; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041101 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041101
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr13:12021310..12022357
RNA-Seq ExpressionLag0041101
SyntenyLag0041101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]8.3e-2941.78Show/hide
Query:  KQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQ----------DRKKDKRPRTDDSGRGR
        +++  +SL DY+TRFN E LQVEG  +  +L+A    + DE L  S   + +R  +   E  +R QR+ S  +           R   KR R+ D  +G 
Subjt:  KQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQ----------DRKKDKRPRTDDSGRGR

Query:  ADHDHGRG-RAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPRA--E
              R  +  P  KFEKYT T VP +QVLMEI+N  LLK+  RM +S+ +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE V EP+A   
Subjt:  ADHDHGRG-RAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPRA--E

Query:  AEPDQRWSRQRRT
         E D+  +R+ RT
Subjt:  AEPDQRWSRQRRT

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.7e-3543.86Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR
        G R   +P   LLT+KQ+  +SLRDY+ RFN+E LQVEG  +  +L+A  + + DE L  S   + +R      E  +R QR+ S           D  R
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR

Query:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN
           KR R+ D  +G R +      +  P  KFEKYTPT VP +QVLMEI++  LLK+  RMK+S+ +R K +YCLFHRDHGH+T++C  LK+E+E LI+ 
Subjt:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN

Query:  GYLKESVGEPRA--EAEPDQRWSRQRRT
        GYLKE V EP+A    E D+  +R+ RT
Subjt:  GYLKESVGEPRA--EAEPDQRWSRQRRT

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.7e-2939.91Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR
        G R   +P   LLT+KQ+  +SL DY+ RFN E LQ+E   +  +L+A  + + DE L  S   + ++  +   E  +R QR+ S           D  R
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR

Query:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN
           KR R+ D  +G R +      +  P  KFEKYTPT VP +QVLMEI++  LLK+  RMK  + +R K +YCLFHRDH H+T++   LK+E+E LI+ 
Subjt:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN

Query:  GYLKESVGEPRA--EAEPDQRWSRQRRT
        GYL+E V EP+A    E ++  +R+ RT
Subjt:  GYLKESVGEPRA--EAEPDQRWSRQRRT

XP_023876176.1 uncharacterized protein LOC111988620 [Quercus suber]3.0e-2333.94Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEI-----KEVRTRTQRHSSVDQDRKKDK-
        G    +K    L+++KQ+  ++LR YITRFN EAL ++  ++   + A T  L   + L S+   + + + E+     K +       +  D+ RK+++ 
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEI-----KEVRTRTQRHSSVDQDRKKDK-

Query:  --RPRTDDSGRGRADHDHGRGRAH-PFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGY
          R R   S R R D      R+  P G+F  +TP   P  QVLM+I++ G L F G++KS   +R + +YC FHRDHGH T  C  LK +IEALI+ G 
Subjt:  --RPRTDDSGRGRADHDHGRGRAH-PFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGY

Query:  LKESVGEPRAEAEPDQRWSRQ
        L++ V + R +  P +   R+
Subjt:  LKESVGEPRAEAEPDQRWSRQ

XP_030924856.1 uncharacterized protein LOC115951865 [Quercus lobata]7.3e-2533.63Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEI--KEVRTRTQRHSSVDQDRKKDKRPRT
        G    ++    L+++KQ+  ++LR YITRFN E L +   ++   + + T+RL  ++ L S+   + + +T +  +  +      + + ++ K  KR R 
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEI--KEVRTRTQRHSSVDQDRKKDKRPRT

Query:  DDS--GRGRA------DHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNG
        +D+   RGR         D  R R  P G+F  +TP   P  QVLM+I+N G L FLG++K   ++R + +YC FHRDHGH T NC  LK +IEALI  G
Subjt:  DDS--GRGRA------DHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNG

Query:  YLKESVGEPRAEAEPDQRWSRQRRTP
         L+  V   R +   +Q   R+   P
Subjt:  YLKESVGEPRAEAEPDQRWSRQRRTP

TrEMBL top hitse value%identityAlignment
A0A2N9F1B5 Ribonuclease H1.5e-2334.26Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQDRKKDKRPRTDD
        G +   +P  +LL VKQ+  ++LR Y+TRFN E L V+G ++   L A  + L+ E  L SI       +TEI     + +   +       + RP+   
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQDRKKDKRPRTDD

Query:  SGRGRADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPR
        +  GR +   GRG      +F ++TP   P   + M+IRN   LK+ G++ +  D+R + +YC FHRDHGH+T NC  LK +IE LI+ G L+  + + +
Subjt:  SGRGRADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPR

Query:  AEAEPDQRWSRQRRTP
         E  P  + +RQ+R P
Subjt:  AEAEPDQRWSRQRRTP

A0A6J1CNT2 uncharacterized protein LOC1110128054.0e-2941.78Show/hide
Query:  KQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQ----------DRKKDKRPRTDDSGRGR
        +++  +SL DY+TRFN E LQVEG  +  +L+A    + DE L  S   + +R  +   E  +R QR+ S  +           R   KR R+ D  +G 
Subjt:  KQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQ----------DRKKDKRPRTDDSGRGR

Query:  ADHDHGRG-RAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPRA--E
              R  +  P  KFEKYT T VP +QVLMEI+N  LLK+  RM +S+ +R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE V EP+A   
Subjt:  ADHDHGRG-RAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPRA--E

Query:  AEPDQRWSRQRRT
         E D+  +R+ RT
Subjt:  AEPDQRWSRQRRT

A0A6J1DWY0 uncharacterized protein LOC1110252931.3e-3543.86Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR
        G R   +P   LLT+KQ+  +SLRDY+ RFN+E LQVEG  +  +L+A  + + DE L  S   + +R      E  +R QR+ S           D  R
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR

Query:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN
           KR R+ D  +G R +      +  P  KFEKYTPT VP +QVLMEI++  LLK+  RMK+S+ +R K +YCLFHRDHGH+T++C  LK+E+E LI+ 
Subjt:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN

Query:  GYLKESVGEPRA--EAEPDQRWSRQRRT
        GYLKE V EP+A    E D+  +R+ RT
Subjt:  GYLKESVGEPRA--EAEPDQRWSRQRRT

A0A6J1DYL6 uncharacterized protein LOC1110257858.1e-3039.91Show/hide
Query:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR
        G R   +P   LLT+KQ+  +SL DY+ RFN E LQ+E   +  +L+A  + + DE L  S   + ++  +   E  +R QR+ S           D  R
Subjt:  GARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSV----------DQDR

Query:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN
           KR R+ D  +G R +      +  P  KFEKYTPT VP +QVLMEI++  LLK+  RMK  + +R K +YCLFHRDH H+T++   LK+E+E LI+ 
Subjt:  KKDKRPRTDDSGRG-RADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN

Query:  GYLKESVGEPRA--EAEPDQRWSRQRRT
        GYL+E V EP+A    E ++  +R+ RT
Subjt:  GYLKESVGEPRA--EAEPDQRWSRQRRT

A0A6J1E1B3 uncharacterized protein LOC1110255213.6e-2233.76Show/hide
Query:  RKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLV---------AITARLEDERLLSSIEVYER-RGVTEIKE-VRTRTQR-HSSVDQDRK-K
        RK   +L T++Q+  ++L++Y+TRF +E L+V   ++ + +           +T +L +E   +  EV ++ + V + +E +RT+T R    +DQ R  K
Subjt:  RKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLV---------AITARLEDERLLSSIEVYER-RGVTEIKE-VRTRTQR-HSSVDQDRK-K

Query:  DK-------RPRTDDSGRGRADH---DHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGR---MKSSADRRDKSQYCLFHRDHGHSTRNCIQL
        DK       + +   S   +AD+   D  R R+ P   +E+YTPT +P  ++L  I  TG+ K L R   ++   ++R+K +YC FHRDHGH+T NC +L
Subjt:  DK-------RPRTDDSGRGRADH---DHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGR---MKSSADRRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIQNGYLKESVGEPRAEAEPDQRWSRQRRTP
        K +IE LIQ GY K+ VG+ R+ +   +   ++ RTP
Subjt:  KDEIEALIQNGYLKESVGEPRAEAEPDQRWSRQRRTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGAGCTAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCATGTAA
GAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAACGAGGGAGCAACCCTAGTAGCCATAACAGCCAGACTGGAAGACGAAAGAC
TGCTTAGTTCAATAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAACACAAAGACATTCTTCAGTCGATCAGGACAGAAAAAAAGATAAG
AGACCACGGACAGACGATAGTGGTCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCTTTCGGTAAGTTTGAGAAATACACCCCAACTGCTGTTCCACA
GAAGCAAGTTTTGATGGAAATCCGAAATACGGGCCTTTTGAAATTCCTAGGGAGGATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGG
ACCATGGGCATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTCCGTTGGTGAACCCAGGGCCGAGGCCGAG
CCTGACCAAAGATGGTCGAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGG
AAGCAAGGTCCAAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCTTCTTTGGAGTTCACGTGATATGGACTGTGTATACTTGCACAGAGTTCT
AG
mRNA sequenceShow/hide mRNA sequence
ATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGAGCTAGAGAACTGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCATGTAA
GAGCTTGCGTGATTACATAACGCGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAACGAGGGAGCAACCCTAGTAGCCATAACAGCCAGACTGGAAGACGAAAGAC
TGCTTAGTTCAATAGAAGTATATGAGCGCAGAGGAGTTACTGAAATCAAAGAGGTCAGAACGAGAACACAAAGACATTCTTCAGTCGATCAGGACAGAAAAAAAGATAAG
AGACCACGGACAGACGATAGTGGTCGAGGCCGAGCCGACCATGACCATGGCCGAGGCCGAGCACATCCTTTCGGTAAGTTTGAGAAATACACCCCAACTGCTGTTCCACA
GAAGCAAGTTTTGATGGAAATCCGAAATACGGGCCTTTTGAAATTCCTAGGGAGGATGAAGTCGAGTGCCGACAGAAGAGACAAGAGCCAGTATTGCCTTTTCCACCGGG
ACCATGGGCATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATTTGAAAGAGTCCGTTGGTGAACCCAGGGCCGAGGCCGAG
CCTGACCAAAGATGGTCGAGACAAAGAAGAACCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAGGTTCGAGCAGGAAGAGGAAAGCTATTGCCAGGG
AAGCAAGGTCCAAACCAGAATATCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACCCTTCTTTGGAGTTCACGTGATATGGACTGTGTATACTTGCACAGAGTTCT
AG
Protein sequenceShow/hide protein sequence
MPTKAGWTSTASQMQSGARELRKPHINLLTVKQQPCKSLRDYITRFNDEALQVEGYNEGATLVAITARLEDERLLSSIEVYERRGVTEIKEVRTRTQRHSSVDQDRKKDK
RPRTDDSGRGRADHDHGRGRAHPFGKFEKYTPTAVPQKQVLMEIRNTGLLKFLGRMKSSADRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKESVGEPRAEAE
PDQRWSRQRRTPTRDQNHLWRTSWRRFEQEEESYCQGSKVQTRISRYVLCPSSKGTPFFGVHVIWTVYTCTEF