; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041059 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041059
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:11418040..11418426
RNA-Seq ExpressionLag0041059
SyntenyLag0041059
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599936.1 hypothetical protein SDJN03_05169, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3778.81Show/hide
Query:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA
        PSAVVFPKF   S ISPPWLRRQ  AAA RCVS    GSSVAELEREL+ EGEEWLK+GRLEEKCG G  G+VELLE LEREAIM EDEGR+ TDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA

Query:  KIFSTSSRVFQALKQQSE
        KIFSTSSRVFQALKQ S+
Subjt:  KIFSTSSRVFQALKQQSE

KAG7030615.1 hypothetical protein SDJN02_04652, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-3877.97Show/hide
Query:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA
        PSAVVFPKF   S +SPPWLRRQ  AAA RCVS    GSSV ELEREL+ EGEEWLK+GRLEEKCG G  G+VELLE LEREAIMGEDEGR+ TDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA

Query:  KIFSTSSRVFQALKQQSE
        KIFSTSSRVFQALKQ S+
Subjt:  KIFSTSSRVFQALKQQSE

XP_022941969.1 uncharacterized protein LOC111447176 [Cucurbita moschata]3.9e-3979.66Show/hide
Query:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA
        PSAVVFPKF   S +SPPWLRRQ  AAA RCVSQ   GSSVAELEREL+ EGEEWLK+GRLEEKCG G  G+VELLE LEREAIMGEDEGR+ TDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA

Query:  KIFSTSSRVFQALKQQSE
        KIFSTSSRVFQALKQ S+
Subjt:  KIFSTSSRVFQALKQQSE

XP_022988679.1 uncharacterized protein LOC111485933 [Cucurbita maxima]8.9e-3670.37Show/hide
Query:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA
        VSASL+ PPP        S VVFPK    SAISPPW  R+ AAAA RCVSQ   G SVAE       E EEWLK+GRL+EKCGGG  GVVELLECLEREA
Subjt:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA

Query:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGRE TDYNRRAKIFSTSS VFQALKQ S+
Subjt:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE

XP_023541783.1 uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]2.8e-3776.27Show/hide
Query:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA
        PSAVVFPKF   S +SPPWLRRQ   AA RCVSQ   GSSVAELERE + EGEEWLK+GRLEEKCG G  G+VELLE LEREAIMGEDEGR+ T+Y+RRA
Subjt:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA

Query:  KIFSTSSRVFQALKQQSE
        KIFSTSSRVFQALK+ S+
Subjt:  KIFSTSSRVFQALKQQSE

TrEMBL top hitse value%identityAlignment
A0A5D3DSR0 Uncharacterized protein5.4e-3162.96Show/hide
Query:  MQVSASLLTPP----PSAVVFPKF---SAISPPWLRRQTAAAAA--RCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA
        MQ+SASL+ PP    PS   FPK     A+S PWL  + A A    RCVSQ   G+SVAE++       EEWLK+GRLEEKCG G  G+VELLECLE+EA
Subjt:  MQVSASLLTPP----PSAVVFPKF---SAISPPWLRRQTAAAAA--RCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA

Query:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGRE TDYNRRAKIFSTSS VFQALKQ  +
Subjt:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE

A0A6J1D0H7 uncharacterized protein LOC1110159266.9e-3469.12Show/hide
Query:  MQVSA--SLLTPP------PSAVVFPKFSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAI
        M+VS+   L  PP      PSAV F   SAISP W RR T   A+RCVSQ   GS  AELERE+AAEGEEWLK+GRL+EKCGGGK GVVELLECLE EAI
Subjt:  MQVSA--SLLTPP------PSAVVFPKFSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAI

Query:  MGEDEGREATDYNRRAKIFSTSSRVFQALKQQSEQG
        MGEDEGR+  DY+RRAKIFSTSS+VFQALKQQ+  G
Subjt:  MGEDEGREATDYNRRAKIFSTSSRVFQALKQQSEQG

