CuGenDBv2

Gene ID	Lag0040660
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein RDM16 isoform X1
Genome location	chr13:7030955..7033826
RNA-Seq Expression	Lag0040660
Synteny	Lag0040660
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
InterPro domains	IPR010541 - Domain of unknown function DUF1115 IPR013881 - Pre-mRNA-splicing factor 3 IPR027104 - U4/U6 small nuclear ribonucleoprotein Prp3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7030755.1 Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-299

90.16

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS +K EEKAK AG +LG S  TNV T  S+  +SSS 
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLK
        TLPAANALGGGINVPA LTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGREIDEQGNVVN+TKPS+LSTLK
Subjt:  TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLK

Query:  VNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS
        VNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLLRPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Subjt:  VNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS

Query:  ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
        ERV VKEKTK+PIPEIEWWDVPLLH GTY+ VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
Subjt:  ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG

Query:  LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARE
        LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLF+DTNSLETIVSVYKINDLSHPQARFKVDVNARE
Subjt:  LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARE

Query:  NRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD
        NRL+GCAVICD ISVLVVEGGSKSIKRYGKLML+RINWAASVKE+EE+DENDDKPVNKCSLVWQGSVAKSSF+KF IQECMTEAAARKIFADAGVGHYWD
Subjt:  NRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD

Query:  LAVNFSDDQI
        LAVNFSDD I
Subjt:  LAVNFSDDQI

XP_022139030.1 protein RDM16 isoform X1 [Momordica charantia]

1.9e-301

90.34

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS 
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL
        TLPAA N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTL
Subjt:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL

Query:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV
        KVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Subjt:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV

Query:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
        SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
Subjt:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ

Query:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR
        GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNAR
Subjt:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR

Query:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
        ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Subjt:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW

Query:  DLAVNFSDDQI
        DLAVNFSDDQI
Subjt:  DLAVNFSDDQI

XP_022139031.1 protein RDM16 isoform X2 [Momordica charantia]

1.9e-301

90.34

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS 
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL
        TLPAA N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTL
Subjt:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL

Query:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV
        KVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Subjt:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV

Query:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
        SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
Subjt:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ

Query:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR
        GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNAR
Subjt:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR

Query:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
        ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Subjt:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW

Query:  DLAVNFSDDQI
        DLAVNFSDDQI
Subjt:  DLAVNFSDDQI

XP_022139032.1 protein RDM16 isoform X3 [Momordica charantia]

3.0e-302

91.27

Show/hide

Query:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA
        P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPA
Subjt:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA

Query:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
        A N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
Subjt:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI

Query:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV
        NKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Subjt:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV

Query:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
        IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
Subjt:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE

Query:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL
        PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRL
Subjt:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL

Query:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
        TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Subjt:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV

Query:  NFSDDQI
        NFSDDQI
Subjt:  NFSDDQI

XP_022139033.1 protein RDM16 isoform X4 [Momordica charantia]

3.0e-302

91.27

Show/hide

Query:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA
        P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPA
Subjt:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA

Query:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
        A N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
Subjt:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI

Query:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV
        NKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Subjt:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV

Query:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
        IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
Subjt:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE

Query:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL
        PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRL
Subjt:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL

Query:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
        TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Subjt:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV

Query:  NFSDDQI
        NFSDDQI
Subjt:  NFSDDQI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CB57 protein RDM16 isoform X1

9.3e-302

90.34

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS 
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL
        TLPAA N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTL
Subjt:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL

Query:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV
        KVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Subjt:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV

Query:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
        SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
Subjt:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ

Query:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR
        GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNAR
Subjt:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR

Query:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
        ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Subjt:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW

Query:  DLAVNFSDDQI
        DLAVNFSDDQI
Subjt:  DLAVNFSDDQI

A0A6J1CBF9 protein RDM16 isoform X2

9.3e-302

90.34

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS 
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL
        TLPAA N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTL
Subjt:  TLPAA-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTL

