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Lag0041019 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041019
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:10919876..10920502
RNA-Seq ExpressionLag0041019
SyntenyLag0041019
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF0931873.1 hypothetical protein E2562_007070 [Oryza meyeriana var. granulata]4.1e-1436.32Show/hide
Query:  LLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVED-GADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSV-GVESHGNEEYGEWMRAGM
        L+G K+GK  EV    D    G   R++  L + RPL RG  VED   ++E WC   YE LL FCY CGCLGH  +EC S  GV+S  +++YGEW+R   
Subjt:  LLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVED-GADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSV-GVESHGNEEYGEWMRAGM

Query:  VFGETGRRELEGNMRATEGQSREGTVQG--PKEQGSEGRVESVEKET---------EGDVVDPEKGTQLAGQSGSTSTAALADGGADSR------DSEGR
             G++   G  R+   +   G V G    +Q SEGR    EKE          + D  DPE             T    DGG   R      D EG 
Subjt:  VFGETGRRELEGNMRATEGQSREGTVQG--PKEQGSEGRVESVEKET---------EGDVVDPEKGTQLAGQSGSTSTAALADGGADSR------DSEGR

Query:  N
        N
Subjt:  N

KAF3952870.1 hypothetical protein CMV_021626 [Castanea mollissima]4.1e-1433.97Show/hide
Query:  LGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNEEYGEWMRAGMVFG
        +G K+G+V EV             R+R+ + ID+PLRRG  V++     YW    YERL  FCY CG LGH  + C    +E +   +YGEW++AG VF 
Subjt:  LGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNEEYGEWMRAGMVFG

Query:  ETGRRELEGNMRATEGQSREGTVQGPKEQGSEGRV-ESVEKETEGDVVDPEKGTQL
          G +E        E +S    ++G +     G V ES+      D    E GT++
Subjt:  ETGRRELEGNMRATEGQSREGTVQGPKEQGSEGRV-ESVEKETEGDVVDPEKGTQL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.2e-1946.15Show/hide
Query:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRREC--GSVGVESHGNEEYGEWMR
        MA +LG KLG VEE+ G     WAG   R+R+ + + +PLRRG K+++   K+ WC + YE+L DFCY CG +GHS REC   S  V ++  E+YG+W+R
Subjt:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRREC--GSVGVESHGNEEYGEWMR

Query:  AGMV
        A ++
Subjt:  AGMV

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.7e-1550.63Show/hide
Query:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRE
        MA+ LG +LG+VEEV G    +W      +R+ + + +PLRRG KV+    K+ WC + YERL DFCYGCGC+GHS RE
Subjt:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRE

XP_042942846.1 uncharacterized protein LOC122277028 [Carya illinoinensis]4.5e-1334.57Show/hide
Query:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNEE----YGEW
        + +L+G+ LGKV EV    D    G   R+R+ L I +PL R  ++  G  +EYW    YERL DFCY CG LGHS +EC S  + S   +E    YG+W
Subjt:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNEE----YGEW

Query:  MRAGMVFGETGRRELEGNMRATEGQ----SREGTVQGPKEQGSEGRVE-SVEKETEGDVVDP
        +RA    G        G   +  G+    S E    G  +   + R E S  +E   ++++P
Subjt:  MRAGMVFGETGRRELEGNMRATEGQ----SREGTVQGPKEQGSEGRVE-SVEKETEGDVVDP

TrEMBL top hitse value%identityAlignment
A0A2N9G219 RNase H domain-containing protein2.4e-1235.14Show/hide
Query:  MSRQIRAMAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNE--
        + R+  A A+ +G  +G V+ V  + D     +  R+R+ L ++RPL RG  V     K+ W    YERL +FCY CGCL H  ++C  +G++ H +   
Subjt:  MSRQIRAMAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNE--

Query:  ---EYGEWMRA
           +YG W+RA
Subjt:  ---EYGEWMRA

A0A2N9H0J9 Uncharacterized protein3.2e-1237.96Show/hide
Query:  RQIRAMAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECG----SVGVESHGNE
        R     A ++G+ LG+VE V G  D     +  R+R+ L +  PL RG  +   A K+ W    YERL +FCY CGCL H+ ++C     S   ES    
Subjt:  RQIRAMAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECG----SVGVESHGNE

Query:  EYGEWMRA
        +YG W+RA
Subjt:  EYGEWMRA

A0A6G1F4T1 CCHC-type domain-containing protein2.0e-1436.32Show/hide
Query:  LLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVED-GADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSV-GVESHGNEEYGEWMRAGM
        L+G K+GK  EV    D    G   R++  L + RPL RG  VED   ++E WC   YE LL FCY CGCLGH  +EC S  GV+S  +++YGEW+R   
Subjt:  LLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVED-GADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSV-GVESHGNEEYGEWMRAGM

Query:  VFGETGRRELEGNMRATEGQSREGTVQG--PKEQGSEGRVESVEKET---------EGDVVDPEKGTQLAGQSGSTSTAALADGGADSR------DSEGR
             G++   G  R+   +   G V G    +Q SEGR    EKE          + D  DPE             T    DGG   R      D EG 
Subjt:  VFGETGRRELEGNMRATEGQSREGTVQG--PKEQGSEGRVESVEKET---------EGDVVDPEKGTQLAGQSGSTSTAALADGGADSR------DSEGR

Query:  N
        N
Subjt:  N

A0A6J1D765 uncharacterized protein LOC1110179021.6e-1946.15Show/hide
Query:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRREC--GSVGVESHGNEEYGEWMR
        MA +LG KLG VEE+ G     WAG   R+R+ + + +PLRRG K+++   K+ WC + YE+L DFCY CG +GHS REC   S  V ++  E+YG+W+R
Subjt:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRREC--GSVGVESHGNEEYGEWMR

Query:  AGMV
        A ++
Subjt:  AGMV

A0A6J1DVS4 uncharacterized protein LOC1110235558.0e-1650.63Show/hide
Query:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRE
        MA+ LG +LG+VEEV G    +W      +R+ + + +PLRRG KV+    K+ WC + YERL DFCYGCGC+GHS RE
Subjt:  MAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGGCAGATAAGAGCGATGGCTCAGTTGTTGGGTGAGAAACTCGGGAAGGTGGAAGAGGTGGGTGGTACAATGGATAGTGAGTGGGCGGGATCAGTTTTCCGTTT
GAGGATTGGCTTAAGAATTGATCGGCCGTTACGCAGAGGATTTAAGGTTGAGGATGGGGCGGATAAAGAGTACTGGTGTCTAGTTCTCTACGAACGACTTCTGGATTTCT
GTTATGGATGCGGTTGCCTAGGACACTCGAGGAGGGAATGTGGTTCAGTGGGGGTGGAGTCCCATGGGAACGAGGAGTATGGTGAGTGGATGAGGGCGGGGATGGTTTTT
GGGGAGACTGGACGAAGGGAGTTGGAGGGGAACATGAGAGCTACTGAGGGGCAGAGTCGGGAAGGTACGGTTCAGGGGCCAAAAGAGCAAGGGAGTGAGGGGCGAGTTGA
GAGTGTGGAGAAGGAAACGGAGGGGGATGTGGTGGATCCAGAGAAGGGTACGCAGCTTGCTGGCCAGAGTGGCTCGACGTCTACTGCCGCTCTGGCAGATGGGGGTGCGG
ATAGTAGGGATAGCGAAGGAAGGAATGAGGGAGATTTGAAAGGGAAAAAGAAAGTGGGGAGTGTTGAGGCTAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGGCAGATAAGAGCGATGGCTCAGTTGTTGGGTGAGAAACTCGGGAAGGTGGAAGAGGTGGGTGGTACAATGGATAGTGAGTGGGCGGGATCAGTTTTCCGTTT
GAGGATTGGCTTAAGAATTGATCGGCCGTTACGCAGAGGATTTAAGGTTGAGGATGGGGCGGATAAAGAGTACTGGTGTCTAGTTCTCTACGAACGACTTCTGGATTTCT
GTTATGGATGCGGTTGCCTAGGACACTCGAGGAGGGAATGTGGTTCAGTGGGGGTGGAGTCCCATGGGAACGAGGAGTATGGTGAGTGGATGAGGGCGGGGATGGTTTTT
GGGGAGACTGGACGAAGGGAGTTGGAGGGGAACATGAGAGCTACTGAGGGGCAGAGTCGGGAAGGTACGGTTCAGGGGCCAAAAGAGCAAGGGAGTGAGGGGCGAGTTGA
GAGTGTGGAGAAGGAAACGGAGGGGGATGTGGTGGATCCAGAGAAGGGTACGCAGCTTGCTGGCCAGAGTGGCTCGACGTCTACTGCCGCTCTGGCAGATGGGGGTGCGG
ATAGTAGGGATAGCGAAGGAAGGAATGAGGGAGATTTGAAAGGGAAAAAGAAAGTGGGGAGTGTTGAGGCTAGGTAG
Protein sequenceShow/hide protein sequence
MSRQIRAMAQLLGEKLGKVEEVGGTMDSEWAGSVFRLRIGLRIDRPLRRGFKVEDGADKEYWCLVLYERLLDFCYGCGCLGHSRRECGSVGVESHGNEEYGEWMRAGMVF
GETGRRELEGNMRATEGQSREGTVQGPKEQGSEGRVESVEKETEGDVVDPEKGTQLAGQSGSTSTAALADGGADSRDSEGRNEGDLKGKKKVGSVEAR