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Lag0040919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:9786591..9787235
RNA-Seq ExpressionLag0040919
SyntenyLag0040919
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.7e-5552.58Show/hide
Query:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK
        E  L + RT  + QYLGLPSQ  +NK  VF+ + +++ + LQGWKEKLFS GGKEVLIK+VAQAIP Y+MSCFR P  +C++I+ + A FWWG +    K
Subjt:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK

Query:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA-----LSATWRSICWGRDLFKKGLDGALATG
         HW SW+++C +K+ GGLGF+ L  FNQAMLAKQ W++++N  S+L + LRG+YFK GNF+ A      S  WRSI WG++LF KG+   +  G
Subjt:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA-----LSATWRSICWGRDLFKKGLDGALATG

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]8.7e-5252.06Show/hide
Query:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK
        + IL +       QYLGLP+ + +N+   F+ +KD++ K LQGWK KLFS+GGKEVLIK+VAQAIP YTMSCFRLP  + R+   I A FWWG S +  K
Subjt:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK

Query:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG
         HW++W  +   K  GG+GFR L  FN+A+LAKQCWR++ +  S+L + L+GRYFKD +F+EA      S  WRSI WGRDL KKGL   +  G
Subjt:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.9e-5256.65Show/hide
Query:  IGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFR
        + K++  +FS + D++ K LQGWK KLFS+GGKEVLIK+VAQAIP YT+SCF+LP  IC ++ +I   FWWG S +  K HW SW+ +C  KD GG+GFR
Subjt:  IGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFR

Query:  QLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG
         +S FNQAMLAKQ WR++R+ +S+L KTLRG+YFK G+FL+A      S  WRSI WGRDLFKKG    +  G
Subjt:  QLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG

XP_023907370.1 uncharacterized protein LOC112019076 [Quercus suber]1.5e-5147Show/hide
Query:  QAKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGD
        + K   +  LG+      ++YLGLPS +G+NK A F+ +K+++ K +QGWKEKL S  G+EVLIK+V QAIPT+TMSCF+LP  +C +I+ +   FWWG 
Subjt:  QAKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGD

Query:  SGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEALSAT-----WRSICWGRDLFKKGLDGALATG
        +GDR K HW+ W  +C+ KD GGLGF+ L+ FN A+LAKQ WRL+ N  S+ Y+  + R+F D + LEA ++T     WRSI  GRD+  +G    + +G
Subjt:  SGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEALSAT-----WRSICWGRDLFKKGLDGALATG

XP_030477990.1 uncharacterized protein LOC115695032 [Cannabis sativa]8.7e-5248.44Show/hide
Query:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS
        +K+    ILG+      + YLGLP+   ++K  +F+++K++I K+L  W +K+FS+GGKEVL+K+V Q+IPTY MSCF+LP   C +I+ + +NFWWG +
Subjt:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS

Query:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGL
         D+ K HW  W+ +C++K  GGLGF+    FNQA+LAKQ WRL +N ES+LY+ L+GRYF   +FL A      S TW+ ICWGR+L KKG+
Subjt:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGL

TrEMBL top hitse value%identityAlignment
A0A2N9HYS7 Uncharacterized protein3.8e-5348.51Show/hide
Query:  TQAK-EDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWW
        TQAK E+ ++ILG+      ++YLGLPS IGK K   FS++K+++   ++GWKEKL S  G+E+LIK+V QAIPTYTM+CF+LP  +C++I+ I   FWW
Subjt:  TQAK-EDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWW

Query:  GDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEALSAT-----WRSICWGRDLFKKGLDGALA
        G +GD+ K HW+ WEK+C++K  GGLGFR L  FN A+LAKQ WRL+ N  S+LY+    ++F  GN +EA   T     WRSI   +DL + G+   + 
Subjt:  GDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEALSAT-----WRSICWGRDLFKKGLDGALA

Query:  TG
         G
Subjt:  TG

A0A6J1CV63 uncharacterized protein LOC1110146628.2e-5652.58Show/hide
Query:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK
        E  L + RT  + QYLGLPSQ  +NK  VF+ + +++ + LQGWKEKLFS GGKEVLIK+VAQAIP Y+MSCFR P  +C++I+ + A FWWG +    K
Subjt:  EQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTK

