; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040658 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040658
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:7012196..7023439
RNA-Seq ExpressionLag0040658
SyntenyLag0040658
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]6.5e-3928.53Show/hide
Query:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVS-VSTPDRWIWHLDKFGSY
        +WG  LL  G+R++IGNG S R   DPW+ RP +F  +  +  + ++KV + I   G W+   +    L  D+Q I  IP+S     D W WH +  G+Y
Subjt:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVS-VSTPDRWIWHLDKFGSY

Query:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-------
        TVKSGYKL  N   + S+S   +  +WWK  W   IP K+  F WR +H  +P T  L    I    NC +C  A +  +HA+F C  A  VW       
Subjt:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-------

Query:  -----SNLGYKDM---------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVS--QMYSGGEDFILHVD
               + +KD+                           N ++H++          W+  Y  E +  + S +R I   + ++  Q+        L VD
Subjt:  -----SNLGYKDM---------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVS--QMYSGGEDFILHVD

Query:  AAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVAD
        AA +K+    G+GA + +   K  A   + +    S L AEA+A++ GL+   +   +   V +DS SL+  L  + +   +   ++AD
Subjt:  AAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVAD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.8e-5231.73Show/hide
Query:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFG
        GF+WG +LL  G+R ++GNG++++   DPW+PRP+TFK L +     D  V   I   G WD+  + H   +ED   I  +P+ S +  D W+WH DK G
Subjt:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFG

Query:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRA---------
        +Y+V+SGYKL M+ K  A+++        W  +WKL +P K+K F+WRS H  IP   NL    I     C IC +  E   HA F C RA         
Subjt:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRA---------

Query:  -------------LSVWSNLG------------------YKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN--DRIIQTREMVSQMYSGGEDFIL
                     L +WS+L                   + D N ++H + V PV  +CEW+  +L  +     SN   R       V Q +       L
Subjt:  -------------LSVWSNLG------------------YKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN--DRIIQTREMVSQMYSGGEDFIL

Query:  HVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQ
         ++        S+  G ++R  +  LVA     +P   S L AE   ILEGLK  ++   + + V SDSL  I ++R++   + D    V +IQ
Subjt:  HVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQ

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.0e-4329.19Show/hide
Query:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFGSY
        +WG +++K G+R +IGNG  + +  D W+PRP TF+ +          V D I    QWD  KL    LD D  EI +IP+ +    D  +WH DK G+Y
Subjt:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFGSY

Query:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-------
        +VKSGY+L +  K   S S    S ++W  LW L +P K+K F+WR+ +N +P   NL K  +  +  C  C  + E  SHAL  C  A  +W       
Subjt:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-------

Query:  --------------SNLG-------------------YKDMNCVVHKRPVPPV--GVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFILHV
                       N+                    Y    C+   R + P+    + E +L      +   +S+  I    +    +      F ++V
Subjt:  --------------SNLG-------------------YKDMNCVVHKRPVPPV--GVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFILHV

Query:  DAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQGQ
        DAA+    +S+GVGAV+R   GK+VA       L  S+  AEA A+L GL++  +  +S + + SD L ++ ++ +    +++ F  +  IQ Q
Subjt:  DAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQGQ

XP_030486845.1 uncharacterized protein LOC115703751 [Cannabis sativa]2.5e-3831Show/hide
Query:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFG
        G  WG +LL  G+R ++G+G S+    DPW+P  + F+ L     D  +KV   I     W++  L+   +  DV+ I  IP++++   D  IWH +  G
Subjt:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFG

Query:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLGY
         YTVKSGY +  N + +  +     S +WWK+ W+L++P KV+ F+WR+ ++C+P T  L   HI     C +C    E   HALF C R   +W +  +
Subjt:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLGY

Query:  KDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN---DRIIQTREMVS----QMYSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIP
           N ++ K                  EYQ   +S         +R M +     +        L+ DAA  K    +G GAVLR   G +VA F + IP
Subjt:  KDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN---DRIIQTREMVS----QMYSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIP

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]2.5e-3829.63Show/hide
Query:  KLRAGFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHL
        K+  G  WG +LL  G+R +IG+G+SV    DPWIPR S F    Y   DP   V   I    +W++P L       D+  I  IP+S S   D+WIWH 
Subjt:  KLRAGFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHL

Query:  DKFGSYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWS
             YTV++GY L          + +     WWK  W L +P KVK FVW++FH  IP   +L    I     C +CS A E   HAL LC  A  VW 
Subjt:  DKFGSYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWS

Query:  NLGYK---------------------------------------DMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFI
        + GY                                        D N  +H +PV            Y   +Q  H S    IQ   M+S   +    +I
Subjt:  NLGYK---------------------------------------DMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFI

Query:  --------LHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVA
                ++VDAA        GVG ++R+ +G++VA + +       S   EA A+L GL   +   +   T+ SDSL L++ +  +    +    +V 
Subjt:  --------LHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVA

Query:  DIQGQ
        DI+ +
Subjt:  DIQGQ

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248744.3e-5231.73Show/hide
Query:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFG
        GF+WG +LL  G+R ++GNG++++   DPW+PRP+TFK L +     D  V   I   G WD+  + H   +ED   I  +P+ S +  D W+WH DK G
Subjt:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPV-SVSTPDRWIWHLDKFG

Query:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRA---------
        +Y+V+SGYKL M+ K  A+++        W  +WKL +P K+K F+WRS H  IP   NL    I     C IC +  E   HA F C RA         
Subjt:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRA---------

Query:  -------------LSVWSNLG------------------YKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN--DRIIQTREMVSQMYSGGEDFIL
                     L +WS+L                   + D N ++H + V PV  +CEW+  +L  +     SN   R       V Q +       L
Subjt:  -------------LSVWSNLG------------------YKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSN--DRIIQTREMVSQMYSGGEDFIL

Query:  HVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQ
         ++        S+  G ++R  +  LVA     +P   S L AE   ILEGLK  ++   + + V SDSL  I ++R++   + D    V +IQ
Subjt:  HVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVADIQ

A0A803PJK4 Uncharacterized protein8.9e-4230.85Show/hide
Query:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSV-STPDRWIWHLDKFG
        G +WG ELL+ G+R ++GNG  ++   DPW+P  ++FK L +K  D +L V + I    QW +P L    LD D+ +I  IP+S  S  D+ IWH +  G
Subjt:  GFIWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSV-STPDRWIWHLDKFG

Query:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-----
         YTVKSGY L      + + S +  S++ WK  WKLNIP KV+ F+W++   C+P    L+K HI     C +C   +E   HALFLC RA  VW     
Subjt:  SYTVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVW-----

Query:  -------SNLGYKDM---------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQL------------VHRSNDRIIQTREMVSQM
                +  +KD+                           N   H     P  +     L YL EYQ             VHR+N+  +  +     +
Subjt:  -------SNLGYKDM---------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQL------------VHRSNDRIIQTREMVSQM

Query:  YSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVA
                L+ DAA       SG GA+LR   G++VA   +  P        EA+A+   L+ L S+ +    + +DSL ++  L+ +    +D   V+ 
Subjt:  YSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQCQADCFPVVA

Query:  DI
        DI
Subjt:  DI

A0A803QQT2 Uncharacterized protein2.0e-4129.52Show/hide
Query:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVS-VSTPDRWIWHLDKFGSY
        +WG +L+  G R ++GNG SVRV+ DPW+PRP TFKV        +L V D  L  GQWD   +  +    DV  I  IP S     D+ +WH  K+G Y
Subjt:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVS-VSTPDRWIWHLDKFGSY

Query:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLIC-SEAHEDTSHALFLCSRALSVWSNLG-Y
        +VKSGY++  +   E   S+     +WWK+LW+L IPPKVK FVW+  HN +P  +NL K  I + + C  C S   E  +HAL+ C  +   W   G Y
Subjt:  TVKSGYKLGMNQKIEASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLIC-SEAHEDTSHALFLCSRALSVWSNLG-Y

Query:  KDM--------------------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFILHVDA
         D+                                      N VVH    P      EW  ++L++++      +R  ++ E    +    +   ++VDA
Subjt:  KDM--------------------------------------NCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQMYSGGEDFILHVDA

Query:  AWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKD
           +  + SG+G V+R   G +++     +      L  E +AI +G+++    ++ + +V +D L  + ++++K+
Subjt:  AWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKD

M5VP36 Uncharacterized protein (Fragment)6.8e-4229.97Show/hide
Query:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFGSY
        IWG ELL SG+RK+IG+G    V  D WIPRP++F+++  ++ D + KV D I P+G W++  L+    + DV+ I  IP+SV+   DRW+WH    G Y
Subjt:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFGSY

Query:  TVKSGYKLGMNQKIE-----ASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSN
        +VKSGY+L +++K +      S+S+  + + +W+++W   +P K+  F WR+  N +PC  NL K  I ++ +C IC+   E   HAL+ C  A  VW  
Subjt:  TVKSGYKLGMNQKIE-----ASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSN

