CuGenDBv2

Gene ID	Lag0040829
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr13:8731832..8732380
RNA-Seq Expression	Lag0040829
Synteny	Lag0040829
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8678064.1 Glycosyltransferase, CAZy family GT8 [Hibiscus syriacus]

2.2e-40

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDG +F  WKMQ+ D+L  K +++ L  ++P+GM NEDW  LD +A+  IR+ LS +VA  +A E T   LM AL++ YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         FN++M+E ASV  ++NE+ T+  +L SV+IEF DEV A+ LL+SLPDSW    T +S+S+GN+ LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

KAE8691144.1 hypothetical protein F3Y22_tig00110893pilonHSYRG01319 [Hibiscus syriacus]

1.7e-40

50.55

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDG NF  WKMQ+ D+L  K +++ L  ++P+GM NEDW  LD +A+  IR+ LS +VA  +A E T   LM AL++ YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         FN++M+E ASV  ++NE+ T+  +L SV+IEF DEV A+ LL+SLPDSW    T +S+S+GN+ LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]

2.2e-40

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Query:  FDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSE
        FDG +F  W+MQ+ DYL  KK+H+ L  +P+ M  E+W+ LD + +  IR+ LS +VA  VA E T   LM+ L++ YEKPSANNKV+L+KK F+++M E
Subjt:  FDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSE

Query:  DASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
           V +++NE  T+ N+L SV+IEF DEV A+ LL SLP+SWE M+  +SNS GN  LKF+ V D  + EE+RR
Subjt:  DASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]

2.2e-40

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Query:  FDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSE
        FDG +F  W+MQ+ DYL  KK+H+ L  +P+ M  E+W+ LD + +  IR+ LS +VA  VA E T   LM+ L++ YEKPSANNKV+L+KK F+++M E
Subjt:  FDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSE

Query:  DASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
           V +++NE  T+ N+L SV+IEF DEV A+ LL SLP+SWE M+  +SNS GN  LKF+ V D  + EE+RR
Subjt:  DASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

TKR90717.1 hypothetical protein D5086_0000230290 [Populus alba]

2.2e-40

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Query:  FDGKNFECWKMQVNDYLTCKKIH-KALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMS
        FDG NF  WKMQ+ DYL  KK+H   L  +P+ M  E+W+ LD + +  IR+ LS  VA  V  E +  KLMEAL+  YEKPSANNKV+L+KK FN++M 
Subjt:  FDGKNFECWKMQVNDYLTCKKIH-KALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMS

Query:  EDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
        E+ASV  ++N   T+ N+L SV IEF DE+ A+ LL SLP SWE M+T +SNS G + LK+  + DL +AEE+RR
Subjt:  EDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

TrEMBL top hits

e value

%identity

Alignment

A0A6A2YKP4 Glycosyltransferase, CAZy family GT8

1.1e-40

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDG +F  WKMQ+ D+L  K +++ L  ++P+GM NEDW  LD +A+  IR+ LS +VA  +A E T   LM AL++ YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         FN++M+E ASV  ++NE+ T+  +L SV+IEF DEV A+ LL+SLPDSW    T +S+S+GN+ LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

A0A6A2ZGN6 Uncharacterized protein

8.3e-41

50.55

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDG NF  WKMQ+ D+L  K +++ L  ++P+GM NEDW  LD +A+  IR+ LS +VA  +A E T   LM AL++ YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALK-ERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         FN++M+E ASV  ++NE+ T+  +L SV+IEF DEV A+ LL+SLPDSW    T +S+S+GN+ LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

A0A803L9T0 Uncharacterized protein

1.3e-41

51.1

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDGK+FE WKMQ+ DYL  KK+++ L+E +P GM   +W+ LD +A+  IR  LS +VA  +A ETT   LM+AL+N YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         F+++MSE  SV  ++NE+ ++  +L SV+I+F DEV A+ LL+SLPDSW    T +S+S+GNN LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

A0A803M3U1 Uncharacterized protein

4.8e-41

50.55

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDGK+F  WKMQ+ DYL  KK+++ L+E +P GM   +W+ LD +A+  IR+ LS +VA  +A ETT   LM+AL+N YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         F+++MSE  SV  ++NE+ ++  +L SV+I+F DEV A+ LL+SLPDSW    T +S+S+GNN LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

A0A803MP45 Uncharacterized protein

1.1e-40

50.55

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Query:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        G V+   FDGK+F  WKMQ+ DYL  KK+++ L+E +P GM   +W+ LD +A+  IR+ LS +VA  +A ETT   LM+AL+N YEKPSA+NKV+L+++
Subjt:  GFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKE-RPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         F+++MSE  SV  ++NE+  +  +L SV+I+F DEV A+ LL+SLPDSW    T +S+S+GNN LKF  V DL ++EEIRR
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

5.5e-18

32.42

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Query:  EPRNFDGKN-FECWKMQVNDYLTCKKIHKAL---KERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK
        E   F+G N F  W+ ++ D L  + +HK L    ++P  M  EDW  LDE A ++IR+ LS DV + +  E TA  +   L + Y   +  NK+YL K+
Subjt:  EPRNFDGKN-FECWKMQVNDYLTCKKIHKAL---KERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKK

Query:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR
         + + MSE  +  S++N    L  +L ++ ++  +E  AI LL SLP S++ + TT+ +  G  T++   V    +  E  R
Subjt:  FFNMQMSEDASVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

2.0e-10

36.05

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Query:  DGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKV
        DG ++   +M++ DYL  KK+H+ L ++ + M+ +DW  L  + +  IR+ +S ++A  VA E +   LM+ L++ Y+KPS NN V
Subjt:  DGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKV

Sequences

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CDS sequence

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ATGGGTTTTGTAGAGCCAAGAAACTTCGATGGGAAAAATTTTGAGTGTTGGAAAATGCAAGTCAATGATTACCTAACTTGCAAGAAAATACATAAGGCATTGAAGGAGAG
ACCGAAAGGGATGACGAACGAAGATTGGGAAGCTTTGGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGACGTGGCAAGTCTAGTGGCCCATGAGACAA
CTGCAGTTAAATTGATGGAAGCGCTTACAAATAGGTATGAAAAACCCTCGGCTAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTGAGGATGCT
TCTGTGAATTCCTATATTAATGAGGTTACCACTTTGTTTAATCGGTTAAAATCTGTTAAGATAGAATTTATTGATGAGGTGAATGCTATTCAGTTGTTAACGTCTTTACC
TGATAGTTGGGAAACGATGAAGACAACATTGTCTAATTCGACTGGAAATAATACTTTAAAATTTTTAAAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGTAG

mRNA sequence

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Protein sequence

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MGFVEPRNFDGKNFECWKMQVNDYLTCKKIHKALKERPKGMTNEDWEALDEEAVASIRMCLSMDVASLVAHETTAVKLMEALTNRYEKPSANNKVYLVKKFFNMQMSEDA
SVNSYINEVTTLFNRLKSVKIEFIDEVNAIQLLTSLPDSWETMKTTLSNSTGNNTLKFLKVCDLAIAEEIRR

Lag0040829 (gene) of Sponge gourd (AG-4) v1 genome