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Lag0040952 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040952
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionchaperone protein dnaJ 50
Genome locationchr13:10157168..10163261
RNA-Seq ExpressionLag0040952
SyntenyLag0040952
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019167881.1 PREDICTED: uncharacterized protein LOC109163586 [Ipomoea nil]1.6e-0628.33Show/hide
Query:  GLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTLAGTWFQHVQRTKN
        G G+VL+NH+G  I A C  ++G       E+   K  L  I+  A   V++E DCL     F+    +F++V  +  + + ++  +      H++R+ N
Subjt:  GLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTLAGTWFQHVQRTKN

Query:  LVADQLAQRAMIDDGFNATW
         VA +LA RA +    +  W
Subjt:  LVADQLAQRAMIDDGFNATW

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.2e-0630.71Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N  A      +T G+GW+L++  G+VI+A C+ +     +  LE+ A   GL AIR+     + +E D L  I+L     ++ T +  +  E+ Q+   +
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAMIDD
             +H+ R  N VA  LA+RAM +D
Subjt:  AGTWFQHVQRTKNLVADQLAQRAMIDD

XP_023879491.1 uncharacterized protein LOC111991905 [Quercus suber]3.5e-0628.67Show/hide
Query:  LKLEDDSLWVLGKELMNQNLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEEN
        ++L   S + L + +++ N +A    ++ + G+G V ++H G +I A  + +  +  + + E  A +  +L  +EL++ RVI+E DC  VI+   G+   
Subjt:  LKLEDDSLWVLGKELMNQNLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEEN

Query:  FTFVRTVALEVQQLSSTLAGTWFQHVQRTKNLVADQLAQRAMI
         T    V  E + L   L G  FQH QR +N +   LA+ A++
Subjt:  FTFVRTVALEVQQLSSTLAGTWFQHVQRTKNLVADQLAQRAMI

XP_024033533.1 uncharacterized protein LOC112095662 [Citrus clementina]2.7e-0631.58Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N++A +   +   GLG V++N  G V+ A  K +     V ++E +A + GL    + +   VIVE DC  V NL +    N T +     E+Q      
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAMIDDGFNATW
            FQHV R  N  A  LA+RA+   G    W
Subjt:  AGTWFQHVQRTKNLVADQLAQRAMIDDGFNATW

XP_030495191.1 uncharacterized protein LOC115710980 [Cannabis sativa]1.6e-0632.26Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N++A L+   +  G+G V++N DG V+ A  KP++G     ++E QA    L  + +L +P  IVE D L V N F       +    + L+V  L S  
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAM
              H +R+ N+VA  LA+ A+
Subjt:  AGTWFQHVQRTKNLVADQLAQRAM

TrEMBL top hitse value%identityAlignment
A0A5D3BK40 Chaperone protein dnaJ 506.5e-0682.86Show/hide
Query:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK
        +AI+MVKKTP Y NRL ALEL+RSGGATNKKKGHK
Subjt:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK

A0A6J1CP26 uncharacterized protein LOC1110134125.9e-0730.71Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N  A      +T G+GW+L++  G+VI+A C+ +     +  LE+ A   GL AIR+     + +E D L  I+L     ++ T +  +  E+ Q+   +
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAMIDD
             +H+ R  N VA  LA+RAM +D
Subjt:  AGTWFQHVQRTKNLVADQLAQRAMIDD

A0A6J1DSV1 uncharacterized protein LOC1110236085.0e-0631.11Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIR-ELAMP-------RVIVELDCLAVINLFDGAEENFTFVRTVALE
        N +A      +T G+GW+L++  G+VI+ADC+ +     +  LE+ A   GL AIR E   P        + +E D L  I+L     ++ T +  +  E
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIR-ELAMP-------RVIVELDCLAVINLFDGAEENFTFVRTVALE

Query:  VQQLSSTLAGTWFQHVQRTKNLVADQLAQRAMIDD
        + Q+   +     +H+ R  N VA  LA+RAM +D
Subjt:  VQQLSSTLAGTWFQHVQRTKNLVADQLAQRAMIDD

A0A803P614 Uncharacterized protein7.7e-0732.26Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N++A L+   +  G+G V++N DG V+ A  KP++G     ++E QA    L  + +L +P  IVE D L V N F       +    + L+V  L S  
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAM
              H +R+ N+VA  LA+ A+
Subjt:  AGTWFQHVQRTKNLVADQLAQRAM

E0CVK8 J domain-containing protein2.2e-0677.14Show/hide
Query:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK
        +A++MVKKTP Y NRLWALEL+R+GGATNKKK HK
Subjt:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK

SwissProt top hitse value%identityAlignment
Q2QUP1 DnaJ protein ERDJ71.1e-0568.57Show/hide
Query:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK
        KAIE VK+TP Y NRL ALE +R+GG ++KKKGHK
Subjt:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK

Q8GUN6 Chaperone protein dnaJ 502.0e-0462.86Show/hide
Query:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK
        +AI  VK+TP Y N+L ALEL+R+GG +NKKKG K
Subjt:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK

Arabidopsis top hitse value%identityAlignment
AT1G61770.1 Chaperone DnaJ-domain superfamily protein1.4e-0562.86Show/hide
Query:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK
        +AI  VK+TP Y N+L ALEL+R+GG +NKKKG K
Subjt:  KAIEMVKKTPTYTNRLWALELKRSGGATNKKKGHK

