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Lag0041129 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041129
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:12520037..12521065
RNA-Seq ExpressionLag0041129
SyntenyLag0041129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68200.1 hypothetical protein VITISV_039764 [Vitis vinifera]3.7e-1830.58Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK
        IIFC   +  +     IL+     SSL  N AK+ LI I  + ++++  A  +GCR  + PT YLG PLG ++K  + W      G    M  + ALW++
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK

Query:  VIASIHGMDPF--GWKAGDISNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNP
           S  G       +K G+   K +FW D+WC N     SFP L+A++ ++  ++ E WD    Q  W+++  R   D E D    L   +  ++++S  
Subjt:  VIASIHGMDPF--GWKAGDISNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNP

Query:  DCIHWQ
        D + W+
Subjt:  DCIHWQ

CAN77166.1 hypothetical protein VITISV_029835 [Vitis vinifera]2.2e-1826.51Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWS--------------WRKSAG
        +IFC      +     IL+     S L  N AK+ LI +  + DE++  A  +GCR  A PT YLG PLG ++K  + W               WR +  
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWS--------------WRKSAG

Query:  TSYGMGEKEALWRKVIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECW
              EK+ LW+ VI   +G +   WK  ++                              N+  FW D+WC N +   S+P L+ ++ +K   + E W
Subjt:  TSYGMGEKEALWRKVIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECW

Query:  DQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE
        D    Q  W+L+L R   D E+D    ++  +   +++   D + W+RE
Subjt:  DQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE

RVW79734.1 putative mitochondrial protein [Vitis vinifera]5.2e-2028.09Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK
        IIFC   +  +     IL+     S L  N AK+ +I I  + +++   A  +GCR  + PT YLG PL  N+K  + W W +         EKE LW+K
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK

Query:  VIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLR
        VI   +G   FGW+  +                                K  FW D+WC N +   +FP L+A++  +  ++ E WD    Q  W+++  
Subjt:  VIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLR

Query:  RGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE
        R   D ELD    L   +  ++++S  D + W+ E
Subjt:  RGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]1.7e-2344.96Show/hide
Query:  WSWRKSAGTSYGMGEKEALWRKVIASIHGMDPFGWKAGDISNKK---RFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFDR
        W WR S        E EALWRKVI+SI+G+DP GW   D   K    RFW D+W    +    FPDLYAIS  K   + +CW    +TWDL  RRGLFDR
Subjt:  WSWRKSAGTSYGMGEKEALWRKVIASIHGMDPFGWKAGDISNKK---RFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFDR

Query:  ELDHWMSLVEKISAVQLNSNPDCIHWQRE
        EL+ W  +VE++    L    D + W  E
Subjt:  ELDHWMSLVEKISAVQLNSNPDCIHWQRE

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]6.1e-2933.59Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYK------------------------RK
        IIFCP  +G + +WW ++S+  KGS L  N AKTSLIGIN   +E     D +GCR E     YLG PLGGN++                        R 
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYK------------------------RK

Query:  NFWSWRKSAGT----------------SYGMG-------------------EKEALWRKVIASIHGMDPFGW--KAGDISNKKR----------------
         FWS   S G                   G+G                   E+ ALWR+VIASI+G+D +GW  KA     K R                
Subjt:  NFWSWRKSAGT----------------SYGMG-------------------EKEALWRKVIASIHGMDPFGW--KAGDISNKKR----------------

Query:  -----------FWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFD
                   FW D+W  N      FPD++A+S  +   + +CW++E QTWDL LRRGLFD
Subjt:  -----------FWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFD

TrEMBL top hitse value%identityAlignment
A0A438H5A3 Putative mitochondrial protein2.5e-2028.09Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK
        IIFC   +  +     IL+     S L  N AK+ +I I  + +++   A  +GCR  + PT YLG PL  N+K  + W W +         EKE LW+K
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK

Query:  VIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLR
        VI   +G   FGW+  +                                K  FW D+WC N +   +FP L+A++  +  ++ E WD    Q  W+++  
Subjt:  VIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLR

Query:  RGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE
        R   D ELD    L   +  ++++S  D + W+ E
Subjt:  RGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE

A0A6J1D884 uncharacterized protein LOC1110178198.3e-2444.96Show/hide
Query:  WSWRKSAGTSYGMGEKEALWRKVIASIHGMDPFGWKAGDISNKK---RFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFDR
        W WR S        E EALWRKVI+SI+G+DP GW   D   K    RFW D+W    +    FPDLYAIS  K   + +CW    +TWDL  RRGLFDR
Subjt:  WSWRKSAGTSYGMGEKEALWRKVIASIHGMDPFGWKAGDISNKK---RFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFDR

Query:  ELDHWMSLVEKISAVQLNSNPDCIHWQRE
        EL+ W  +VE++    L    D + W  E
Subjt:  ELDHWMSLVEKISAVQLNSNPDCIHWQRE

A0A6J1E196 uncharacterized protein LOC1110250193.0e-2933.59Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYK------------------------RK
        IIFCP  +G + +WW ++S+  KGS L  N AKTSLIGIN   +E     D +GCR E     YLG PLGGN++                        R 
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYK------------------------RK