Query:  LGYKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQM------YSGGE-------------------------DFILHVDAAWTK
        + ++    V         G   E    YLS   L    N  +I+ R     +      +  GE                          + L+VD A+  
Subjt:  LGYKDMNCVVHKRPVPPVGVRCEWILDYLSEYQLVHRSNDRIIQTREMVSQM------YSGGE-------------------------DFILHVDAAWTK

Query:  HPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLIS-ILRDKDQCQADCFPVVADIQ
             G+GAV+R+  G+++A     +   +SS  AE +A L  +K       S + + SDS   ++ + +D+++  A    ++ DI+
Subjt:  HPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLIS-ILRDKDQCQADCFPVVADIQ

M5XJH9 Uncharacterized protein (Fragment)1.2e-4133.33Show/hide
Query:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFGSY
        IWG ELL SG+RK+IG+G    V  D WIPRP++F+ +  ++ D + KV D I P G W++  L+    +EDV+ IT IP+SV+   DRW+WH    G Y
Subjt:  IWGLELLKSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVS-TPDRWIWHLDKFGSY

Query:  TVKSGYKLGMNQKIE-----ASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSN
        +VKSGY+L M++K E      S+S   + + +W+++W   +  K+  F WR+  N +PC  N+ K  I  D +C IC+   E   HAL+ C  A  VW  
Subjt:  TVKSGYKLGMNQKIE-----ASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSN

Query:  LGYKD----MNCVVHKRPVPPVGVRCEWILDYLSEY-QLVHRSNDRIIQTREMVSQMYSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGI
        + +++    +N   H        +        + EY  LV      I++     S    G   + L+VDA +        +G V+R+  G +VA+    +
Subjt:  LGYKD----MNCVVHKRPVPPVGVRCEWILDYLSEY-QLVHRSNDRIIQTREMVSQMYSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGI

Query:  PLTS--SSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLIS
        PL S  SS  AE +  L G+K       S + + SDS  +++
Subjt:  PLTS--SSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.4e-0727.43Show/hide
Query:  VKSGYKLGMNQKI--EASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLGYK
        ++SGY +  ++ +  E +      S+   + +WKL++ PK+K F+WR     +     LR  +I AD  C  C    E   H +F C    SVW     +
Subjt:  VKSGYKLGMNQKI--EASASDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLGYK

Query:  DMNCVVHKRPVPP
          N ++  +  PP
Subjt:  DMNCVVHKRPVPP

AT3G09510.1 Ribonuclease H-like superfamily protein8.9e-1831.22Show/hide
Query:  AGFIWGLELLKSGIRKQIGNGNSVRV----MVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQ---WDIPKLHHLLLDEDVQEITRIPVSVS-TPDRW
        A  + G+ LLK G R  IG+G ++R+    +VD   PRP   +   YK    ++ + +     G    WD  K+   +   D   I RI ++ S  PD+ 
Subjt:  AGFIWGLELLKSGIRKQIGNGNSVRV----MVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQ---WDIPKLHHLLLDEDVQEITRIPVSVS-TPDRW

Query:  IWHLDKFGSYTVKSGYKLGMNQKIEASASDNVL--SSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSR
        IW+ +  G YTV+SGY L  +       + N    S     R+W L I PK+K F+WR+    +  T  L    +  D +C  C   +E  +HALF C  
Subjt:  IWHLDKFGSYTVKSGYKLGMNQKIEASASDNVL--SSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSR

Query:  ALSVW
        A   W
Subjt:  ALSVW

AT3G25270.1 Ribonuclease H-like superfamily protein4.6e-0632.35Show/hide
Query:  RLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLG
        ++WKL   PK+K F+W+     +    NL++ HI     C  C +  E + H  F C  A  VW   G
Subjt:  RLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAATTCGAGATTCCAGGAGACAGAGGAAGTGGAAAGAAGCAGATCACAACATGAAACTCCAAACAGAACGAATCCGATTACCAAGATAACAAGAACCCACGA
GCCAATTCTCAGAAAACAAGTGAAGAACAAGCAAGAGAATCACCTCACTGCTCAACTAAAAAGGAAGAACTCGAGGGATGAGAAAGAGGAGGACAGCTATGGCGATCGGT
GGCTCAAAGAGAAGAGGCCCGTTGGCCCACAGTTGGTGGAACGGCCATTGTTTGGTATGAAAATGGCGGAGAAGCTTCGTGCAGGTTTTATTTGGGGGTTGGAATTGTTG
AAGTCTGGCATTAGGAAACAAATTGGTAATGGAAATTCTGTTCGAGTGATGGTGGATCCCTGGATTCCTCGTCCTTCAACTTTTAAGGTGCTTGGTTACAAGATATTTGA
TCCAGACTTGAAAGTAGAGGATTGTATCCTGCCGTCTGGTCAATGGGACATCCCGAAACTCCACCACCTCCTTTTGGATGAGGATGTTCAAGAGATTACAAGAATCCCAG
TTAGCGTGTCAACTCCAGACAGATGGATTTGGCATCTTGATAAATTTGGTTCCTATACGGTTAAGAGTGGGTACAAATTGGGGATGAATCAGAAAATTGAGGCGTCGGCA
TCGGACAATGTTCTCAGTTCCAGGTGGTGGAAGAGACTTTGGAAATTAAACATTCCACCAAAAGTGAAAACTTTTGTTTGGAGATCTTTCCATAATTGTATTCCCTGTAC
AATCAATCTTCGTAAGCACCACATTCCAGCTGATATTAATTGTCTGATCTGTTCGGAGGCGCATGAGGATACATCTCATGCCTTATTTTTGTGTTCTAGAGCGTTATCCG
TTTGGTCGAATTTGGGGTATAAGGATATGAATTGTGTGGTTCATAAGCGGCCAGTTCCTCCGGTGGGTGTCCGGTGTGAATGGATTCTGGATTATCTTTCAGAATACCAA
TTAGTTCACCGGTCCAATGATCGAATAATTCAAACCAGGGAAATGGTTTCTCAAATGTACTCAGGAGGGGAAGACTTTATTTTACATGTTGATGCAGCGTGGACTAAACA
CCCCATGTCCAGTGGTGTGGGGGCAGTGTTGCGCTCAAAGACGGGTAAATTGGTGGCTATTTTTCAAAGAGGAATCCCTTTAACCTCATCGTCATTATGTGCTGAGGCGA
TAGCGATTCTTGAAGGTCTCAAAATGCTTTCCTCTCTGAAGATTAGTAAGGTCACGGTATGTTCGGATTCCCTATCGTTAATTTCTATTCTTCGTGATAAAGATCAGTGT
CAGGCAGATTGCTTTCCTGTGGTGGCAGATATTCAAGGACAACCCAACAATTTGGTTAATCCTGTATGGAGCGGTACTACCTATACCAACAAGGTGCACCTTCCTTTTCG
GTGGCTCAATCATAGGAACTTTGAAGTTAAGCGTGGAAGCAGTTTAAGACAAGTACGACCCAAGCCCAATAAAGCCCAAGCCCAAGTTGTTAGGCCCAAAAGTCACCAGG
GCCCATCCAGCGAGAACTCTATAAATAGAGGGGTTCTCCTCCATTTCAGGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTTCAAAGCTCTCAAGC
AGAACCAGAGAATTCAGAGAGACTCCACCAAGTTTGAAGACCGAAGACTCTCTGCAATCCACAAGTCCAAGTGTTGAACATTTCTTGAAGACCAAACACTCTTCAAGACT
TCAACACTCCTTGAAGACCAAACATCCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAGCACTTCTTGAAGATTGAAGACTCCTTCAAGACTG
GAAGACTTCAAGCTCCAAGAATCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAAATTCGAGATTCCAGGAGACAGAGGAAGTGGAAAGAAGCAGATCACAACATGAAACTCCAAACAGAACGAATCCGATTACCAAGATAACAAGAACCCACGA
