Subjt:  VKVPLKVYHVAKLPEADL-EGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

P80680 Ferredoxin-thioredoxin reductase, variable chain

7.9e-25

62.11

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Query:  ATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRP-PVKFVAHLKEEEFEFV
        A+  ++ EE   AAA +IG RVRV  PL+VYHV K P+ D++G+EGV+K YV VWKGKRV+AN PFKVEF + VEG+P PV+F AHL+E+EFEFV
Subjt:  ATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRP-PVKFVAHLKEEEFEFV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

3.5e-28

48.7

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Query:  SSYSSLPSSLSSVVINPLNCSIRRGR--------RMFSEVAVRSDSGTSSSATAVSAATTSLS---EEETGEAAAARIGARVRVKVPLKVYHVAKLPEAD
        S   S+ SS SS+ + P++ S   GR        R   +  +R D    S+A+  + A  S S   E E  E A  +IGARVRV VPLKVYHV ++PE +
Subjt:  SSYSSLPSSLSSVVINPLNCSIRRGR--------RMFSEVAVRSDSGTSSSATAVSAATTSLS---EEETGEAAAARIGARVRVKVPLKVYHVAKLPEAD

Query:  LEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        L G+EG +KDYV +WKGK++SANLPFKV+FV  +EGR PVKF  HLKE+EFE +
Subjt:  LEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

2.1e-28

46.33

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Query:  APASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGR------RMFSEVAVRSD----SGTSSSATAVSAATTSLSEEETGEAAAAR
        +PA A+A  R +    + +SA   ++ ++ P +L S ++ PL+    + +      R  S   +R D    S  S +A A  +++ S SEEE    A A+
Subjt:  APASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGR------RMFSEVAVRSD----SGTSSSATAVSAATTSLSEEETGEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV
        IG+RVRV  PLKVYHV ++PE DLEG+EG LKDYV VWKGKR+SANLP+K+EF   +EGR  VKFV+HLKE+EFEF+
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

Sequences

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CDS sequence

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ATGATCAGTATTGCAAGCAGTATCGGCGTTATACCATCGCCGGCGCCGGCGTCGGCATCGGCGGCCGCTCGTTCCGCCTGTTGTATGATGGTATTCTCTAGTGCTGATGT
AAAATCGTCCTATTCCTCGTTGCCTAGTTCTCTATCGTCGGTTGTTATTAATCCTTTGAACTGCTCGATTAGAAGAGGGAGGAGAATGTTTAGCGAGGTTGCAGTCAGAT
CAGATTCCGGTACTTCGTCTTCAGCCACTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGG
GTTAAGGTGCCTTTGAAGGTGTATCATGTAGCCAAGTTGCCGGAGGCGGATCTTGAGGGGTTGGAAGGAGTTTTGAAGGACTATGTGCGCGTTTGGAAGGGGAAGCGTGT
TTCTGCTAATCTTCCGTTTAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCGCCGGTCAAATTCGTCGCTCATCTCAAGGAGGAAGAGTTTGAATTCGTTTAA

mRNA sequence

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Protein sequence

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MISIASSIGVIPSPAPASASAAARSACCMMVFSSADVKSSYSSLPSSLSSVVINPLNCSIRRGRRMFSEVAVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVR
VKVPLKVYHVAKLPEADLEGLEGVLKDYVRVWKGKRVSANLPFKVEFVVPVEGRPPVKFVAHLKEEEFEFV

Lag0040622 (gene) of Sponge gourd (AG-4) v1 genome