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Lag0041020 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041020
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:10920603..10920926
RNA-Seq ExpressionLag0041020
SyntenyLag0041020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54000.1 hypothetical protein EZV62_019256 [Acer yangbiense]5.2e-0531.73Show/hide
Query:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVPGLLTGL
        DLV   + +++   + + +  +E      V   D  +VGRVLS K+VN DAF+S++   WH      IE  G+     SF +K+ R   W        GL
Subjt:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVPGLLTGL

Query:  WSLG
        W  G
Subjt:  WSLG

TXG73888.1 hypothetical protein EZV62_002467 [Acer yangbiense]6.8e-0531.91Show/hide
Query:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVP
        +L   W+ +++  E++E  + +E      V   D C+VG+VLS KRVN +AF+SV+   W       IE  G       F + E R + W + P
Subjt:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVP

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-0432Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MD++ + W+    T +E E +  +   P L+  +  LCVV ++ ++KR++ +A RSVM+  W  +  TR E  G+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.2e-0640Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MDD+   W+  TL  EE + I  +   P L+V +  LC VG++  +KR+  +AF SVM+  W  +  TRIE AG+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]1.0e-0537.33Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MD++   W+   LT EE E    +   P L+  +  LC VG++ ++KR++  A  SVM+  W  +  TRIEAAG+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

TrEMBL top hitse value%identityAlignment
A0A5C7HAI4 Uncharacterized protein2.5e-0531.73Show/hide
Query:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVPGLLTGL
        DLV   + +++   + + +  +E      V   D  +VGRVLS K+VN DAF+S++   WH      IE  G+     SF +K+ R   W        GL
Subjt:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVPGLLTGL

Query:  WSLG
        W  G
Subjt:  WSLG

A0A5C7IXM0 CCHC-type domain-containing protein3.3e-0531.91Show/hide
Query:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVP
        +L   W+ +++  E++E  + +E      V   D C+VG+VLS KRVN +AF+SV+   W       IE  G       F + E R + W + P
Subjt:  DLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVP

A0A6J1D765 uncharacterized protein LOC1110179025.6e-0532Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MD++ + W+    T +E E +  +   P L+  +  LCVV ++ ++KR++ +A RSVM+  W  +  TR E  G+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

A0A6J1DVS4 uncharacterized protein LOC1110235556.0e-0740Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MDD+   W+  TL  EE + I  +   P L+V +  LC VG++  +KR+  +AF SVM+  W  +  TRIE AG+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

A0A6J1DYG3 uncharacterized protein LOC1110246765.1e-0637.33Show/hide
Query:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI
        MD++   W+   LT EE E    +   P L+  +  LC VG++ ++KR++  A  SVM+  W  +  TRIEAAG+
Subjt:  MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATTTAGTGAACCGGTGGAAGAAGATGACATTGACAGGGGAGGAGGCGGAGGCGATACGACCAAATGAAGCGGCGCCGCCTCTTTCGGTCAGTTCGAGG
GACTTGTGTGTAGTGGGTCGGGTGTTGTCGACTAAGAGGGTGAATCCAGATGCTTTCCGTTCAGTGATGAGAGGGGCCTGGCATGCGAATGTGGGGACAAGAATT
GAAGCGGCAGGGATAATGTGTTCGTGGTGCAGTTTCGATCACAAGGAGAGAAGGCGAGAGTGTTGGCCACAGGTCCCTGGGCTTTTGACCGGTCTCTGGTCCCTG
GGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGATTTAGTGAACCGGTGGAAGAAGATGACATTGACAGGGGAGGAGGCGGAGGCGATACGACCAAATGAAGCGGCGCCGCCTCTTTCGGTCAGTTCGAGG
GACTTGTGTGTAGTGGGTCGGGTGTTGTCGACTAAGAGGGTGAATCCAGATGCTTTCCGTTCAGTGATGAGAGGGGCCTGGCATGCGAATGTGGGGACAAGAATT
GAAGCGGCAGGGATAATGTGTTCGTGGTGCAGTTTCGATCACAAGGAGAGAAGGCGAGAGTGTTGGCCACAGGTCCCTGGGCTTTTGACCGGTCTCTGGTCCCTG
GGCTTTTGA
Protein sequenceShow/hide protein sequence
MDDLVNRWKKMTLTGEEAEAIRPNEAAPPLSVSSRDLCVVGRVLSTKRVNPDAFRSVMRGAWHANVGTRIEAAGIMCSWCSFDHKERRRECWPQVPGLLTGLWSL
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