Query:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV
        KVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Subjt:  KVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV

Query:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
        SERVIVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ
Subjt:  SERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ

Query:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR
        GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNAR
Subjt:  GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNAR

Query:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
        ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW
Subjt:  ENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYW

Query:  DLAVNFSDDQI
        DLAVNFSDDQI
Subjt:  DLAVNFSDDQI

A0A6J1CCW0 protein RDM16 isoform X3

1.4e-302

91.27

Show/hide

Query:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA
        P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPA
Subjt:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA

Query:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
        A N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
Subjt:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI

Query:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV
        NKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Subjt:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV

Query:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
        IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
Subjt:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE

Query:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL
        PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRL
Subjt:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL

Query:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
        TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Subjt:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV

Query:  NFSDDQI
        NFSDDQI
Subjt:  NFSDDQI

A0A6J1CEQ9 protein RDM16 isoform X4

1.4e-302

91.27

Show/hide

Query:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA
        P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPA
Subjt:  PYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA

Query:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
        A N  GGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI
Subjt:  A-NALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNI

Query:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV
        NKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Subjt:  NKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV

Query:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
        IVKEKTK+PIPEIEWWDV LLH GTYD VGDGFVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE
Subjt:  IVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIE

Query:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL
        PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRL
Subjt:  PPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRL

Query:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
        TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV
Subjt:  TGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAV

Query:  NFSDDQI
        NFSDDQI
Subjt:  NFSDDQI

A0A6J1ILJ1 protein RDM16-like isoform X1

5.7e-299

89.84

Show/hide

Query:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL
        R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   + +A SS +K EEKAK AG +LG +  TNV T LS+  +SS  
Subjt:  RDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL

Query:  TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLK
        TLPAANALGGGINVPA LTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGREIDEQGNVVN+TKPS+LSTLK
Subjt:  TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLK

Query:  VNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS
        VNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLLRPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Subjt:  VNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS

Query:  ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
        ERV VK+KTK+PIPEIEWWDVPLLH GTY+ VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG
Subjt:  ERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG

Query:  LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARE
        LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLF+DTNSLETIVSVYKINDLSHPQARFKVDVNARE
Subjt:  LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARE

Query:  NRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD
        NRL+GCAVICD ISVLVVEGGSKSIKRYGKLML+RINWAASVKE+EE+DENDDKPVNKCSLVWQGSVAKSSF+KF IQECMTEAAARKIFADAGVGHYWD
Subjt:  NRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWD

Query:  LAVNFSDDQI
        LAVNFSDD I
Subjt:  LAVNFSDDQI

SwissProt top hits

e value

%identity

Alignment

O43395 U4/U6 small nuclear ribonucleoprotein Prp3

9.9e-67

33.02

Show/hide

Query:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG
        E+ +SS+ S+   DR    S++ +      G    +S ++    K+ +   +E+ E+ + IP            ++  +   ++  + EE+ K    +  
Subjt:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG

Query:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL
        P+P         + +SS    LP  N +       A        E  ++A EL AR+        G   +     L NL    IA      +  TK   L
Subjt:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL

Query:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA
         LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Subjt:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA

Query:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQ
        QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G +D        ++  R+D   IT  VEHP  + PP +   P   
Subjt:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQ

Query:  PLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD
         + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D
Subjt:  PLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD

Query:  TNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ
          S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC LVW+
Subjt:  TNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ

Query:  GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS
        G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Subjt:  GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS

Q2KIA6 U4/U6 small nuclear ribonucleoprotein Prp3

1.3e-66

32.71

Show/hide

Query:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG
        E+ +SS+ S+   DR    S++ D      G    +S ++    K+ +   +E+ E+ + IP            ++  +   ++  + EE+ K    +  
Subjt:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG

Query:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQ-----------ELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKA
        P+P         + +SS    LP  N +      P+   +  + +A+++A+           +LA + G   +     L NL    IA      +  TK 
Subjt:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQ-----------ELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKA

