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Lag0040917 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040917
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPHD finger protein ALFIN-LIKE 2-like
Genome locationchr13:9739733..9740223
RNA-Seq ExpressionLag0040917
SyntenyLag0040917
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger
IPR044104 - Alfin1-like, PHD finger
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463243.1 PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo]2.6e-5893.22Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGS RNSN KLL+ESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICERW+HGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        AENIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

XP_011654991.1 PHD finger protein ALFIN-LIKE 2 [Cucumis sativus]2.0e-5893.22Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGS RNSN KLL+ESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICE+WFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        AENIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

XP_022156923.1 PHD finger protein ALFIN-LIKE 2-like [Momordica charantia]2.4e-5993.28Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        +INDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR +DGSIR+SN KLLDESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGRP
        AENIKQYKCP+CS KRGRP
Subjt:  AENIKQYKCPNCSMKRGRP

XP_022957000.1 PHD finger protein ALFIN-LIKE 2-like [Cucurbita moschata]7.0e-5994.07Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGSIRNSN KLLDESYG++EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        A+NIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

XP_038893084.1 PHD finger protein ALFIN-LIKE 2-like [Benincasa hispida]7.0e-5994.07Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR +DGSIRNSN KLL+ESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        AENIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

TrEMBL top hitse value%identityAlignment
A0A0A0KLX6 PHD-type domain-containing protein9.8e-5993.22Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGS RNSN KLL+ESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICE+WFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        AENIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

A0A5D3DUV1 PHD finger protein ALFIN-LIKE 2-like1.3e-5893.22Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGS RNSN KLL+ESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICERW+HGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        AENIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

A0A6J1DRX5 PHD finger protein ALFIN-LIKE 2-like1.2e-5993.28Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        +INDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR +DGSIR+SN KLLDESYG+DEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGRP
        AENIKQYKCP+CS KRGRP
Subjt:  AENIKQYKCPNCSMKRGRP

A0A6J1GZB1 PHD finger protein ALFIN-LIKE 2-like3.4e-5994.07Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGSIRNSN KLLDESYG++EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        A+NIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

A0A6J1J9S6 PHD finger protein ALFIN-LIKE 2-like3.4e-5994.07Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKR LDGSIRNSN KLLDESYG++EDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCSMKRGR
        A+NIKQYKCP+CS KRGR
Subjt:  AENIKQYKCPNCSMKRGR

SwissProt top hitse value%identityAlignment
A2Y0Q2 PHD finger protein ALFIN-LIKE 11.0e-3658.33Show/hide
Query:  MINDLPTLFEVASGRKAVK--DKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITP
        M+NDLPT++EV SG +  K  D+  MD+ S+++ S+K   D +   +N K  DE Y +D+ +H +TLCG+CGG Y+ADEFWIGCD+CERW+HGKCV+ITP
Subjt:  MINDLPTLFEVASGRKAVK--DKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITP

Query:  AKAENIKQYKCPNCSMKRGR
        AKAE+IKQYKCP+CS KR R
Subjt:  AKAENIKQYKCPNCSMKRGR

B8AMA8 PHD finger protein ALFIN-LIKE 31.8e-3862.83Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPT++E    RK V+D+  +DS  KS++STKR  +G ++ S  +++ E Y DD++EH +T CG+CGG YNA+EFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCS
        AE+IK YKCP+CS
Subjt:  AENIKQYKCPNCS

Q84TV4 PHD finger protein ALFIN-LIKE 31.8e-3862.83Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK
        MINDLPT++E    RK V+D+  +DS  KS++STKR  +G ++ S  +++ E Y DD++EH +T CG+CGG YNA+EFWIGCDICERWFHGKCVRITPAK
Subjt:  MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAK

Query:  AENIKQYKCPNCS
        AE+IK YKCP+CS
Subjt:  AENIKQYKCPNCS

Q9FFF5 PHD finger protein ALFIN-LIKE 14.1e-4671.43Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KR ++G  + S  KL++ESY D++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPNCSMKRGR
        KAE+IKQYKCP+C  K+GR
Subjt:  KAENIKQYKCPNCSMKRGR