AT4G29090.1 Ribonuclease H-like superfamily protein3.2e-0524.19Show/hide
Query:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL
        N +A     N   G+GWVL+N  G+V     + +  L  V+  E++A +  +L++       VI E D   +I + +  +E +  ++    ++Q+L S  
Subjt:  NLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQATKPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTL

Query:  AGTWFQHVQRTKNLVADQLAQRAM
            F  + R  N +A+++A+ ++
Subjt:  AGTWFQHVQRTKNLVADQLAQRAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTGTTCTTTATCGTGGGTGGTTGTTTCAACCGTGCGTGGTGAACGTTGAGGTCATGGTTGTTTTAGCAGCTGGTTGTCCAAAACCACCCATTCATATTACCCA
TGCTAGAAGGGGTTGGAGAAAGACCACTGATGGTTATTTGAGGAAGGATGGAAATAACTTTTTTGCATTTCTTGGTCAGAAAGTAGCCCTTGGTTTTCCTAGATCACCTT
ATGCCATAAACTTTAAGGCTATTGAGATGGTCAAGAAAACTCCTACTTACACAAATAGATTATGGGCTCTTGAACTTAAACGAAGTGGAGGAGCAACAAACAAAAAGAAA
GGTCACAAGTATCAATACTATTTGCTTAATTGTACTGGATATGTGAGCATGCACCGTGCTCTTGGATTGGTTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCGTCA
GGATGTTCAATCTTGTAAACTGCTTAAGCTAGAGGACGACTCCCTTTGGGTTTTAGGCAAGGAATTAATGAATCAAAACTTGGAAGCATTCTTAGAGATGAGAAACTCTA
CTGAGGGACTGGGTTGGGTGCTGAAAAACCATGATGGAGATGTTATCAGAGCTGATTGCAAACCTGTTATGGGTCTTCTCAAGGTGGTGGTGTTGGAGATGCAAGCAACC
AAACCTGGACTATTGGCTATTCGCGAGTTGGCGATGCCTCGGGTGATTGTGGAGTTGGATTGTTTGGCAGTAATAAACTTATTCGATGGAGCTGAAGAGAACTTCACCTT
TGTTCGTACAGTAGCTCTAGAGGTTCAACAGCTCTCCTCTACATTGGCGGGGACATGGTTTCAGCATGTTCAGAGGACCAAAAATCTGGTTGCTGATCAGCTGGCACAAC
GAGCAATGATAGACGATGGGTTTAACGCTACTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTGTTCTTTATCGTGGGTGGTTGTTTCAACCGTGCGTGGTGAACGTTGAGGTCATGGTTGTTTTAGCAGCTGGTTGTCCAAAACCACCCATTCATATTACCCA
TGCTAGAAGGGGTTGGAGAAAGACCACTGATGGTTATTTGAGGAAGGATGGAAATAACTTTTTTGCATTTCTTGGTCAGAAAGTAGCCCTTGGTTTTCCTAGATCACCTT
ATGCCATAAACTTTAAGGCTATTGAGATGGTCAAGAAAACTCCTACTTACACAAATAGATTATGGGCTCTTGAACTTAAACGAAGTGGAGGAGCAACAAACAAAAAGAAA
GGTCACAAGTATCAATACTATTTGCTTAATTGTACTGGATATGTGAGCATGCACCGTGCTCTTGGATTGGTTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCGTCA
GGATGTTCAATCTTGTAAACTGCTTAAGCTAGAGGACGACTCCCTTTGGGTTTTAGGCAAGGAATTAATGAATCAAAACTTGGAAGCATTCTTAGAGATGAGAAACTCTA
CTGAGGGACTGGGTTGGGTGCTGAAAAACCATGATGGAGATGTTATCAGAGCTGATTGCAAACCTGTTATGGGTCTTCTCAAGGTGGTGGTGTTGGAGATGCAAGCAACC
AAACCTGGACTATTGGCTATTCGCGAGTTGGCGATGCCTCGGGTGATTGTGGAGTTGGATTGTTTGGCAGTAATAAACTTATTCGATGGAGCTGAAGAGAACTTCACCTT
TGTTCGTACAGTAGCTCTAGAGGTTCAACAGCTCTCCTCTACATTGGCGGGGACATGGTTTCAGCATGTTCAGAGGACCAAAAATCTGGTTGCTGATCAGCTGGCACAAC
GAGCAATGATAGACGATGGGTTTAACGCTACTTGGTTTTGA
Protein sequenceShow/hide protein sequence
MVVVLYRGWLFQPCVVNVEVMVVLAAGCPKPPIHITHARRGWRKTTDGYLRKDGNNFFAFLGQKVALGFPRSPYAINFKAIEMVKKTPTYTNRLWALELKRSGGATNKKK
GHKYQYYLLNCTGYVSMHRALGLVRFKAQRYKDATRQDVQSCKLLKLEDDSLWVLGKELMNQNLEAFLEMRNSTEGLGWVLKNHDGDVIRADCKPVMGLLKVVVLEMQAT
KPGLLAIRELAMPRVIVELDCLAVINLFDGAEENFTFVRTVALEVQQLSSTLAGTWFQHVQRTKNLVADQLAQRAMIDDGFNATWF