GCCAATTCTCAGAAAACAAGTGAAGAACAAGCAAGAGAATCACCTCACTGCTCAACTAAAAAGGAAGAACTCGAGGGATGAGAAAGAGGAGGACAGCTATGGCGATCGGT
GGCTCAAAGAGAAGAGGCCCGTTGGCCCACAGTTGGTGGAACGGCCATTGTTTGGTATGAAAATGGCGGAGAAGCTTCGTGCAGGTTTTATTTGGGGGTTGGAATTGTTG
AAGTCTGGCATTAGGAAACAAATTGGTAATGGAAATTCTGTTCGAGTGATGGTGGATCCCTGGATTCCTCGTCCTTCAACTTTTAAGGTGCTTGGTTACAAGATATTTGA
TCCAGACTTGAAAGTAGAGGATTGTATCCTGCCGTCTGGTCAATGGGACATCCCGAAACTCCACCACCTCCTTTTGGATGAGGATGTTCAAGAGATTACAAGAATCCCAG
TTAGCGTGTCAACTCCAGACAGATGGATTTGGCATCTTGATAAATTTGGTTCCTATACGGTTAAGAGTGGGTACAAATTGGGGATGAATCAGAAAATTGAGGCGTCGGCA
TCGGACAATGTTCTCAGTTCCAGGTGGTGGAAGAGACTTTGGAAATTAAACATTCCACCAAAAGTGAAAACTTTTGTTTGGAGATCTTTCCATAATTGTATTCCCTGTAC
AATCAATCTTCGTAAGCACCACATTCCAGCTGATATTAATTGTCTGATCTGTTCGGAGGCGCATGAGGATACATCTCATGCCTTATTTTTGTGTTCTAGAGCGTTATCCG
TTTGGTCGAATTTGGGGTATAAGGATATGAATTGTGTGGTTCATAAGCGGCCAGTTCCTCCGGTGGGTGTCCGGTGTGAATGGATTCTGGATTATCTTTCAGAATACCAA
TTAGTTCACCGGTCCAATGATCGAATAATTCAAACCAGGGAAATGGTTTCTCAAATGTACTCAGGAGGGGAAGACTTTATTTTACATGTTGATGCAGCGTGGACTAAACA
CCCCATGTCCAGTGGTGTGGGGGCAGTGTTGCGCTCAAAGACGGGTAAATTGGTGGCTATTTTTCAAAGAGGAATCCCTTTAACCTCATCGTCATTATGTGCTGAGGCGA
TAGCGATTCTTGAAGGTCTCAAAATGCTTTCCTCTCTGAAGATTAGTAAGGTCACGGTATGTTCGGATTCCCTATCGTTAATTTCTATTCTTCGTGATAAAGATCAGTGT
CAGGCAGATTGCTTTCCTGTGGTGGCAGATATTCAAGGACAACCCAACAATTTGGTTAATCCTGTATGGAGCGGTACTACCTATACCAACAAGGTGCACCTTCCTTTTCG
GTGGCTCAATCATAGGAACTTTGAAGTTAAGCGTGGAAGCAGTTTAAGACAAGTACGACCCAAGCCCAATAAAGCCCAAGCCCAAGTTGTTAGGCCCAAAAGTCACCAGG
GCCCATCCAGCGAGAACTCTATAAATAGAGGGGTTCTCCTCCATTTCAGGGGTTCAGAAATTCTACACTCTCACAAAGACAAGAGTTCAGAGTTTTCAAAGCTCTCAAGC
AGAACCAGAGAATTCAGAGAGACTCCACCAAGTTTGAAGACCGAAGACTCTCTGCAATCCACAAGTCCAAGTGTTGAACATTTCTTGAAGACCAAACACTCTTCAAGACT
TCAACACTCCTTGAAGACCAAACATCCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAGCACTTCTTGAAGATTGAAGACTCCTTCAAGACTG
GAAGACTTCAAGCTCCAAGAATCCATTGA
Protein sequenceShow/hide protein sequence
MEANSRFQETEEVERSRSQHETPNRTNPITKITRTHEPILRKQVKNKQENHLTAQLKRKNSRDEKEEDSYGDRWLKEKRPVGPQLVERPLFGMKMAEKLRAGFIWGLELL
KSGIRKQIGNGNSVRVMVDPWIPRPSTFKVLGYKIFDPDLKVEDCILPSGQWDIPKLHHLLLDEDVQEITRIPVSVSTPDRWIWHLDKFGSYTVKSGYKLGMNQKIEASA
SDNVLSSRWWKRLWKLNIPPKVKTFVWRSFHNCIPCTINLRKHHIPADINCLICSEAHEDTSHALFLCSRALSVWSNLGYKDMNCVVHKRPVPPVGVRCEWILDYLSEYQ
LVHRSNDRIIQTREMVSQMYSGGEDFILHVDAAWTKHPMSSGVGAVLRSKTGKLVAIFQRGIPLTSSSLCAEAIAILEGLKMLSSLKISKVTVCSDSLSLISILRDKDQC
QADCFPVVADIQGQPNNLVNPVWSGTTYTNKVHLPFRWLNHRNFEVKRGSSLRQVRPKPNKAQAQVVRPKSHQGPSSENSINRGVLLHFRGSEILHSHKDKSSEFSKLSS
RTREFRETPPSLKTEDSLQSTSPSVEHFLKTKHSSRLQHSLKTKHPSRLQHSLKIKDSSGHQHFLKIEDSFKTGRLQAPRIH