Query:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA-----LSATWRSICWGRDLFKKGLDGALATG
         HW SW+++C +K+ GGLGF+ L  FNQAMLAKQ W++++N  S+L + LRG+YFK GNF+ A      S  WRSI WG++LF KG+   +  G
Subjt:  CHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA-----LSATWRSICWGRDLFKKGLDGALATG

A0A6J1DRA0 uncharacterized protein LOC1110224231.9e-5256.65Show/hide
Query:  IGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFR
        + K++  +FS + D++ K LQGWK KLFS+GGKEVLIK+VAQAIP YT+SCF+LP  IC ++ +I   FWWG S +  K HW SW+ +C  KD GG+GFR
Subjt:  IGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFR

Query:  QLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG
         +S FNQAMLAKQ WR++R+ +S+L KTLRG+YFK G+FL+A      S  WRSI WGRDLFKKG    +  G
Subjt:  QLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATG

A0A803NM27 Uncharacterized protein8.5e-5347.12Show/hide
Query:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS
        +K+  + ILG+      + YLGLP+   ++K  +F+++K++I K+L  W +K+FS+GGKEVL+K+V Q+IPTY MSCF+LP   C +I+ + +NFWWG +
Subjt:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS

Query:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGL--------
         D+ K HW  W+ +C++K  GGLGFR    FNQA+LAKQ WRL +N ES+L++ L+GRYF   +FL A      S TW+  CWGR+L KKGL        
Subjt:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGL--------

Query:  DGALATGP
        D A AT P
Subjt:  DGALATGP

A0A803PKA4 Uncharacterized protein1.1e-5246.34Show/hide
Query:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS
        +K+  + IL +      + YLGLP+   ++K  +F+++K++I K+L  W +K+FS+GGKEVL+K+V Q+IPTY MSCF+LP   CR+++ + +NFWWG +
Subjt:  AKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDS

Query:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATGP
         D+ K HW  W+ +C++K  GGLGFR    FNQA+LAKQ WRL +N  S+LY+ L+GRYF   +FL A      S TW+ ICWGR+L KKG+   +A   
Subjt:  GDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEAL-----SATWRSICWGRDLFKKGLDGALATGP

Query:  NPNRE
         P +E
Subjt:  NPNRE

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.5e-2232.92Show/hide
Query:  FSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQA
        F ++ +++   + GW+EK  S  G+  L K+V  ++P ++MS   LP  I   +D++   F WG + ++ K H + W K+C  K  GGLG R   S N+A
Subjt:  FSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQA

Query:  MLAKQCWRLVRNHESILYKTLRGRY----FKDGNFL---EALSATWRSICWG-RDLFKKGL
        +++K  WRL++   S+    L+ +Y     +D  +L    + S+TWRSI  G RD+   G+
Subjt:  MLAKQCWRLVRNHESILYKTLRGRY----FKDGNFL---EALSATWRSICWG-RDLFKKGL

P93295 Uncharacterized mitochondrial protein AtMg003101.0e-2640.91Show/hide
Query:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK-DNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLE
        A+P Y MSCFRL   +C+ +      FWW    ++ K  W++W+K+C++K D+GGLGFR L  FNQA+LAKQ +R++    ++L + LR RYF   + +E
Subjt:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK-DNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLE

Query:  ALSAT-----WRSICWGRDLFKKGLDGALATG
            T     WRSI  GR+L  +GL   +  G
Subjt:  ALSAT-----WRSICWGRDLFKKGLDGALATG

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.2e-1631.21Show/hide
Query:  QYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK
        +YLGLP    K   + +  L +KI   +  W  +  S  G+  LI SV  ++  + MS FRLP+   ++ID IC++F W      TK   ++W  +C  K
Subjt:  QYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK

Query:  DNGGLGFRQLSSFNQ---------AMLAKQCWRLVRNHESI
        D GGLG R L   N+           L    W+ +  H ++
Subjt:  DNGGLGFRQLSSFNQ---------AMLAKQCWRLVRNHESI

AT4G29090.1 Ribonuclease H-like superfamily protein3.7e-2435.11Show/hide
Query:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA
        A+PTYTM+CF LP  +C+ I  + A+FWW +  +    HW +W+ +   K  GG+GF+ + +FN A+L KQ WR++   ES++ K  + RYF   + L A
Subjt:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEA

Query:  -----LSATWRSICWGRDLFKKGLDGALATG
              S  W+SI   +++ ++G    +  G
Subjt:  -----LSATWRSICWGRDLFKKGLDGALATG

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.1e-2840.91Show/hide
Query:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK-DNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLE
        A+P Y MSCFRL   +C+ +      FWW    ++ K  W++W+K+C++K D+GGLGFR L  FNQA+LAKQ +R++    ++L + LR RYF   + +E
Subjt:  AIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKCHWMSWEKMCRNK-DNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLE

Query:  ALSAT-----WRSICWGRDLFKKGLDGALATG
            T     WRSI  GR+L  +GL   +  G
Subjt:  ALSAT-----WRSICWGRDLFKKGLDGALATG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCCAAGCTAAGGAGGACTGCGAGCAAATCCTTGGGATAAAGAGAACATACTCTCTAGACCAATATTTGGGGTTACCTTCCCAAATAGGGAAAAACAAAGGAGC
AGTTTTCTCTAAATTGAAAGATAAAATTGAAAAAATTCTCCAAGGATGGAAGGAAAAACTTTTTTCTCTTGGGGGTAAAGAAGTGCTCATCAAATCGGTGGCACAAGCGA
TCCCCACTTACACCATGAGTTGTTTTCGCCTTCCTAACTACATTTGTCGTGACATTGACAGGATTTGTGCTAACTTCTGGTGGGGAGACTCGGGAGATCGAACCAAATGC
CACTGGATGAGTTGGGAGAAGATGTGTAGAAACAAAGACAATGGAGGATTGGGATTTAGACAGCTTTCCTCTTTCAACCAAGCCATGCTCGCTAAGCAATGTTGGAGACT
TGTGAGAAACCATGAAAGTATCCTCTATAAGACCCTAAGAGGCCGCTATTTCAAGGACGGGAACTTCCTGGAAGCCCTGTCGGCAACTTGGAGAAGCATTTGTTGGGGTC
GTGACCTATTCAAAAAGGGATTAGATGGCGCATTGGCAACGGGTCCGAATCCTAATAGAGAAAGACCCTTGGATCAAGAGAGACGGCAATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACACCCAAGCTAAGGAGGACTGCGAGCAAATCCTTGGGATAAAGAGAACATACTCTCTAGACCAATATTTGGGGTTACCTTCCCAAATAGGGAAAAACAAAGGAGC
AGTTTTCTCTAAATTGAAAGATAAAATTGAAAAAATTCTCCAAGGATGGAAGGAAAAACTTTTTTCTCTTGGGGGTAAAGAAGTGCTCATCAAATCGGTGGCACAAGCGA
TCCCCACTTACACCATGAGTTGTTTTCGCCTTCCTAACTACATTTGTCGTGACATTGACAGGATTTGTGCTAACTTCTGGTGGGGAGACTCGGGAGATCGAACCAAATGC
CACTGGATGAGTTGGGAGAAGATGTGTAGAAACAAAGACAATGGAGGATTGGGATTTAGACAGCTTTCCTCTTTCAACCAAGCCATGCTCGCTAAGCAATGTTGGAGACT
TGTGAGAAACCATGAAAGTATCCTCTATAAGACCCTAAGAGGCCGCTATTTCAAGGACGGGAACTTCCTGGAAGCCCTGTCGGCAACTTGGAGAAGCATTTGTTGGGGTC
GTGACCTATTCAAAAAGGGATTAGATGGCGCATTGGCAACGGGTCCGAATCCTAATAGAGAAAGACCCTTGGATCAAGAGAGACGGCAATCGTAG
Protein sequenceShow/hide protein sequence
MNTQAKEDCEQILGIKRTYSLDQYLGLPSQIGKNKGAVFSKLKDKIEKILQGWKEKLFSLGGKEVLIKSVAQAIPTYTMSCFRLPNYICRDIDRICANFWWGDSGDRTKC
HWMSWEKMCRNKDNGGLGFRQLSSFNQAMLAKQCWRLVRNHESILYKTLRGRYFKDGNFLEALSATWRSICWGRDLFKKGLDGALATGPNPNRERPLDQERRQS