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Lag0040863 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040863
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr13:9122163..9122970
RNA-Seq ExpressionLag0040863
SyntenyLag0040863
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7840310.1 hypothetical protein G2W53_002608 [Senna tora]2.7e-1640.38Show/hide
Query:  KPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPR--KFRCGRCRLPGHNSRSCKGPVKKRSR
        KPE+FV   Y K+  +  Y  ++ P NG  +WP+   +P++PP ++RPPGRP+KQRK++ +E    +N   R  + RC +C+L GHN R+CKGP  K+++
Subjt:  KPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPR--KFRCGRCRLPGHNSRSCKGPVKKRSR

Query:  KASS
         + +
Subjt:  KASS

RHN38980.1 putative transcription factor interactor and regulator CCHC(Zn) family [Medicago truncatula]1.9e-1745.13Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR
        +CI+Y KK P+++V   YRK   ++TY++ +LP NG  LWP+    PILPP +RR P RP+KQRK+ +DE        AG+SSN   +P++     +CGR
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR

Query:  CRLPGHNSRSCKG
        C   GHN R+C G
Subjt:  CRLPGHNSRSCKG

RHN71616.1 putative transcription factor interactor and regulator CCHC(Zn) family [Medicago truncatula]3.8e-1844.66Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPRK----FRCGRCRLPGHNSRS
        + IYY  + P+E+V   YRK+  ++TY +F++P NG  LWP+    PILPP +RR PGRP+K R++D+DE  ++++K  ++     RC RC+  GHN R+
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPRK----FRCGRCRLPGHNSRS

Query:  CKG
        CKG
Subjt:  CKG

XP_024628168.1 uncharacterized protein LOC112417192 [Medicago truncatula]1.9e-1745.13Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR
        +CI+Y KK P+++V   YRK   ++TY++ +LP NG  LWP+    PILPP +RR P RP+KQRK+ +DE        AG+SSN   +P++     +CGR
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR

Query:  CRLPGHNSRSCKG
        C   GHN R+C G
Subjt:  CRLPGHNSRSCKG

XP_039683764.1 uncharacterized protein LOC120576957 [Medicago truncatula]2.1e-1634.4Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR
        +CI+Y KK P+++V   YRK   ++TY++ +LP NG  LWP+    PILPP +RR PGRP+KQRK+ +DE        AG+SSN   +P++     +CGR
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR

Query:  CRLPGHNSRSCKGP-----VKKRSRKASSSTFMGFSIPCGTPSASGTAYTGTASAAEASYAAGTPYAVGHPSATSTPSDVGTPSAAGTPYTTGPPSATTT
        C + GHN+R+C        +       ++ T      P            G +  A  SY  GT       ++T+T +  G  +A     TT PP +TT 
Subjt:  CRLPGHNSRSCKGP-----VKKRSRKASSSTFMGFSIPCGTPSASGTAYTGTASAAEASYAAGTPYAVGHPSATSTPSDVGTPSAAGTPYTTGPPSATTT

Query:  PISAGTQSTPLGTTSAVT
        P  A T    L + S  T
Subjt:  PISAGTQSTPLGTTSAVT

TrEMBL top hitse value%identityAlignment
A0A2N9H0G1 Uncharacterized protein1.0e-1643.52Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK
        +CI+Y K++ + +VDD Y+  A  + Y   +LP+NG  +W KT   P+ PP +RRPPGRP+K R R+ DE  AGT   +     +C +C   GHN RSCK
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK

Query:  GPVKKRSR
        G V   S+
Subjt:  GPVKKRSR

A0A2N9HNE0 CCHC-type domain-containing protein1.7e-1638.29Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK
        +CI+Y K+K + +VDD Y+       Y   +LP+NG  +W KT   P+ PP +RRPPGRP+K   R+ DE  AGT   ++    +C +C   GHN RSCK
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK

Query:  GPVKKRSRKASSSTFMGFSIPCGTPSASGTAYTGTASAAEASYAAGTPYAVGHPSATSTPSDVGTPSAAGTPYTT
        G V   S K   +T     +  G   + G +    A+ A +S AA TP A    S TS+ S   TP AA +   T
Subjt:  GPVKKRSRKASSSTFMGFSIPCGTPSASGTAYTGTASAAEASYAAGTPYAVGHPSATSTPSDVGTPSAAGTPYTT

A0A2N9IJT2 Uncharacterized protein1.0e-1643.52Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK
        +CI+Y K++ + +VDD Y+  A  + Y   +LP+NG  +W KT   P+ PP +RRPPGRP+K R R+ DE  AGT   +     +C +C   GHN RSCK
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--AGTSSNKMPRKFRCGRCRLPGHNSRSCK

Query:  GPVKKRSR
        G V   S+
Subjt:  GPVKKRSR

A0A396GCJ3 Putative transcription factor interactor and regulator CCHC(Zn) family9.2e-1845.13Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR
        +CI+Y KK P+++V   YRK   ++TY++ +LP NG  LWP+    PILPP +RR P RP+KQRK+ +DE        AG+SSN   +P++     +CGR
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDE--------AGTSSN--KMPRK----FRCGR

Query:  CRLPGHNSRSCKG
        C   GHN R+C G
Subjt:  CRLPGHNSRSCKG

A0A396J0S1 Putative transcription factor interactor and regulator CCHC(Zn) family1.9e-1844.66Show/hide
Query:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPRK----FRCGRCRLPGHNSRS
        + IYY  + P+E+V   YRK+  ++TY +F++P NG  LWP+    PILPP +RR PGRP+K R++D+DE  ++++K  ++     RC RC+  GHN R+
Subjt:  SCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPRK----FRCGRCRLPGHNSRS

Query:  CKG
        CKG
Subjt:  CKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCTCGTTTTGCTGATGATGATGATGTATACAGAAAAAAGCACTCTAGCTGCATATATTATGTGAAAAAGAAGCCGGAAGAGTTTGTTGATGATGTATACAGAAA
AAAAGCACTCATGGAAACCTACTCCCATTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCAC
CTGGCCGACCTAGAAAACAGAGGAAACGAGATGATGATGAAGCTGGGACTTCAAGTAACAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAAC
TCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGGGACTCCATCTGCTTCTGGAACTGCTTA
TACTGGAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGTTGGACATCCATCTGCTACTTCAACTCCAAGTGATGTCGGGACTCCATCTGCTG
CTGGCACTCCATATACTACTGGACCTCCATCTGCTACTACAACTCCAATTTCTGCTGGGACTCAGTCAACACCTCTAGGAACTACATCTGCTGTGACAAGAAGAGGAATG
AAAAATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCTCGTTTTGCTGATGATGATGATGTATACAGAAAAAAGCACTCTAGCTGCATATATTATGTGAAAAAGAAGCCGGAAGAGTTTGTTGATGATGTATACAGAAA
AAAAGCACTCATGGAAACCTACTCCCATTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCAC
CTGGCCGACCTAGAAAACAGAGGAAACGAGATGATGATGAAGCTGGGACTTCAAGTAACAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAAC
TCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGGGACTCCATCTGCTTCTGGAACTGCTTA
TACTGGAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGTTGGACATCCATCTGCTACTTCAACTCCAAGTGATGTCGGGACTCCATCTGCTG
CTGGCACTCCATATACTACTGGACCTCCATCTGCTACTACAACTCCAATTTCTGCTGGGACTCAGTCAACACCTCTAGGAACTACATCTGCTGTGACAAGAAGAGGAATG
AAAAATAAGTGA
Protein sequenceShow/hide protein sequence
MVPRFADDDDVYRKKHSSCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEAGTSSNKMPRKFRCGRCRLPGHN
SRSCKGPVKKRSRKASSSTFMGFSIPCGTPSASGTAYTGTASAAEASYAAGTPYAVGHPSATSTPSDVGTPSAAGTPYTTGPPSATTTPISAGTQSTPLGTTSAVTRRGM
KNK