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Lag0040818 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040818
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncyclic dof factor 3-like
Genome locationchr13:8623783..8625013
RNA-Seq ExpressionLag0040818
SyntenyLag0040818
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589512.1 Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia]7.8e-0881.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEI LPAD EVPLIE+DDSDSSS KE  D AV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

XP_022987186.1 cyclic dof factor 3-like [Cucurbita maxima]7.8e-0881.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEI LPAD EVPLIE+DDSDSSS KE  D AV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

XP_023516313.1 cyclic dof factor 3-like [Cucurbita pepo subsp. pepo]7.8e-0881.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEI LPAD EVPLIE+DDSDSSS KE  D AV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

XP_023531924.1 cyclic dof factor 3-like [Cucurbita pepo subsp. pepo]3.5e-0879.55Show/hide
Query:  IKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        IKD AI+IFGKEIPLPADSE PL+E+DDSDSSS+KE  DGAV K
Subjt:  IKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

XP_038879380.1 cyclic dof factor 3 [Benincasa hispida]7.0e-0981.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEIPLPAD EV LI++DDSDS+SDKET DGA+ K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

TrEMBL top hitse value%identityAlignment
A0A6J1BZY6 cyclic dof factor 3-like1.4e-0777.08Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEIPLPAD E+PLIE+DDSDSSS+K+   GA  K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

A0A6J1E146 cyclic dof factor 3-like3.8e-0881.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEI LPAD EVPLIE+DDSDSSS KE  D AV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

A0A6J1F026 cyclic dof factor 3-like isoform X13.5e-0668.75Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE +KD AI+IFGK+IPLPAD E PL+++DD DSSS+KE  DGAV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

A0A6J1IC93 cyclic dof factor 3-like4.9e-0877.27Show/hide
Query:  IKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        IKD AI+IFGK+IPLPADSE PL+E+DDSDSSS+KE  DGAV K
Subjt:  IKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

A0A6J1JDF4 cyclic dof factor 3-like3.8e-0881.25Show/hide
Query:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK
        MLE IKDPAIKIFGKEI LPAD EVPLIE+DDSDSSS KE  D AV K
Subjt:  MLEIIKDPAIKIFGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCGGTGAGGTCGTCGTCGACGTGGGAGTGGTGGTCGTTGAGGTCGAGGTTGTGCATGTGGGCGGCCTTGGCGGCGGCGGCTTGGACGTCGCGAGGGGCGAGGGA
GACGGGGCGGGGGAGGAGGTGGAGGAGGTCGGGGAAATTGAGGGTGGCGGAGGACCGAGTTGCCCAATGCCAGCGGAGACTCACAATATCCAATTCCTCTTCTTCTTCTT
CTTCTTCGCTCTCTTTCTATTTTCCTTCTGCTAATTTTCTCGCGCTCTTTTTCCTTTTCATTTCGTCTGCAAAAATGCTGGAAATTATTAAGGACCCTGCCATTAAAATC
TTCGGCAAGGAGATTCCGCTTCCGGCTGACTCTGAAGTTCCCTTGATCGAAACCGATGATTCGGATTCCAGTTCCGACAAAGAAACACCAGATGGAGCAGTGGCAAAGGT
ACAGTTCAGTCAATCAAGAATTTTGTGTGCTCTGTTAATGAAACCTGAATTCAACCTGCTTGTTTTAGCGAATTTCGTACTAGTGTTACTCGATAGAATAAGATATCTCA
TTTTACTAGAAACGTCGATTTTTGAATCACCAGCATCTCTTCCTCGTTTGTTGAGATTGAAATGGAACTCTTCATATATACCTCTCAGAAAGACCGGTAGGGAGAAAGAA
CTCATGTCGGATATAAAGCAAGGATCACTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGCCCTAAAACTGCTTTCCCCCCAGAAGCATCCATA
CCACAGTGCGGCCCGTTCCCTTAACTATTTTAAGGGACGCAGGCGGATAGGATGCTTCCTTTTTGTTCTTGCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCGGTGAGGTCGTCGTCGACGTGGGAGTGGTGGTCGTTGAGGTCGAGGTTGTGCATGTGGGCGGCCTTGGCGGCGGCGGCTTGGACGTCGCGAGGGGCGAGGGA
GACGGGGCGGGGGAGGAGGTGGAGGAGGTCGGGGAAATTGAGGGTGGCGGAGGACCGAGTTGCCCAATGCCAGCGGAGACTCACAATATCCAATTCCTCTTCTTCTTCTT
CTTCTTCGCTCTCTTTCTATTTTCCTTCTGCTAATTTTCTCGCGCTCTTTTTCCTTTTCATTTCGTCTGCAAAAATGCTGGAAATTATTAAGGACCCTGCCATTAAAATC
TTCGGCAAGGAGATTCCGCTTCCGGCTGACTCTGAAGTTCCCTTGATCGAAACCGATGATTCGGATTCCAGTTCCGACAAAGAAACACCAGATGGAGCAGTGGCAAAGGT
ACAGTTCAGTCAATCAAGAATTTTGTGTGCTCTGTTAATGAAACCTGAATTCAACCTGCTTGTTTTAGCGAATTTCGTACTAGTGTTACTCGATAGAATAAGATATCTCA
TTTTACTAGAAACGTCGATTTTTGAATCACCAGCATCTCTTCCTCGTTTGTTGAGATTGAAATGGAACTCTTCATATATACCTCTCAGAAAGACCGGTAGGGAGAAAGAA
CTCATGTCGGATATAAAGCAAGGATCACTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGCCCTAAAACTGCTTTCCCCCCAGAAGCATCCATA
CCACAGTGCGGCCCGTTCCCTTAACTATTTTAAGGGACGCAGGCGGATAGGATGCTTCCTTTTTGTTCTTGCTCCTTGA
Protein sequenceShow/hide protein sequence
MISVRSSSTWEWWSLRSRLCMWAALAAAAWTSRGARETGRGRRWRRSGKLRVAEDRVAQCQRRLTISNSSSSSSSSLSFYFPSANFLALFFLFISSAKMLEIIKDPAIKI
FGKEIPLPADSEVPLIETDDSDSSSDKETPDGAVAKVQFSQSRILCALLMKPEFNLLVLANFVLVLLDRIRYLILLETSIFESPASLPRLLRLKWNSSYIPLRKTGREKE
LMSDIKQGSLDSQDDSPPFYQLQHEALKLLSPQKHPYHSAARSLNYFKGRRRIGCFLFVLAP