; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040937 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040937
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:10030706..10031743
RNA-Seq ExpressionLag0040937
SyntenyLag0040937
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5462052.1 hypothetical protein F2P56_018092 [Juglans regia]3.5e-3439.15Show/hide
Query:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL
        M ++WN EG +  K  GRN FL EF+N   + R+  G PW++D+ LI I+E +G   +    F    FW+ +HDLP     ++   ++G S G+   VD+
Subjt:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL

Query:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC----EPGNSSEEESL-YGEWLRATP
        +E+G      LR+ V ID+S+PL RG ++ +G     +W+   YERLP FCY CG V H Q +C      G++  E  L YG WLRA P
Subjt:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC----EPGNSSEEESL-YGEWLRATP

TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]1.6e-3435.71Show/hide
Query:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE
        +IWN+ G+V ++  G NTF+  F N   + ++   GPW + K+LIV+E+ +G   I+   F   +FW+ IHD+P++C  ++    +   IGE  ++  E 
Subjt:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE

Query:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSE-----EESLYGEWLRATPILGGPPKQSSQKI
            G+  +R+ V++DI++PLKR L +++G   E T V + YERLP+FC+ CG +GH  +EC   ++       +++ +G W+RATPI     K  S  +
Subjt:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSE-----EESLYGEWLRATPILGGPPKQSSQKI

Query:  FRGSSWGRGR
          GSS  RGR
Subjt:  FRGSSWGRGR

TXG51202.1 hypothetical protein EZV62_023726 [Acer yangbiense]1.7e-3337.61Show/hide
Query:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE
        ++W+  GRV I+    N FL +FNN  E+ RI + GPW +DK+LIV+ + +G   IS   F  V  W+ IHD+P++C  R+ A  +   IG   D+  E 
Subjt:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE

Query:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEE-----ESLYGEWLRA------TPILGGPPK
            G+  L++ V+IDI++PLKR L +R+        V + YERLPEFCY CG +GH  ++CE   +  E      + +G W+RA       P +  P +
Subjt:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEE-----ESLYGEWLRA------TPILGGPPK

Query:  QSS--QKIFRGSSWGRGR
         SS  Q+ F G S G+G+
Subjt:  QSS--QKIFRGSSWGRGR

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.8e-3638.03Show/hide
Query:  IWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEE
        IW  +  V ++  G N F   F N  +++RI +GGPW +DK L+V+ EA G+ +++   FRYV FWI +H+LP+ C  R+  + +G  +G+ K++D  E 
Subjt:  IWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEE

Query:  GGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEEES----LYGEWLRA---TPILGGPPKQSSQK
        G      +RI V ID+  PLKRGL V +G   +   V I YERLP FCY CG +GH+ ++C P N+ E  S     +G W+RA   T   G   K++S +
Subjt:  GGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEEES----LYGEWLRA---TPILGGPPKQSSQK

Query:  IFRGSSWGRGRGRRATFQNYR----DDWNPGRSN
           GS  G   G   T +N R      WN G+ +
Subjt:  IFRGSSWGRGRGRRATFQNYR----DDWNPGRSN

TXG54113.1 hypothetical protein EZV62_019369 [Acer yangbiense]1.7e-3334.65Show/hide
Query:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL
        M  IW     V I+    N F+  F N+ +++RI  GGPW++D+A+IV EE  G   I   +F    FWI IH+LP++C      I +G  IGE +D+DL
Subjt:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL

Query:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC-EPGN----SSEEESLYGEWLRATPILGGPPKQSSQ
        E         +R+ V I + +PL R L V +    + T + + YERL +FC+ C  +GH  +EC EPG+    SSE       WLRA      PPK++  
Subjt:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC-EPGN----SSEEESLYGEWLRATPILGGPPKQSSQ

Query:  KIFRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKDPELEGGKAGSEGSNK
        +   G+   R   R+  F ++    N  R   E W+ KD  +E G +G     K
Subjt:  KIFRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKDPELEGGKAGSEGSNK

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein7.5e-3535.71Show/hide
Query:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE
        +IWN+ G+V ++  G NTF+  F N   + ++   GPW + K+LIV+E+ +G   I+   F   +FW+ IHD+P++C  ++    +   IGE  ++  E 
Subjt:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE

Query:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSE-----EESLYGEWLRATPILGGPPKQSSQKI
            G+  +R+ V++DI++PLKR L +++G   E T V + YERLP+FC+ CG +GH  +EC   ++       +++ +G W+RATPI     K  S  +
Subjt:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSE-----EESLYGEWLRATPILGGPPKQSSQKI

Query:  FRGSSWGRGR
          GSS  RGR
Subjt:  FRGSSWGRGR

A0A5C7H466 CCHC-type domain-containing protein8.3e-3437.61Show/hide
Query:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE
        ++W+  GRV I+    N FL +FNN  E+ RI + GPW +DK+LIV+ + +G   IS   F  V  W+ IHD+P++C  R+ A  +   IG   D+  E 
Subjt:  KIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEE

Query:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEE-----ESLYGEWLRA------TPILGGPPK
            G+  L++ V+IDI++PLKR L +R+        V + YERLPEFCY CG +GH  ++CE   +  E      + +G W+RA       P +  P +
Subjt:  EGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEE-----ESLYGEWLRA------TPILGGPPK

Query:  QSS--QKIFRGSSWGRGR
         SS  Q+ F G S G+G+
Subjt:  QSS--QKIFRGSSWGRGR

A0A5C7H9Y2 CCHC-type domain-containing protein1.4e-3638.03Show/hide
Query:  IWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEE
        IW  +  V ++  G N F   F N  +++RI +GGPW +DK L+V+ EA G+ +++   FRYV FWI +H+LP+ C  R+  + +G  +G+ K++D  E 
Subjt:  IWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEE

Query:  GGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEEES----LYGEWLRA---TPILGGPPKQSSQK
        G      +RI V ID+  PLKRGL V +G   +   V I YERLP FCY CG +GH+ ++C P N+ E  S     +G W+RA   T   G   K++S +
Subjt:  GGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEEES----LYGEWLRA---TPILGGPPKQSSQK

Query:  IFRGSSWGRGRGRRATFQNYR----DDWNPGRSN
           GS  G   G   T +N R      WN G+ +
Subjt:  IFRGSSWGRGRGRRATFQNYR----DDWNPGRSN

A0A5C7HA63 Uncharacterized protein8.3e-3434.65Show/hide
Query:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL
        M  IW     V I+    N F+  F N+ +++RI  GGPW++D+A+IV EE  G   I   +F    FWI IH+LP++C      I +G  IGE +D+DL
Subjt:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL

Query:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC-EPGN----SSEEESLYGEWLRATPILGGPPKQSSQ
        E         +R+ V I + +PL R L V +    + T + + YERL +FC+ C  +GH  +EC EPG+    SSE       WLRA      PPK++  
Subjt:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQEC-EPGN----SSEEESLYGEWLRATPILGGPPKQSSQ

Query:  KIFRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKDPELEGGKAGSEGSNK
        +   G+   R   R+  F ++    N  R   E W+ KD  +E G +G     K
Subjt:  KIFRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKDPELEGGKAGSEGSNK

A0A6J1D765 uncharacterized protein LOC1110179021.4e-3330Show/hide
Query:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL
        M  +W      R +P G N ++  F ++ EK R+   GPW ++K+L+V+      ++    +F +  FWI IH++P  C   + A  +G  +G+ ++++ 
Subjt:  MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDL

Query:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGN---SSEEESLYGEWLRATPILGGPPKQSSQKI
        +   G     +R+ VKID+S+PL+RG+ ++  S  ++ W  + YE+LP+FCY CG +GH  +ECE  +   ++     YG+WLRAT +         +  
Subjt:  EEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGN---SSEEESLYGEWLRATPILGGPPKQSSQKI

Query:  FRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKD--------PELEGGKAGSEGSNK
        +RG  +GRG              N GR  R  W+R+D        PE    +A  EG ++
Subjt:  FRGSSWGRGRGRRATFQNYRDDWNPGRSNRESWKRKD--------PELEGGKAGSEGSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding2.8e-0524.43Show/hide
Query:  IKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEEGGSGENTLRILVKIDISQPLKRGLMVRIGS
        I + GPW+++  + VI+  +     S   F+ + FWI I  +P+    R    +I  SIGE                             + GL +    
Subjt:  IKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEEGGSGENTLRILVKIDISQPLKRGLMVRIGS

Query:  KAEETWVKISYERLPEFCYGCGTVGHIQQEC
          + + +K  YE+L  FC  CG + H   EC
Subjt:  KAEETWVKISYERLPEFCYGCGTVGHIQQEC

AT5G36228.1 nucleic acid binding;zinc ion binding8.3e-1025.98Show/hide
Query:  PWNYDKALIVIEEAQGASRISTTSF-RYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEE
        PW +++  I ++  +      T  F  +++ W+HI  +P+     +    I +++GE   +D  EE  S    +R+ V++D ++PL+    VR  S+ E 
Subjt:  PWNYDKALIVIEEAQGASRISTTSF-RYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEEGGSGENTLRILVKIDISQPLKRGLMVRIGSKAEE