Q9SRM4 PHD finger protein ALFIN-LIKE 21.6e-4570.25Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS DSGSKSRN TKR +DG  ++S  KL++ESY   ++EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPNCSMKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPNCSMKRGR

Arabidopsis top hitse value%identityAlignment
AT3G11200.1 alfin-like 21.1e-4670.25Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS DSGSKSRN TKR +DG  ++S  KL++ESY   ++EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPNCSMKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPNCSMKRGR

AT3G11200.2 alfin-like 21.1e-4670.25Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT
        +INDLPTLF+V +GRKA+KD KPS DSGSKSRN TKR +DG  ++S  KL++ESY   ++EDEHGDTLCGSCGG+Y  +EFWI CD+CERW+HGKCV+IT
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESY--GDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRIT

Query:  PAKAENIKQYKCPNCSMKRGR
        PAKAE+IKQYKCP C  K+GR
Subjt:  PAKAENIKQYKCPNCSMKRGR

AT3G42790.1 alfin-like 34.8e-3457.72Show/hide
Query:  MINDLPTLFEVASGRKAVKDKPSM--DSGSKSRNSTK-RLLDG-SIRNSNTKLLDESYG-DDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVR
        MIND+PT+FEV +G    KDK S    +G+KS++++K R  +G S +    K  DE    DDED+HG+TLCG+CG +  ADEFWI CD+CE+WFHGKCV+
Subjt:  MINDLPTLFEVASGRKAVKDKPSM--DSGSKSRNSTK-RLLDG-SIRNSNTKLLDESYG-DDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVR

Query:  ITPAKAENIKQYKCPNCSMKRGR
        ITPA+AE+IKQYKCP+CS KR R
Subjt:  ITPAKAENIKQYKCPNCSMKRGR

AT5G05610.1 alfin-like 12.9e-4771.43Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KR ++G  + S  KL++ESY D++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPNCSMKRGR
        KAE+IKQYKCP+C  K+GR
Subjt:  KAENIKQYKCPNCSMKRGR

AT5G05610.2 alfin-like 12.9e-4771.43Show/hide
Query:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA
        +INDLPTLFEV +GRK +KD KPSMD GSKSRN  KR ++G  + S  KL++ESY D++DEHGDTLCGSCGGNY  DEFWI CD+CERW+HGKCV+ITPA
Subjt:  MINDLPTLFEVASGRKAVKD-KPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPA

Query:  KAENIKQYKCPNCSMKRGR
        KAE+IKQYKCP+C  K+GR
Subjt:  KAENIKQYKCPNCSMKRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAATGATCTACCAACTCTATTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGTATGGATAGTGGAAGTAAATCCAGAAACAGCACTAAGAGGTT
ACTAGATGGGTCGATTAGAAACAGCAATACGAAGCTACTCGATGAGAGTTATGGAGATGACGAAGATGAGCATGGTGATACTCTCTGTGGGAGCTGCGGAGGGAACTACA
ATGCAGATGAGTTTTGGATTGGATGTGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGCGGATAACACCTGCTAAGGCAGAAAATATCAAGCAGTACAAATGCCCC
AATTGCAGCATGAAGAGAGGAAGACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAATGATCTACCAACTCTATTTGAAGTTGCGTCTGGAAGGAAAGCTGTTAAAGACAAACCCAGTATGGATAGTGGAAGTAAATCCAGAAACAGCACTAAGAGGTT
ACTAGATGGGTCGATTAGAAACAGCAATACGAAGCTACTCGATGAGAGTTATGGAGATGACGAAGATGAGCATGGTGATACTCTCTGTGGGAGCTGCGGAGGGAACTACA
ATGCAGATGAGTTTTGGATTGGATGTGACATCTGTGAGAGGTGGTTCCATGGAAAATGTGTGCGGATAACACCTGCTAAGGCAGAAAATATCAAGCAGTACAAATGCCCC
AATTGCAGCATGAAGAGAGGAAGACCGTAG
Protein sequenceShow/hide protein sequence
MINDLPTLFEVASGRKAVKDKPSMDSGSKSRNSTKRLLDGSIRNSNTKLLDESYGDDEDEHGDTLCGSCGGNYNADEFWIGCDICERWFHGKCVRITPAKAENIKQYKCP
NCSMKRGRP