Query:  PVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKF
          L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++ 
Subjt:  PVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKF

Query:  GEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPP
         + QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G +D        ++  R+D   IT  VEHP  + PP +   P
Subjt:  GEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPP

Query:  PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL
            + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL
Subjt:  PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL

Query:  FDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSL
         +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC L
Subjt:  FDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSL

Query:  VWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS
        VW+G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Subjt:  VWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS

Q5R5F1 U4/U6 small nuclear ribonucleoprotein Prp3

9.9e-67

33.02

Show/hide

Query:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG
        E+ +SS+ S+   DR    S++ +      G    +S ++    K+ +   +E+ E+ + IP            ++  +   ++  + EE+ K    +  
Subjt:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG

Query:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL
        P+P         + +SS    LP  N +       A        E  ++A EL AR+        G   +     L NL    IA      +  TK   L
Subjt:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL

Query:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA
         LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Subjt:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA

Query:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQ
        QA      +   A  K     +  L  ++ +   KE  +  IPEIEWWD  ++  G +D        ++  R+D   IT  VEHP  + PP +   P   
Subjt:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKD--KITIYVEHPRPIEPPAEPAPPPPQ

Query:  PLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD
         + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D
Subjt:  PLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDD

Query:  TNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ
          S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W          +DEE DE   K  NKC LVW+
Subjt:  TNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVK-----EDEEDDENDDKPVNKCSLVWQ

Query:  GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS
        G+    SF +   ++C TE  AR+ F   G  HYWDLA++ S
Subjt:  GSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS

Q5ZJ85 U4/U6 small nuclear ribonucleoprotein Prp3

1.1e-68

34.22

Show/hide

Query:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG
        E+ +SS+ S+   DR+    +E+       G    +S ++    K+ +   +E+ ++ + IP            ++  +   ++  + EE+ K    +  
Subjt:  EKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIP-----------LMKKAKTAGSSVLKPEEKAKAAGSVLG

Query:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL
        P+P   +      ++SS S  LP  N +       A        E  ++A EL AR+        G   +     L NL    IA      +  TK   L
Subjt:  PSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL

Query:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA
         LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN ++D R+ I  T   R KR +F+F E+GK+ K A+  +LR+K   A
Subjt:  RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA

Query:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPL
        Q K+ + + +Q A+ K     +  L  ++ +   KE  +  IPEIEWWD  ++  G     G     D+      IT  VEHP  + PP +   P    +
Subjt:  QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPL

Query:  KLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTN
         LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  
Subjt:  KLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTN

Query:  SLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASV-----KEDEEDDENDDKPVNKCSLVWQGS
        S    ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W         ++D+E DE   K  NKCSLVW+G+
Subjt:  SLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASV-----KEDEEDDENDDKPVNKCSLVWQGS

Query:  VAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS
            SF +   ++C TE  AR+ F   G  HYWDLA++ S
Subjt:  VAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFS

Q9C7E7 Protein RDM16

1.6e-205

63.68

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Query:  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPP
        SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK LA++LK +PL+KKA            K  + GS     PP
Subjt:  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPP

Query:  TNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQ
        +    A+S+  S +S TLP            AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALGREIDE 
Subjt:  TNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQ

Query:  GNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA
        GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Subjt:  GNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA

Query:  KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQ
        KA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L  G Y  + DG + +  ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQ
Subjt:  KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQ

Query:  RRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIND
        RRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++ETIVSVYKI  
Subjt:  RRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIND

Query:  LSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE
        LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  ED+E +    NKC LVWQGS+ K SF++F + EC+TE
Subjt:  LSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE

Query:  AAARKIFADAGVGHYWDLAVNFSDD
        + A+K+F DAGV HYWDLAVN+SDD
Subjt:  AAARKIFADAGVGHYWDLAVNFSDD

Arabidopsis top hits

e value

%identity

Alignment

AT1G28060.1 Pre-mRNA-splicing factor 3

1.1e-206

63.68

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Query:  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPP
        SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK LA++LK +PL+KKA            K  + GS     PP
Subjt:  SSKRSREERDRDPYLSQEMDGTSSAAGR--------SGNLSLDA---LAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPP

