; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041109 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041109
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:12173135..12175003
RNA-Seq ExpressionLag0041109
SyntenyLag0041109
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_028178287.1 uncharacterized protein LOC114365810 [Ostrinia furnacalis]8.8e-0826.74Show/hide
Query:  KAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGRHGHPRGAYTLLGKGLGRPRKFP
        +A GG+G + A   A       +     +  GGLG S A+ +A+    G         WGGLG S A+ QA  +         G +  LG G        
Subjt:  KAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGRHGHPRGAYTLLGKGLGRPRKFP

Query:  SLSSSCCSHPGVRTLFWGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIQGGAYTLLGKGLGRPRKFPSLSSSCCSHPGVRTLF
        +  +   ++ G         WGG G   A  QA         L   + WGG G   A+ QA  +   G +  LG G        +  +   ++ G     
Subjt:  SLSSSCCSHPGVRTLFWGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIQGGAYTLLGKGLGRPRKFPSLSSSCCSHPGVRTLF

Query:  WGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQASWSSQGGAYTLLGKG
            WGG G   A  QA         L     WGG G   A+ QA         L     WGGLG S A+ QA  ++  G +  LG G
Subjt:  WGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQASWSSQGGAYTLLGKG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTG
TCATGGTCATCCCAGGGGTGCGTACGCTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGG
CCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACGCTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCA
AGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGC
GTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGCGTCATGGTCATCCCAGGGGTGCGTACACT
CTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCA
AGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAG
CTGTTGTAGTCATCCAGGGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCAGGGGTGCGT
ACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTC
TTCAAGCGTCATGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGG
GGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAG
CTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAG
CCTCTCTTCAAGTTGTTGTAGTCATCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTG
TCATGGTCATCCCAGGGGTGCGTACGCTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACA
CTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGG
CCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACGCTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCA
AGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGC
GTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGCGTCATGGTCATCCCAGGGGTGCGTACACT
CTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCA
AGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAG
CTGTTGTAGTCATCCAGGGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCAGGGGTGCGT
ACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGG
AGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTC
TTCAAGCGTCATGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAGTCATCCCAGG
GGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAG
CTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAG
CCTCTCTTCAAGTTGTTGTAGTCATCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTTTCTTCAAGCTGTTGTAG
Protein sequenceShow/hide protein sequence
MVGLGVGMFGLGMTMRTLFWGKGLGRPRKFPSLSSSCHGHPRGAYALLGKSLGRPRKFPSLSSSCCSHPRGAYTLLGKSLGRPRKFPSLSSSCCSHPRGAYTLLGKSLGR
PRKFPGLSSSVMVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQAVVVIPGRHGHPRGAYT
LLGKGLGRPRKFPSLSSSCCSHPGVRTLFWGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIQGGAYTLLGKGLGRPRKFPSLSSSCCSHPGVR
TLFWGKAWGGQGNSRAFLQAVVVIPGVRTLFWGKAWGGQGNSRASLQAVVVIPGVRTLFWGKAWGGLGNSRASLQASWSSQGGAYTLLGKGLGRPRKFPSLSSSCCSHPR
GAYTLLGKGLGRPRKFPSLSSSCCSHPRGAYTLLGKSLGRPRKFPGLSSSVMVIPGVRTLFWGKAWGGQGNSRASLQVVVVIQGCVHSSGERLGEAKEIPEPFFKLL