CuGenDBv2

Gene ID	Lag0040766
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein downstream neighbor of Son-like isoform X1
Genome location	chr13:8069428..8070986
RNA-Seq Expression	Lag0040766
Synteny	Lag0040766
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6580781.1 40S ribosomal protein S5, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-52

65.22

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Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

XP_022934041.1 protein downstream neighbor of Son-like isoform X1 [Cucurbita moschata]

5.7e-52

65.22

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Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

XP_022934045.1 protein downstream neighbor of Son-like isoform X2 [Cucurbita moschata]

5.7e-52

65.22

Show/hide

Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

XP_023527704.1 protein downstream neighbor of Son-like isoform X1 [Cucurbita pepo subsp. pepo]

5.7e-52

65.22

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Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

XP_023527707.1 protein downstream neighbor of Son-like isoform X2 [Cucurbita pepo subsp. pepo]

5.7e-52

65.22

Show/hide

Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DDD8 protein downstream neighbor of son homolog

4.4e-50

64.25

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Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        MAKV APSSLP  S DI GGA K GKSIRRKTPSELRGEQLKR+ DLDLLDESPS+VFASN             RNPRYIDTRMDEV+PVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++  S  KG+SVGSADV+H +T  +SQTVENSSQSIFRSVTELSSG +K +GLTCIDM KALKGLAARET AVSSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        SYS K+S
Subjt:  SYSSKRS

A0A6J1F6J4 protein downstream neighbor of Son-like isoform X2

2.8e-52

65.22

Show/hide

Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

A0A6J1F6J6 protein downstream neighbor of Son-like isoform X1

2.8e-52

65.22

Show/hide

Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KTGKS RRKTPSELRGEQLKR+N+LD  DESPSTVFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDKT  SSQT+ENSSQSIFRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKT--SSQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

A0A6J1J5S2 protein downstream neighbor of Son-like isoform X1

4.4e-50

63.29

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Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KT KS RRKTPSELRGEQLKR+N+LD LDESPS VFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKTS--SQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDK    SQT+ENSSQS+FRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKTS--SQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

A0A6J1J680 protein downstream neighbor of Son-like isoform X2

4.4e-50

63.29

Show/hide

Query:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----
        M +V APSSLPSASHDIAGGA KT KS RRKTPSELRGEQLKR+N+LD LDESPS VFASN             RNP+YIDTRMDEVFPVK   L     
Subjt:  MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASN-------------RNPRYIDTRMDEVFPVKNLGLG----

Query:  -------------------SYLEDITPS--KGSSVGSADVSHDKTS--SQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP
                           S L ++T S  KG+SVG ADV+HDK    SQT+ENSSQS+FRSVT+LSSG DK TGLT IDMGKALKGL A ET A+SSLP
Subjt:  -------------------SYLEDITPS--KGSSVGSADVSHDKTS--SQTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLP

Query:  SYSSKRS
        S SSKRS
Subjt:  SYSSKRS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G54750.1 unknown protein

2.5e-13

37.13

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Query:  RRKTPSELRGEQLKRTNDLDLLDESPSTV--------------FASNRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITPS
        +RKTPSELRGEQLKRT  +D   E+   +                 ++NP+YI+ RMDE++PVK                      +L   S L ++  +
Subjt:  RRKTPSELRGEQLKRTNDLDLLDESPSTV--------------FASNRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITPS

Query:  KGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE
        K   +      S +V  D  +   QT E  SQSIFRSVT+LS+  ++L+ L  IDM KALKGLA  E
Subjt:  KGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE

AT3G54750.2 unknown protein

2.5e-13

37.13

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Query:  RRKTPSELRGEQLKRTNDLDLLDESPSTV--------------FASNRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITPS
        +RKTPSELRGEQLKRT  +D   E+   +                 ++NP+YI+ RMDE++PVK                      +L   S L ++  +
Subjt:  RRKTPSELRGEQLKRTNDLDLLDESPSTV--------------FASNRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITPS

Query:  KGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE
        K   +      S +V  D  +   QT E  SQSIFRSVT+LS+  ++L+ L  IDM KALKGLA  E
Subjt:  KGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE

AT3G54750.3 unknown protein

1.9e-13

38.1

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Query:  RRKTPSELRGEQLKRTNDLDLLDES-----PSTVFAS----------NRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITP
        +RKTPSELRGEQLKRT  +D   E+     P    A           ++NP+YI+ RMDE++PVK                      +L   S L ++  
Subjt:  RRKTPSELRGEQLKRTNDLDLLDES-----PSTVFAS----------NRNPRYIDTRMDEVFPVK----------------------NLGLGSYLEDITP

Query:  SKGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE
        +K   +      S +V  D  +   QT E  SQSIFRSVT+LS+  ++L+ L  IDM KALKGLA  E
Subjt:  SKGSSV-----GSADVSHDKTSS--QTVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARE

Sequences

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CDS sequence

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ATGGCAAAAGTCGCTGCTCCAAGTTCGTTACCTTCAGCTTCTCATGATATTGCCGGAGGAGCTCTAAAGACTGGGAAATCAATTAGAAGAAAGACCCCATCAGAACTAAG
GGGAGAACAGTTAAAGAGAACAAATGATTTGGATCTTTTGGACGAATCTCCTTCCACTGTTTTTGCTTCTAACAGAAATCCAAGATACATTGATACACGCATGGATGAGG
TATTTCCAGTAAAAAATCTAGGCTTAGGATCTTATCTGGAAGACATAACGCCAAGTAAGGGGAGTTCTGTGGGTTCTGCTGATGTTTCCCATGATAAGACATCTTCTCAA
ACAGTTGAGAACAGTAGCCAAAGCATATTTCGAAGTGTCACTGAGCTCTCATCTGGCAGTGACAAATTGACAGGCTTGACATGCATAGATATGGGTAAAGCATTAAAAGG
ACTTGCTGCTCGTGAAACCAATGCAGTTTCTAGTTTACCATCGTACTCTTCCAAGAGATCCACGATGCTTCATCTGCTTATTCTAGTGATTTCTGCAGTGAAAGCTGCAT
ACTAG

mRNA sequence

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Protein sequence

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MAKVAAPSSLPSASHDIAGGALKTGKSIRRKTPSELRGEQLKRTNDLDLLDESPSTVFASNRNPRYIDTRMDEVFPVKNLGLGSYLEDITPSKGSSVGSADVSHDKTSSQ
TVENSSQSIFRSVTELSSGSDKLTGLTCIDMGKALKGLAARETNAVSSLPSYSSKRSTMLHLLILVISAVKAAY

Lag0040766 (gene) of Sponge gourd (AG-4) v1 genome