; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0040980 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0040980
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationchr13:10498540..10512632
RNA-Seq ExpressionLag0040980
SyntenyLag0040980
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026974.1 Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-12173.05Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTW-SLPSLPVYILF---------------------------------------CVFL-------
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVT T  SLPSLPVY LF                                       C+FL       
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTW-SLPSLPVYILF---------------------------------------CVFL-------

Query:  ---------------------YRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDHHARESSKRTSDYES
                               GGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG+RHGRDYHHRKR+RDDD HA ESSKRTSD+ES
Subjt:  ---------------------YRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDHHARESSKRTSDYES

Query:  RRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        RRN +HESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]4.1e-11985.71Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        +RHGRDYHHRKRYRDDD HA ESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]4.1e-11986.09Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HRHGRDYHHRKRYRDDD HA ESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]5.4e-11986.09Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIR DFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HRHGRDYH+RKRYRDDD HA ESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]7.0e-11986.79Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF GTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        HRHGRDYHHRKRYRDDD HA ESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 21.5e-11986.47Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV    Y T           ILF      GGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        +RHGRDYHHRKRYRDDD HA ESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 22.0e-11986.09Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HRHGRDYHHRKRYRDDD HA ESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1CIF4 Nuclear cap-binding protein subunit 23.8e-11885.66Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF+LYYSRED EDAVK++SGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIRVDFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGS+ PV+PQYGKHGG HGHG
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        HRHGRDY HRKRYRDDDHHA ESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1FX36 Nuclear cap-binding protein subunit 23.8e-11885.34Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIR DFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGS+  V+PQYGKHGGSHG+G
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
         RHGRDYH+RKRYRDDD HA ESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 22.6e-11986.09Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG
        DDRPIR DFDWGFQDGRQWGRGRSGGQV        T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHG

Query:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HRHGRDYH+RKRYRDDD HA ESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 21.1e-4256.41Show/hide
Query:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E+ L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF+ YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV                          RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 21.5e-4265.25Show/hide
Query:  LSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E+ L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCF+ YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQV
         GF +GRQ+GRG+SGGQV
Subjt:  WGFQDGRQWGRGRSGGQV

Q84L14 Nuclear cap-binding protein subunit 22.7e-8166.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCFILYYSRED EDAVK+ISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGH
        DDRPIRVDFDWGF++GRQWGRGRSGGQV        T   P             RGGYGK+VQKELEAQR+LVDYG    G+ QP   PQY +     G+
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGH

Query:  G--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        G  +R+ RDY  RKRYR+D+     SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+R
Subjt:  G--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 21.1e-4256.41Show/hide
Query:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E+ L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF+ YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV                          RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 22.8e-9468.63Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQ      V   +     P          RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG+
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS

Query:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        +G G  +RHGR  +HRKR RDDD + R++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-0829.41Show/hide
Query:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E+ L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   ++Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-0829.41Show/hide
Query:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E+ L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   ++Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-0836.25Show/hide
Query:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVD
        A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF FI + S +D   A+K + G I+D R I V+
Subjt:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 202.0e-9568.63Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQ      V   +     P          RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG+
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS

Query:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        +G G  +RHGR  +HRKR RDDD + R++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 202.0e-9568.63Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQ      V   +     P          RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG+
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGS

Query:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        +G G  +RHGR  +HRKR RDDD + R++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  HGHG--HRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTACGCAGACATTCGAGGGAACATTCAGAAGCTCGAAGAGGTTGTGTCAACATTCCAAGTCGGTCGGTTCTCAAGGTTCTCGACACCCCGATGGAACTGACCGA
CCGACATGTCGACACCGACCGAGAAGCAGCTCAGTGCCGCCGTCTTTCTACCGCTTGTGCCGCCGCCGCCGTCGTCTTTCTTCCGTTCGTGTCACCGCAGCCTCATTCGA
TTTTCTACTCCCTTGCTGTTACTGCATTGGAGAAGAAGCGCACGAGTAGAATTGGGCGACTGAGCTCATCCAACGAGTTCTCTAGTTGCAAGGCAAAATCCAATCTAAAA
CTTACTTGCTACTTTGATTTGAAGTGCCTCGAATCGCCGTTCCTCTATGAGTTTTTTGGTCGTAGTGCAGATTTTGTTATTCTAGGGTTCATGGCTTCATTGTTCAAGGA
CCCATCAAAGCTATCTGTATATCGGGATAGAAGATTCCAGGGAACACAAGATGAATTTGAACAGGCACTACAGACTTCAACCACTGTTTACGTGGGAAATATGTCCTTTT
ACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGTTTTTGTTTTATC
CTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGTAG
GCAATGGGGCCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTGACTTGGAGTCTACCATCACTTCCTGTTTATATTTTATTTTGCGTCTTTCTAT
ACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATGCCTCAGTAT
GGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGTAGAGATTACCACCACCGCAAACGTTACCGAGATGATGATCACCATGCCCGTGAAAGCTCTAAGAGAAC
TTCAGATTATGAGTCTAGAAGAAACCCCGATCACGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGATGATGATCGAAAGC
AGCGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTACGCAGACATTCGAGGGAACATTCAGAAGCTCGAAGAGGTTGTGTCAACATTCCAAGTCGGTCGGTTCTCAAGGTTCTCGACACCCCGATGGAACTGACCGA
CCGACATGTCGACACCGACCGAGAAGCAGCTCAGTGCCGCCGTCTTTCTACCGCTTGTGCCGCCGCCGCCGTCGTCTTTCTTCCGTTCGTGTCACCGCAGCCTCATTCGA
TTTTCTACTCCCTTGCTGTTACTGCATTGGAGAAGAAGCGCACGAGTAGAATTGGGCGACTGAGCTCATCCAACGAGTTCTCTAGTTGCAAGGCAAAATCCAATCTAAAA
CTTACTTGCTACTTTGATTTGAAGTGCCTCGAATCGCCGTTCCTCTATGAGTTTTTTGGTCGTAGTGCAGATTTTGTTATTCTAGGGTTCATGGCTTCATTGTTCAAGGA
CCCATCAAAGCTATCTGTATATCGGGATAGAAGATTCCAGGGAACACAAGATGAATTTGAACAGGCACTACAGACTTCAACCACTGTTTACGTGGGAAATATGTCCTTTT
ACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGTTTTTGTTTTATC
CTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGTAG
GCAATGGGGCCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTGACTTGGAGTCTACCATCACTTCCTGTTTATATTTTATTTTGCGTCTTTCTAT
ACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATGCCTCAGTAT
GGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGTAGAGATTACCACCACCGCAAACGTTACCGAGATGATGATCACCATGCCCGTGAAAGCTCTAAGAGAAC
TTCAGATTATGAGTCTAGAAGAAACCCCGATCACGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGATGATGATCGAAAGC
AGCGACATTGA
Protein sequenceShow/hide protein sequence
MYLRRHSREHSEARRGCVNIPSRSVLKVLDTPMELTDRHVDTDREAAQCRRLSTACAAAAVVFLPFVSPQPHSIFYSLAVTALEKKRTSRIGRLSSSNEFSSCKAKSNLK
LTCYFDLKCLESPFLYEFFGRSADFVILGFMASLFKDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFI
LYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQY
GKHGGSHGHGHRHGRDYHHRKRYRDDDHHARESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH