| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035697.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.4e-34 | 45.33 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------------------NPKKKENLATSYC--IDVEEVD------
K+PE++ KVDD YCKYH VI HPVE+C + + ++KE L + C I + EVD
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------------------NPKKKENLATSYC--IDVEEVD------
Query: ----NSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
NS + +Q TSVF+RIKP TTR S+FQR+SMA EEENQ TST+ SAF+RL +S SKK +PSTS FDRLK+T+DQ +++M L+ K F E N D
Subjt: ----NSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
Query: KKLHSSVPSRMKRKFSVLITTEGSL
K+HS V SRMKRK SV I TEGSL
Subjt: KKLHSSVPSRMKRKFSVLITTEGSL
|
|
| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-34 | 43.72 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI--------------------------------NPKK----------------------------KENLAT
KRPE+ KVDDP YCKYHRVI HPVE+C + NP K +E L
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI--------------------------------NPKK----------------------------KENLAT
Query: SYC-----IDVE-------EVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ C ++V+ EV+NS + QRTSVFDRIKP TTR SVFQR+S+A EEENQC TR S +RLS+ST KK +PSTS FDRLK+T+DQ
Subjt: SYC-----IDVE-------EVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
+R+M + + K F E N D K+HS VPSRMKRK V I TEGSL P
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.0e-37 | 46.58 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERC-----------------------------------GINPK------------KKENLATSYC-----IDV--
KRPE+ KVDDP YCKYHRVI H +E+C ++P +E L + C ++V
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERC-----------------------------------GINPK------------KKENLATSYC-----IDV--
Query: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
EEVDNS + +QRT VFDRIKP TTR SVFQR+SMA EEE QC ST TR S F+RLS+STSKK +PSTS FDRLK+T+DQ +++M +L+ K F
Subjt: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
Query: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
E N D K+HS VPSR KRK SV I TEGSL P
Subjt: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.6e-36 | 46.15 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------NPKKKENLA----------------------TSYCIDV--
KRP + KVDDP YCKYHRVI HPVE+C + P++ LA T+ ++V
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------NPKKKENLA----------------------TSYCIDV--
Query: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
EEVDNS + +QRTSVFDRIKP TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R+M +L+ K F
Subjt: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
Query: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
E N D K+HS +PS RK SV I EGSL P
Subjt: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| KAA0066166.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 1.3e-35 | 44.44 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGINPKKKENLATSYCIDV------------------------------------------------------
KRP++ KVDDP YCKYHRVI HPVE+C + K LA I++
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGINPKKKENLATSYCIDV------------------------------------------------------
Query: EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
EEVDNS + +QRT VFDRIKP TR S+FQR SMA EE+NQC MSTST+ SAF+RLS+STSK+ +P TS FDRLK+T+DQ +R+M L+ K F E N D
Subjt: EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
Query: KKLHSSVPSRMKRKFSVLITTEGSL
K+++ VPS MKRK + T GS+
Subjt: KKLHSSVPSRMKRKFSVLITTEGSL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 6.8e-35 | 43.72 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI--------------------------------NPKK----------------------------KENLAT
KRPE+ KVDDP YCKYHRVI HPVE+C + NP K +E L
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI--------------------------------NPKK----------------------------KENLAT
Query: SYC-----IDVE-------EVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ C ++V+ EV+NS + QRTSVFDRIKP TTR SVFQR+S+A EEENQC TR S +RLS+ST KK +PSTS FDRLK+T+DQ
Subjt: SYC-----IDVE-------EVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
+R+M + + K F E N D K+HS VPSRMKRK V I TEGSL P
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 1.2e-36 | 46.15 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------NPKKKENLA----------------------TSYCIDV--
KRP + KVDDP YCKYHRVI HPVE+C + P++ LA T+ ++V
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------NPKKKENLA----------------------TSYCIDV--
Query: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
EEVDNS + +QRTSVFDRIKP TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ +R+M +L+ K F
Subjt: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
Query: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
E N D K+HS +PS RK SV I EGSL P
Subjt: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| A0A5A7VII4 Retrotransposon gag protein | 6.2e-36 | 44.44 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGINPKKKENLATSYCIDV------------------------------------------------------
KRP++ KVDDP YCKYHRVI HPVE+C + K LA I++
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGINPKKKENLATSYCIDV------------------------------------------------------
Query: EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
EEVDNS + +QRT VFDRIKP TR S+FQR SMA EE+NQC MSTST+ SAF+RLS+STSK+ +P TS FDRLK+T+DQ +R+M L+ K F E N D
Subjt: EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
Query: KKLHSSVPSRMKRKFSVLITTEGSL
K+++ VPS MKRK + T GS+
Subjt: KKLHSSVPSRMKRKFSVLITTEGSL
|
|
| A0A5D3CA53 Retrotransposon gag protein | 5.0e-38 | 46.58 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERC-----------------------------------GINPK------------KKENLATSYC-----IDV--
KRPE+ KVDDP YCKYHRVI H +E+C ++P +E L + C ++V
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERC-----------------------------------GINPK------------KKENLATSYC-----IDV--
Query: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
EEVDNS + +QRT VFDRIKP TTR SVFQR+SMA EEE QC ST TR S F+RLS+STSKK +PSTS FDRLK+T+DQ +++M +L+ K F
Subjt: -----EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFD
Query: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
E N D K+HS VPSR KRK SV I TEGSL P
Subjt: EVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFIP
|
|
| A0A5D3E4T1 Retrotransposon gag protein | 1.2e-34 | 45.33 | Show/hide |
Query: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------------------NPKKKENLATSYC--IDVEEVD------
K+PE++ KVDD YCKYH VI HPVE+C + + ++KE L + C I + EVD
Subjt: KRPEEMEKVDDPKYCKYHRVIGHPVERCGI------------------------------------------NPKKKENLATSYC--IDVEEVD------
Query: ----NSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
NS + +Q TSVF+RIKP TTR S+FQR+SMA EEENQ TST+ SAF+RL +S SKK +PSTS FDRLK+T+DQ +++M L+ K F E N D
Subjt: ----NSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
Query: KKLHSSVPSRMKRKFSVLITTEGSL
K+HS V SRMKRK SV I TEGSL
Subjt: KKLHSSVPSRMKRKFSVLITTEGSL
|
|
