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Lag0041064 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041064
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:11473919..11474335
RNA-Seq ExpressionLag0041064
SyntenyLag0041064
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]8.5e-0836Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKS---LMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI
        +NS A+W +   +GG+SWV+ DS GS IC   K++R+KW ++ L+  A+ EGLK+   + E    +  P+       E+  ILN+   +L EL+N+ + I
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKS---LMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]4.2e-0734.44Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTEL
        +N+NA W  +T  GGI W++RD  G +I    + IR + +I  L+ +AI EGL+++   ++E+  P+ +ESD+ E +++L+ + ++ TE+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTEL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]5.1e-0534.57Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN
        +N++A W  +T   GI W++RD  G +I  G + IR + +I  L+ +AI EGL+++   ++E+  P+ +ESD+ E +++L+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]8.5e-0835.05Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI
        +N++A+W D+T RGGI W++R  DG ++  G + +    +++ L+A AI EGL++L         PL IE+D+ E+ ++LN + E+LT+   +   I
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.6e-0631.58Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLME-----FKKENRLPLEIESDAFEIVNILNDRAENLTEL
        +N++A W  +T  GGI W++RD  G +I    + IR + +I  L+ +AI EGL+++ +      ++E+  P+ +ESD+ E +++L+ + ++ TE+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLME-----FKKENRLPLEIESDAFEIVNILNDRAENLTEL

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.0e-0734.44Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTEL
        +N+NA W  +T  GGI W++RD  G +I    + IR + +I  L+ +AI EGL+++   ++E+  P+ +ESD+ E +++L+ + ++ TE+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTEL

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.5e-0534.57Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN
        +N++A W  +T   GI W++RD  G +I  G + IR + +I  L+ +AI EGL+++   ++E+  P+ +ESD+ E +++L+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN

A0A6J1DNV9 uncharacterized protein LOC1110224034.1e-0835.05Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI
        +N++A+W D+T RGGI W++R  DG ++  G + +    +++ L+A AI EGL++L         PL IE+D+ E+ ++LN + E+LT+   +   I
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAI

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.5e-0534.57Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN
        +N++A W  +T   GI W++RD  G +I  G + IR + +I  L+ +AI EGL+++   ++E+  P+ +ESD+ E +++L+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILN

A0A6J1DSV1 uncharacterized protein LOC1110236081.7e-0631.58Show/hide
Query:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLME-----FKKENRLPLEIESDAFEIVNILNDRAENLTEL
        +N++A W  +T  GGI W++RD  G +I    + IR + +I  L+ +AI EGL+++ +      ++E+  P+ +ESD+ E +++L+ + ++ TE+
Subjt:  MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLME-----FKKENRLPLEIESDAFEIVNILNDRAENLTEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCGAACGCAACTTGGATTGACAACACAGCTCGTGGAGGAATTTCGTGGGTAGTTCGAGACTCTGATGGATCCCTGATCTGCTTCGGAATGAAACAAATTAGACA
AAAATGGGACATTCAAGCGTTGAAAGCTTTAGCAATTTGGGAGGGGCTCAAAAGTCTTATGGAATTCAAGAAGGAGAACAGGTTACCTCTCGAAATAGAATCGGATGCTT
TTGAGATCGTAAATATCTTGAACGATCGAGCAGAAAATCTTACAGAGCTAAATAACATCACCAATGCGATTCGCTCTCCGTGTTCGAATTGGAAGCCAAAAATTTTGTCA
CCCACAATGTTGCTCGCAAAATCACTAAGCGTTCTTTTGTTTCGTTTTAAGAGGATTCCCAATCTCAAGAAGATGGGTGCATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCGAACGCAACTTGGATTGACAACACAGCTCGTGGAGGAATTTCGTGGGTAGTTCGAGACTCTGATGGATCCCTGATCTGCTTCGGAATGAAACAAATTAGACA
AAAATGGGACATTCAAGCGTTGAAAGCTTTAGCAATTTGGGAGGGGCTCAAAAGTCTTATGGAATTCAAGAAGGAGAACAGGTTACCTCTCGAAATAGAATCGGATGCTT
TTGAGATCGTAAATATCTTGAACGATCGAGCAGAAAATCTTACAGAGCTAAATAACATCACCAATGCGATTCGCTCTCCGTGTTCGAATTGGAAGCCAAAAATTTTGTCA
CCCACAATGTTGCTCGCAAAATCACTAAGCGTTCTTTTGTTTCGTTTTAAGAGGATTCCCAATCTCAAGAAGATGGGTGCATTGTAA
Protein sequenceShow/hide protein sequence
MNSNATWIDNTARGGISWVVRDSDGSLICFGMKQIRQKWDIQALKALAIWEGLKSLMEFKKENRLPLEIESDAFEIVNILNDRAENLTELNNITNAIRSPCSNWKPKILS
PTMLLAKSLSVLLFRFKRIPNLKKMGAL