; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040796 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040796
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:8424809..8426224
RNA-Seq ExpressionLag0040796
SyntenyLag0040796
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDS09552.1 hypothetical protein LRAMOSA10912 [Lichtheimia ramosa]6.4e-0730.3Show/hide
Query:  KGLGRPKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFP----SL
        +G GRP+K  S+S +       A   + +  GRPR +P            A T + +  GRPRK+P            A TP+ +  GRPRK+P    S+
Subjt:  KGLGRPKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFP----SL

Query:  SSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFP---SLSSSCHGHPRVR
        S++     RG         GRPRK+P   ++  +      T + +G GRPRK+P    +    P      LG   GRPRK P    L +S +  P ++
Subjt:  SSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFP---SLSSSCHGHPRVR

PWV06054.1 hypothetical protein C3747_120g5 [Trypanosoma cruzi]5.8e-0830.68Show/hide
Query:  PKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPR
        P++ PS S++ HS PR   +L      + R  PS S++ H                PR+ PS S++ H  PR   +       + R+ PSLS++ H  PR
Subjt:  PKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPR

Query:  GAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFPSLS
           +P       PR+ P  S++ HS PR   +L   G   PR+ PS  ++ H  PR   +        PR+ PSLS
Subjt:  GAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFPSLS

ROO56678.1 hypothetical protein EDB58_104235 [Vibrio crassostreae]3.9e-0431.4Show/hide
Query:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP
        +L SS HS+P  A++LL      P    SL +S H +P  A++LL      P    SL +S + +P  A++ L      P    +L SS H +P  A++ 
Subjt:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP

Query:  LGKSLGRPRKFPGLSSSCHSH
        L      P     L +S HS+
Subjt:  LGKSLGRPRKFPGLSSSCHSH

ROP23230.1 hypothetical protein EDB33_103336 [Vibrio crassostreae]2.3e-0431.4Show/hide
Query:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP
        +L SS HS+P  A++LL      P    SL +S H +P  A++LL      P    SL +S + +P  A++ L      P    +L SS H +P  A++ 
Subjt:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP

Query:  LGKSLGRPRKFPGLSSSCHSH
        L      P     L +S HS+
Subjt:  LGKSLGRPRKFPGLSSSCHSH

ROR26620.1 hypothetical protein EDB67_10236 [Vibrio crassostreae]2.1e-0530.2Show/hide
Query:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP
        +L SS HS+P  A++LL      P    SL +S H +P  A+ L       P    SL +S H +P  A++ L      P    SL +S H +P  A+  
Subjt:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP

Query:  LGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGH
                     L SS HS+P  A++LL      P    +L +S H +
Subjt:  LGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGH

TrEMBL top hitse value%identityAlignment
A0A077WSB6 Uncharacterized protein3.1e-0730.3Show/hide
Query:  KGLGRPKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFP----SL
        +G GRP+K  S+S +       A   + +  GRPR +P            A T + +  GRPRK+P            A TP+ +  GRPRK+P    S+
Subjt:  KGLGRPKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFP----SL

Query:  SSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFP---SLSSSCHGHPRVR
        S++     RG         GRPRK+P   ++  +      T + +G GRPRK+P    +    P      LG   GRPRK P    L +S +  P ++
Subjt:  SSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFP---SLSSSCHGHPRVR

A0A2V2WH94 Uncharacterized protein2.8e-0830.68Show/hide
Query:  PKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPR
        P++ PS S++ HS PR   +L      + R  PS S++ H                PR+ PS S++ H  PR   +       + R+ PSLS++ H  PR
Subjt:  PKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPR

Query:  GAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFPSLS
           +P       PR+ P  S++ HS PR   +L   G   PR+ PS  ++ H  PR   +        PR+ PSLS
Subjt:  GAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFPSLS

A0A560Y1X7 Uncharacterized protein2.5e-0431.4Show/hide
Query:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP
        +L SS HS+P  A++L       P    SL +S H +P  A++LL      P    SL +S H +P  A++ L      P    +L SS H +P  A++ 
Subjt:  SLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTP

Query:  LGKSLGRPRKFPGLSSSCHSH
        L      P     L +S HS+
Subjt:  LGKSLGRPRKFPGLSSSCHSH

Q0Q5Z9 Hypothetical accessory gland protein (Fragment)9.4e-0437.59Show/hide
Query:  SLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCH
        S GRPR FP+     HG           S GRPR+FP+       H R  + P   S GRPR+FP+         R  + P   S GRPR+FP      H
Subjt:  SLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCH

Query:  SHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRG
          P G Y   G   GRPR+FP+     HGH  G
Subjt:  SHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCCTTGGAGTTAGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCCTCTCTTCAAGCTG
TCACAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAAAGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTTTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCCTCTGGGGAAAAGCTTGGGGAGG
CCCAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCCTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTC
AAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCCCTTCAAGCTGTCACGGTCATCCCAGGGGTG
CGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGTTGTCACGGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAGGCTTGG
GGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCACGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTC
TCTTCAAGCTGTTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCTCTACAAGGATCATTCTCGTCTGGCCACACACGTTTCATCCTA
TGGAAAAAGCACTTTATGCGAAACACAATGCAAAGAACTTCATTAAATTCGCAAGTGTCGACATCGTACCACGAAGAAGCACCATGGACATGTGTTATACAAAACGAAAG
GAAAATCAAAACTGCCGCCACGTGACCGTGGACTCGACCTGTCTTTACCCCTACCCCCCACTCAAAATGTGCATTCAATATCTTGGACATGAATTTTTTGAGTCAGGAAA
AACTAACTTCGTACCTGGGCCTCTAAGGGTAGAGCTCGGCCTTGACCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCCTCTGTGCTGTTCGTTTGCT
TGTTTTCCATCCCAAGGGTGCATGCACTTAGTCGGAGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGCTGTTGTATTCATCCCAGGAGGTGCATACA
TTCTTTTGGGGACCCTGGGAGGTTGAGGGCATGCGTCAACCTCTCTGCAAGAATTTTGTCTATGCAAGAATCATTCTTATGCAAAACACAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCCTTGGAGTTAGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCCTCTCTTCAAGCTG
TCACAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAAAGCTTGGGGAGGCCCAGGAAATTCCCGAGCCTTTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCCTCTGGGGAAAAGCTTGGGGAGG
CCCAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCCTCTGGGAAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTC
AAGCTGTCATAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCCCTTCAAGCTGTCACGGTCATCCCAGGGGTG
CGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGTTGTCACGGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAGGCTTGG
GGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCACGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTC
TCTTCAAGCTGTTGTATTCATCCCGAGAGTGCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCTCTACAAGGATCATTCTCGTCTGGCCACACACGTTTCATCCTA
TGGAAAAAGCACTTTATGCGAAACACAATGCAAAGAACTTCATTAAATTCGCAAGTGTCGACATCGTACCACGAAGAAGCACCATGGACATGTGTTATACAAAACGAAAG
GAAAATCAAAACTGCCGCCACGTGACCGTGGACTCGACCTGTCTTTACCCCTACCCCCCACTCAAAATGTGCATTCAATATCTTGGACATGAATTTTTTGAGTCAGGAAA
AACTAACTTCGTACCTGGGCCTCTAAGGGTAGAGCTCGGCCTTGACCTCTGGATGGTCGGCCTCGGCCTTGGCATGAGGCCGACCAGCTCCTCTGTGCTGTTCGTTTGCT
TGTTTTCCATCCCAAGGGTGCATGCACTTAGTCGGAGAAAACTTGGGGAGGTCGAGGAAATTTCCGAGCCTCTCTTCAAGCTGTTGTATTCATCCCAGGAGGTGCATACA
TTCTTTTGGGGACCCTGGGAGGTTGAGGGCATGCGTCAACCTCTCTGCAAGAATTTTGTCTATGCAAGAATCATTCTTATGCAAAACACAATATAA
Protein sequenceShow/hide protein sequence
MVGLGVRMFGLGMTMRTLFWGKGLGRPKKFPSLSSSCHSHPRGAYTLLGKSLGRPRNFPSLSSSCHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTPLGKSLGR
PRKFPSLSSSCHGHPRGAYTPLGKSLGRPRKFPGLSSSCHSHPRGAYTLLGKGLGRPRKFPSLPSSCHGHPRGAYTLLGKGLGRPRKFPSLSSSCHGHPRVRTLFWGKAW
GGQGNSRASLQAVTVIPGVRTLFWGKAWGGQGNSRASLQAVVFIPRVHTLSRGKCGSLASTRIILVWPHTFHPMEKALYAKHNAKNFIKFASVDIVPRRSTMDMCYTKRK
ENQNCRHVTVDSTCLYPYPPLKMCIQYLGHEFFESGKTNFVPGPLRVELGLDLWMVGLGLGMRPTSSSVLFVCLFSIPRVHALSRRKLGEVEEISEPLFKLLYSSQEVHT
FFWGPWEVEGMRQPLCKNFVYARIILMQNTI