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Lag0040693 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040693
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr13:7400555..7401109
RNA-Seq ExpressionLag0040693
SyntenyLag0040693
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004519 - endonuclease activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR011320 - Ribonuclease H1, N-terminal
IPR037056 - Ribonuclease H1, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBQ1972841.1 ribonuclease H family protein [Paraprevotella sp.]7.5e-0753.06Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAY
        MGGKKF+VV+ G  PG+Y +W EC  Q+NGF G++Y S+ T E+ + AY
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAY
RGU65032.1 ribonuclease H [Paraprevotella clara]9.8e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
WP_008618126.1 ribonuclease H family protein [Paraprevotella clara]9.8e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
WP_008626609.1 ribonuclease H family protein [Paraprevotella xylaniphila]9.8e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
WP_021979415.1 ribonuclease H family protein [Paraprevotella clara]9.8e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
TrEMBL top hitse value%identityAlignment
A0A6N3EQ78 Ribonuclease H4.7e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
F3QTG8 Ribonuclease H4.7e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
G5SN94 Ribonuclease H4.7e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
R5NZJ5 Ribonuclease H4.7e-0752.94Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        MG KKF+VV+ G  PG+Y +W +C  Q+NGF G+IY S+DT E+ + AY T
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
V4SVI8 Cauli_VI domain-containing protein8.1e-0744.62Show/hide
Query:  FVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMTYMENVEGRHSTTGMIERFQY
        +VVF G  PG+Y +W EC  QVNGF G+ Y SY ++ DVK AY  Y++  E    T+ M+E  ++
Subjt:  FVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMTYMENVEGRHSTTGMIERFQY
SwissProt top hitse value%identityAlignment
Q07762 Ribonuclease H1.5e-0550Show/hide
Query:  FFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
        F+VV VG   G+Y TW +CS QV GFSG++Y S+ T+ + + AY+T
Subjt:  FFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMT
Q9KEI9 Ribonuclease H1.2e-0438.78Show/hide
Query:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAY
        M   K++VV+ G  PG+Y +W  C +QV G++G+ + SY + E+ +AA+
Subjt:  MGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAY
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTTTACTCTCTGTCTGTTCACGCGTTTTTGATTCCAGCACTCTTCACCATTCTTTTCGTCTTCCTCTTCGTCTCCTCCCTCATCTCTGATCTCGCATGGCATAT
GGGGGGGAAAAAGTTCTTCGTCGTATTCGTTGGGTGTTTGCCAGGTGTGTACCTGACATGGTACGAATGTTCTAGTCAAGTGAACGGATTTAGTGGGTCAATTTACTGCT
CGTACGACACGATCGAGGACGTGAAAGCAGCATATATGACATACATGGAGAACGTCGAGGGTCGACATTCCACTACGGGAATGATTGAACGATTCCAGTACGAACGTATG
ATCAAACCGAGATGTGGCAGGCAATACCACTTTGTTCTGTTCATCGTAGGATTCCTGTTGGGTGTAGTTGTAGTTATAGTATCTAGTCAGATAGGTGGACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCTTTACTCTCTGTCTGTTCACGCGTTTTTGATTCCAGCACTCTTCACCATTCTTTTCGTCTTCCTCTTCGTCTCCTCCCTCATCTCTGATCTCGCATGGCATAT
GGGGGGGAAAAAGTTCTTCGTCGTATTCGTTGGGTGTTTGCCAGGTGTGTACCTGACATGGTACGAATGTTCTAGTCAAGTGAACGGATTTAGTGGGTCAATTTACTGCT
CGTACGACACGATCGAGGACGTGAAAGCAGCATATATGACATACATGGAGAACGTCGAGGGTCGACATTCCACTACGGGAATGATTGAACGATTCCAGTACGAACGTATG
ATCAAACCGAGATGTGGCAGGCAATACCACTTTGTTCTGTTCATCGTAGGATTCCTGTTGGGTGTAGTTGTAGTTATAGTATCTAGTCAGATAGGTGGACCATAA
Protein sequenceShow/hide protein sequence
MRLYSLSVHAFLIPALFTILFVFLFVSSLISDLAWHMGGKKFFVVFVGCLPGVYLTWYECSSQVNGFSGSIYCSYDTIEDVKAAYMTYMENVEGRHSTTGMIERFQYERM
IKPRCGRQYHFVLFIVGFLLGVVVVIVSSQIGGP