Query:  NFWSWRKSAGT----------------SYGMG-------------------EKEALWRKVIASIHGMDPFGW--KAGDISNKKR----------------
         FWS   S G                   G+G                   E+ ALWR+VIASI+G+D +GW  KA     K R                
Subjt:  NFWSWRKSAGT----------------SYGMG-------------------EKEALWRKVIASIHGMDPFGW--KAGDISNKKR----------------

Query:  -----------FWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFD
                   FW D+W  N      FPD++A+S  +   + +CW++E QTWDL LRRGLFD
Subjt:  -----------FWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFD

A5BQA2 Uncharacterized protein1.8e-1830.58Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK
        IIFC   +  +     IL+     SSL  N AK+ LI I  + ++++  A  +GCR  + PT YLG PLG ++K  + W      G    M  + ALW++
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRK

Query:  VIASIHGMDPF--GWKAGDISNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNP
           S  G       +K G+   K +FW D+WC N     SFP L+A++ ++  ++ E WD    Q  W+++  R   D E D    L   +  ++++S  
Subjt:  VIASIHGMDPF--GWKAGDISNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNP

Query:  DCIHWQ
        D + W+
Subjt:  DCIHWQ

A5BQN8 Reverse transcriptase domain-containing protein1.1e-1826.51Show/hide
Query:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWS--------------WRKSAG
        +IFC      +     IL+     S L  N AK+ LI +  + DE++  A  +GCR  A PT YLG PLG ++K  + W               WR +  
Subjt:  IIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWS--------------WRKSAG

Query:  TSYGMGEKEALWRKVIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECW
              EK+ LW+ VI   +G +   WK  ++                              N+  FW D+WC N +   S+P L+ ++ +K   + E W
Subjt:  TSYGMGEKEALWRKVIASIHGMDPFGWKAGDI-----------------------------SNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECW

Query:  DQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE
        D    Q  W+L+L R   D E+D    ++  +   +++   D + W+RE
Subjt:  DQE--QQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTTTTTGTCCCCATAATGAGGGAGCCATCTGCAAATGGTGGGAAATTCTTTCTGTTATCTTTAAAGGTTCGAGCCTCTCAGCTAACAAAGCCAAGACTTCGTT
GATAGGGATTAATTCCCAAGGTGATGAAGTGAAAAGGTGGGCTGATATGGTTGGTTGCCGTGAAGAAGCTCGTCCTACCAATTATTTGGGATTCCCCCTTGGTGGTAATT
ATAAACGAAAAAACTTCTGGTCATGGAGAAAATCAGCAGGGACTTCTTATGGAATGGGGGAGAAAGAAGCCTTGTGGAGAAAGGTGATTGCTAGCATTCATGGTATGGAT
CCTTTTGGTTGGAAAGCTGGAGACATTTCTAACAAGAAAAGATTTTGGGAAGACAGATGGTGTGACAACTATTCGTTCCAAGTCTCCTTCCCTGACCTGTATGCCATTTC
TGAAAATAAAGGAAAATCCATCTTTGAGTGCTGGGATCAGGAGCAACAAACTTGGGACTTAAAGCTTCGTAGAGGGTTGTTTGACAGGGAATTGGATCACTGGATGTCCT
TGGTGGAGAAAATCAGCGCTGTCCAATTGAACTCCAACCCGGACTGTATTCACTGGCAGCGAGAAGTATACTACCAAATCCTTCTTCCAAAAGTCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATTTTTTGTCCCCATAATGAGGGAGCCATCTGCAAATGGTGGGAAATTCTTTCTGTTATCTTTAAAGGTTCGAGCCTCTCAGCTAACAAAGCCAAGACTTCGTT
GATAGGGATTAATTCCCAAGGTGATGAAGTGAAAAGGTGGGCTGATATGGTTGGTTGCCGTGAAGAAGCTCGTCCTACCAATTATTTGGGATTCCCCCTTGGTGGTAATT
ATAAACGAAAAAACTTCTGGTCATGGAGAAAATCAGCAGGGACTTCTTATGGAATGGGGGAGAAAGAAGCCTTGTGGAGAAAGGTGATTGCTAGCATTCATGGTATGGAT
CCTTTTGGTTGGAAAGCTGGAGACATTTCTAACAAGAAAAGATTTTGGGAAGACAGATGGTGTGACAACTATTCGTTCCAAGTCTCCTTCCCTGACCTGTATGCCATTTC
TGAAAATAAAGGAAAATCCATCTTTGAGTGCTGGGATCAGGAGCAACAAACTTGGGACTTAAAGCTTCGTAGAGGGTTGTTTGACAGGGAATTGGATCACTGGATGTCCT
TGGTGGAGAAAATCAGCGCTGTCCAATTGAACTCCAACCCGGACTGTATTCACTGGCAGCGAGAAGTATACTACCAAATCCTTCTTCCAAAAGTCTTGTAA
Protein sequenceShow/hide protein sequence
MIIFCPHNEGAICKWWEILSVIFKGSSLSANKAKTSLIGINSQGDEVKRWADMVGCREEARPTNYLGFPLGGNYKRKNFWSWRKSAGTSYGMGEKEALWRKVIASIHGMD
PFGWKAGDISNKKRFWEDRWCDNYSFQVSFPDLYAISENKGKSIFECWDQEQQTWDLKLRRGLFDRELDHWMSLVEKISAVQLNSNPDCIHWQREVYYQILLPKVL