Query:  TNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQ
        +    A+S+  S +S TLP            AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+DALGREIDE 
Subjt:  TNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQ

Query:  GNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA
        GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Subjt:  GNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA

Query:  KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQ
        KA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L  G Y  + DG + +  ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQ
Subjt:  KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQ

Query:  RRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIND
        RRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++ETIVSVYKI  
Subjt:  RRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKIND

Query:  LSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE
        LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  ED+E +    NKC LVWQGS+ K SF++F + EC+TE
Subjt:  LSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTE

Query:  AAARKIFADAGVGHYWDLAVNFSDD
        + A+K+F DAGV HYWDLAVN+SDD
Subjt:  AAARKIFADAGVGHYWDLAVNFSDD

AT3G55930.1 Pre-mRNA-splicing factor 3

5.7e-94

48.31

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Query:  KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKL
        K TK  VLR+DALGREIDE GNV+++TKP N STL VNI                   D+ PH               +++S                K+
Subjt:  KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKL

Query:  RSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPA
         S++ +A                                  K  T D I E+   D  +L   T        + ++ +       ++EHP PIEPPAE A
Subjt:  RSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPA

Query:  PPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER
         PPPQPLK+TK+E+KKLRT RR+AKE +++EMI QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTPAE+REKKER
Subjt:  PPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER

Query:  KLF-DDTNSLETIVSVYKIN-DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLV
        KLF D T  +ETIVSVYKIN  LS P+ RFKV +NA++N LTG +V+ DG+SV+VVEG  K+I RY KLML+RINW  + K+++E++       NKC LV
Subjt:  KLF-DDTNSLETIVSVYKIN-DLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEDDENDDKPVNKCSLV

Query:  WQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNF
        WQGSV K SF++F +QEC+T++ A+K+F DAGV HYWDLA+N+
Subjt:  WQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNF

AT3G56790.1 RNA splicing factor-related

1.5e-14

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Query:  PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD
        PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Subjt:  PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD

AT3G56790.1 RNA splicing factor-related

6.7e-10

44.76

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Query:  NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ
        ++ +  TS    EAVKR QEL                       A D AV  K TK   LR+D LGREIDE G+V+      NLSTL VN NK KKD FQ
Subjt:  NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ

Query:  -ILKP
         ILKP
Subjt:  -ILKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATAGGATTTCCGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGATCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAGCTGCTGGGAG
AAGTGGCAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCTGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAGGCTAAAA
CAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTGGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCA
TCAAGTTCGTTGACCTTACCGGCTGCCAATGCACTTGGTGGTGGTATTAATGTCCCAGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCT
TGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCGCAGAAGCCAACCAAGGCCC
CTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCCAGCAACCTTAGCACTCTAAAGGTTAACATCAACAAGCAG
AAAAAGGACGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGATTCTAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAA
GAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCTGAGACCATAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGC
AGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATT
GAGTGGTGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGTGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTACAATATATGTGGAGCA
TCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTAGCAAAAG
AGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCT
ACTAAACTGGAGAAAGAGATTCGTGCTGCAGCCGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGCCGTGAGAAGAAAGA
ACGTAAACTCTTTGATGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAACGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGG
AGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTACGGGAAGCTTATGCTTAGGCGTATA
AATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGACGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAA
TAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAA
TATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MDRISEKEKSSKRSREERDRDPYLSQEMDGTSSAAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKAKTAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAAS
SSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQ
KKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEI
EWWDVPLLHFGTYDGVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDP
TKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRI
NWAASVKEDEEDDENDDKPVNKCSLVWQGSVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Lag0040660 (gene) of Sponge gourd (AG-4) v1 genome