Query:  TWVKISYERLPEFCYGCGTVGHIQQEC
          +   YE+L   C  C  V H    C
Subjt:  TWVKISYERLPEFCYGCGTVGHIQQEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAAATCTGGAACAAGGAAGGAAGAGTGAGAATAAAACCGAAGGGCAGAAACACCTTTTTGTGTGAATTTAACAATGTTCATGAAAAGGAAAGAATAAAAAAAGG
AGGGCCTTGGAATTATGACAAAGCCCTCATAGTGATTGAAGAAGCACAAGGAGCAAGTAGGATTTCAACGACATCCTTCAGGTATGTGAATTTCTGGATACATATACATG
ACTTACCTATGGTCTGTCATCGCAGGAAATGGGCAATTCAGATTGGAAACTCCATTGGAGAATTTAAAGATGTGGACCTTGAGGAAGAAGGAGGCAGTGGGGAGAACACT
CTAAGAATTCTGGTTAAAATCGATATCTCCCAACCTTTGAAGAGAGGACTAATGGTTAGAATAGGGTCAAAAGCAGAGGAAACTTGGGTCAAGATCTCTTATGAACGTCT
GCCAGAATTCTGTTATGGATGCGGTACAGTAGGGCATATTCAACAAGAGTGTGAACCAGGCAATTCCAGTGAGGAAGAAAGTCTATATGGAGAATGGCTGAGAGCCACCC
CAATCCTCGGAGGACCGCCAAAGCAATCATCCCAAAAAATTTTCAGGGGCAGTTCTTGGGGAAGGGGAAGAGGACGAAGAGCGACATTCCAAAATTACAGGGACGATTGG
AATCCGGGAAGAAGCAATAGAGAAAGCTGGAAAAGGAAAGACCCAGAGCTCGAAGGTGGAAAAGCAGGATCAGAAGGAAGCAATAAGGAAAACTCCGGCAACGATAGGGA
CTCTCCGGCGAGAAACACCGGGAACAGAACCAGCGAAGCCCCAACGGCTAGTAGGAGGGCAGAGATAGTAATTGTGTCAGAGGATAAAGGACCGAACAGTGACCCAATCA
AAGGAAAAGAAAGGAGTCAGAGGCAAATAGGCAGGACAGTGACTCATTCACAGAAAAAGGACAAAAAACGAGAAAGGAGCACAGAAAGGCAGCAGGAATTATTATTAAGG
ACGCCAGTGACAGAAAGGACACGTCTGAGGAAAAAATGGATGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAAATCTGGAACAAGGAAGGAAGAGTGAGAATAAAACCGAAGGGCAGAAACACCTTTTTGTGTGAATTTAACAATGTTCATGAAAAGGAAAGAATAAAAAAAGG
AGGGCCTTGGAATTATGACAAAGCCCTCATAGTGATTGAAGAAGCACAAGGAGCAAGTAGGATTTCAACGACATCCTTCAGGTATGTGAATTTCTGGATACATATACATG
ACTTACCTATGGTCTGTCATCGCAGGAAATGGGCAATTCAGATTGGAAACTCCATTGGAGAATTTAAAGATGTGGACCTTGAGGAAGAAGGAGGCAGTGGGGAGAACACT
CTAAGAATTCTGGTTAAAATCGATATCTCCCAACCTTTGAAGAGAGGACTAATGGTTAGAATAGGGTCAAAAGCAGAGGAAACTTGGGTCAAGATCTCTTATGAACGTCT
GCCAGAATTCTGTTATGGATGCGGTACAGTAGGGCATATTCAACAAGAGTGTGAACCAGGCAATTCCAGTGAGGAAGAAAGTCTATATGGAGAATGGCTGAGAGCCACCC
CAATCCTCGGAGGACCGCCAAAGCAATCATCCCAAAAAATTTTCAGGGGCAGTTCTTGGGGAAGGGGAAGAGGACGAAGAGCGACATTCCAAAATTACAGGGACGATTGG
AATCCGGGAAGAAGCAATAGAGAAAGCTGGAAAAGGAAAGACCCAGAGCTCGAAGGTGGAAAAGCAGGATCAGAAGGAAGCAATAAGGAAAACTCCGGCAACGATAGGGA
CTCTCCGGCGAGAAACACCGGGAACAGAACCAGCGAAGCCCCAACGGCTAGTAGGAGGGCAGAGATAGTAATTGTGTCAGAGGATAAAGGACCGAACAGTGACCCAATCA
AAGGAAAAGAAAGGAGTCAGAGGCAAATAGGCAGGACAGTGACTCATTCACAGAAAAAGGACAAAAAACGAGAAAGGAGCACAGAAAGGCAGCAGGAATTATTATTAAGG
ACGCCAGTGACAGAAAGGACACGTCTGAGGAAAAAATGGATGCCTTAA
Protein sequenceShow/hide protein sequence
MPKIWNKEGRVRIKPKGRNTFLCEFNNVHEKERIKKGGPWNYDKALIVIEEAQGASRISTTSFRYVNFWIHIHDLPMVCHRRKWAIQIGNSIGEFKDVDLEEEGGSGENT
LRILVKIDISQPLKRGLMVRIGSKAEETWVKISYERLPEFCYGCGTVGHIQQECEPGNSSEEESLYGEWLRATPILGGPPKQSSQKIFRGSSWGRGRGRRATFQNYRDDW
NPGRSNRESWKRKDPELEGGKAGSEGSNKENSGNDRDSPARNTGNRTSEAPTASRRAEIVIVSEDKGPNSDPIKGKERSQRQIGRTVTHSQKKDKKRERSTERQQELLLR
TPVTERTRLRKKWMP