CuGenDBv2

Gene ID	Lag0040958
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	embryo defective 3006
Genome location	chr13:10218373..10222843
RNA-Seq Expression	Lag0040958
Synteny	Lag0040958
Gene Ontology terms	GO:0007059 - chromosome segregation (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-54

68.31

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLL-VGLILDNVEQLLEEQ
        M+KK EIGTPVSSS IDLKKSF+LAVRSLLTSCSREEFRECFSRFT AEQEYLHRLFIQVITSLHGNIEDEFESLCVETQ   + VGL+LDNVEQLLEEQ
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLL-VGLILDNVEQLLEEQ

Query:  DLDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT
        DLDPLYSKK                 +++  D+ K            +   +KGVQDAS M DAVEKLRNRC AYA D V+RT
Subjt:  DLDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT

XP_022136388.1 uncharacterized protein LOC111008110 [Momordica charantia]

1.7e-52

66.3

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        MEKK E+ TP SSSH+DLKKSF+LAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ETQ    VG ILDNVEQLLEEQ 
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD
        LDPLYSKK                 ++   D+ K            +   +KGVQD SG ADAVEKL NRC AYATD VN TCD
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

8.9e-54

68.68

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M+KK EIGTPVSSS IDLKKSF+LAVRSLLTSCSREEFRECFSRFT AEQEYLHRLFIQVITSLHGNIEDEFESLCVETQ    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT
        LDPLYSKK                 +++  D+ K            +   +KGVQDAS M DAVEKLRNRC AYA D V+RT
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT

XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]

1.7e-52

67.58

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M+KK EIGTPVSSS IDLKKSF+LAVRSLLTSCSR EFRECFSRFT AEQEYLHRLFIQVITSLHGNIEDEFESLCVET+    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT
        LDPLYSKK                 +++  D+ K            +   +KGVQDAS M DAVEKLRNRC AYA D V+RT
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT

XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]

4.4e-53

67.39

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        MEKKREI TPVSSS IDLKKSF+LAVRSLLTSCSREEFRECFS+FT+AEQEYLHRLFIQVITSLHGNIEDEFESLCVETQ    VGL+LDNVEQLLEEQ+
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD
        LDPLYSKK                 +++  D+ K            +   +KGVQDAS MADAV+KLR RC AY TD VN T D
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BTB0 uncharacterized protein LOC103493030

9.0e-52

64.86

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M KK EI TPV+S  IDLKKSF+LAVRSLLTSCSREEFRECFSRFT AEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQ    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM
        LDPLYSKK                 +++  D+ K            +   +KGVQDASGMADAV+KLR+ C +Y TD VN T D+
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM

A0A5A7TAS4 Uncharacterized protein

9.0e-52

64.86

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M KK EI TPV+S  IDLKKSF+LAVRSLLTSCSREEFRECFSRFT AEQ+YLHRLFIQVITSLHGNIEDEFESLCVETQ    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM
        LDPLYSKK                 +++  D+ K            +   +KGVQDASGMADAV+KLR+ C +Y TD VN T D+
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM

A0A6J1C7G2 uncharacterized protein LOC111008110

8.1e-53

66.3

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        MEKK E+ TP SSSH+DLKKSF+LAVRSLLTSCSREEFRECF RFT AEQEYLHRLFIQVITSLHGNIEDEFESLC+ETQ    VG ILDNVEQLLEEQ 
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD
        LDPLYSKK                 ++   D+ K            +   +KGVQD SG ADAVEKL NRC AYATD VN TCD
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCD

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

4.3e-54

68.68

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M+KK EIGTPVSSS IDLKKSF+LAVRSLLTSCSREEFRECFSRFT AEQEYLHRLFIQVITSLHGNIEDEFESLCVETQ    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT
        LDPLYSKK                 +++  D+ K            +   +KGVQDAS M DAVEKLRNRC AYA D V+RT
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

8.1e-53

67.58

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        M+KK EIGTPVSSS IDLKKSF+LAVRSLLTSCSR EFRECFSRFT AEQEYLHRLFIQVITSLHGNIEDEFESLCVET+    VGL+LDNVEQLLEEQD
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT
        LDPLYSKK                 +++  D+ K            +   +KGVQDAS M DAVEKLRNRC AYA D V+RT
Subjt:  LDPLYSKK-----------------LRNRTDIFKP-----------VSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

3.1e-20

36.94

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Query:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD
        MEK         S    LKKSF+  +R LLT+CS+++F + FS+F+ AEQE L +L+ +V+ +LH  IE+EF+  C ETQ    VG ILD VE+L+EEQ 
Subjt:  MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQD

Query:  LDPLYSKKLRNRTDIFKPVSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM
        LDPL+S K       +   +  +  +Q  + +    E+   +  A  + +  +T D+
Subjt:  LDPLYSKKLRNRTDIFKPVSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM

Sequences

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CDS sequence

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ATGGAGAAGAAGCGCGAGATTGGTACTCCGGTGAGCTCAAGCCACATCGATCTGAAAAAGTCGTTCAGGCTCGCTGTTCGTTCTCTCCTCACTTCATGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGATTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGACGAGTTTGAGT
CATTATGTGTTGAAACACAGGTAATGCTCCTGGTAGGACTTATACTTGATAACGTTGAACAACTTTTGGAAGAGCAGGATCTAGACCCATTGTATTCTAAGAAGCTGAGG
AACAGAACCGACATATTCAAGCCCGTATCATGTCCTCAGAAAGGAGTGCAAGATGCCTCGGGCATGGCAGATGCTGTTGAGAAGCTAAGAAACAGATGCAGTGCTTATGC
AACTGATGTCGTCAATAGGACCTGCGATATGTAA

mRNA sequence

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Protein sequence

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MEKKREIGTPVSSSHIDLKKSFRLAVRSLLTSCSREEFRECFSRFTIAEQEYLHRLFIQVITSLHGNIEDEFESLCVETQVMLLVGLILDNVEQLLEEQDLDPLYSKKLR
NRTDIFKPVSCPQKGVQDASGMADAVEKLRNRCSAYATDVVNRTCDM

Lag0040958 (gene) of Sponge gourd (AG-4) v1 genome