A0A6J1FPZ7 uncharacterized protein LOC1114471761.9e-3979.66Show/hide
Query:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA
        PSAVVFPKF   S +SPPWLRRQ  AAA RCVSQ   GSSVAELEREL+ EGEEWLK+GRLEEKCG G  G+VELLE LEREAIMGEDEGR+ TDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRA

Query:  KIFSTSSRVFQALKQQSE
        KIFSTSSRVFQALKQ S+
Subjt:  KIFSTSSRVFQALKQQSE

A0A6J1FW01 uncharacterized protein LOC1114478171.3e-3571.11Show/hide
Query:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA
        VSASL+TPPP        S VVF K    SAISP WL R+ AAAA RCVSQ   G SVAE       E EEWLK+GRLEEKCGGG  GVVELLECLEREA
Subjt:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA

Query:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGRE TDYNRRAKIFSTSS VFQALKQ S+
Subjt:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE

A0A6J1JM89 uncharacterized protein LOC1114859334.3e-3670.37Show/hide
Query:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA
        VSASL+ PPP        S VVFPK    SAISPPW  R+ AAAA RCVSQ   G SVAE       E EEWLK+GRL+EKCGGG  GVVELLECLEREA
Subjt:  VSASLLTPPP--------SAVVFPK---FSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREA

Query:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGRE TDYNRRAKIFSTSS VFQALKQ S+
Subjt:  IMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein2.7e-1448.51Show/hide
Query:  LRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGG-KLGVVELLECLEREAIMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE
        ++++   AAARCV+    GS  A     +  E EE L   R    CGG    GV ELLECLE+EAIMG D+GR+  DYNRRAKIF  SS++F+ L +Q +
Subjt:  LRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGG-KLGVVELLECLEREAIMGEDEGREATDYNRRAKIFSTSSRVFQALKQQSE

Query:  Q
        Q
Subjt:  Q


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCTCTGCATCTCTTCTAACCCCGCCACCCTCCGCCGTTGTCTTCCCGAAATTCTCCGCCATTTCCCCACCATGGCTCCGCCGTCAGACTGCGGCGGCAGCGGC
AAGATGTGTTAGTCAGAGCAGCCGGGGGAGCTCTGTGGCGGAGCTGGAGAGGGAGCTGGCGGCGGAGGGAGAAGAGTGGCTGAAGGTAGGGAGGCTGGAGGAGAAGTGCG
GCGGCGGAAAGCTGGGAGTGGTGGAGCTGCTGGAATGTCTGGAAAGAGAAGCCATCATGGGAGAAGATGAAGGAAGAGAGGCCACTGATTACAACAGGAGGGCCAAGATT
TTCAGTACAAGTTCCAGAGTTTTTCAAGCTCTCAAGCAACAATCTGAACAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCTCTGCATCTCTTCTAACCCCGCCACCCTCCGCCGTTGTCTTCCCGAAATTCTCCGCCATTTCCCCACCATGGCTCCGCCGTCAGACTGCGGCGGCAGCGGC
AAGATGTGTTAGTCAGAGCAGCCGGGGGAGCTCTGTGGCGGAGCTGGAGAGGGAGCTGGCGGCGGAGGGAGAAGAGTGGCTGAAGGTAGGGAGGCTGGAGGAGAAGTGCG
GCGGCGGAAAGCTGGGAGTGGTGGAGCTGCTGGAATGTCTGGAAAGAGAAGCCATCATGGGAGAAGATGAAGGAAGAGAGGCCACTGATTACAACAGGAGGGCCAAGATT
TTCAGTACAAGTTCCAGAGTTTTTCAAGCTCTCAAGCAACAATCTGAACAAGGATAA
Protein sequenceShow/hide protein sequence
MQVSASLLTPPPSAVVFPKFSAISPPWLRRQTAAAAARCVSQSSRGSSVAELERELAAEGEEWLKVGRLEEKCGGGKLGVVELLECLEREAIMGEDEGREATDYNRRAKI
FSTSSRVFQALKQQSEQG