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Lag0041159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr13:13009053..13012647
RNA-Seq ExpressionLag0041159
SyntenyLag0041159
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5468871.1 hypothetical protein F2P56_012982 [Juglans regia]1.9e-0632.95Show/hide
Query:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDW
        G+++R+  G++M +    K  + D  +AE YA  K++EL RD+ FG  I E D   +  ++N E ED+S + C+I    + ++ R  W
Subjt:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDW

KAF5945963.1 hypothetical protein HYC85_016191 [Camellia sinensis]1.3e-0437.97Show/hide
Query:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTV
        G+++R+ +G+VM + +       D D AE YA  K++EL RD+GF    LE DS R+ + L  E E +SE+  ++  TV
Subjt:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTV

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]6.5e-0738.2Show/hide
Query:  GMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRI
        G+  II+RD  GQV+ SAT   E+V  VD AE  A V+ L +  + G  P +LETDS R+  L  R++E +S+   +I +    +  R+
Subjt:  GMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRI

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]3.3e-1139.53Show/hide
Query:  LVEWAKGYILAFREAGRRSREEGRETICRERIVW-------------------RARGMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVR
        LVEWA  Y++ FREA   +   GR T   E ++W                         GII+R+  GQVM SAT   EN++ VDMAE    V+ L+L  
Subjt:  LVEWAKGYILAFREAGRRSREEGRETICRERIVW-------------------RARGMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVR

Query:  DMGFGPAILETDSSRVCQLLNREREDVSE
         +G  P ILETDSSR+  L ++  ED+SE
Subjt:  DMGFGPAILETDSSRVCQLLNREREDVSE

XP_042973011.1 uncharacterized protein LOC122304814 [Carya illinoinensis]1.3e-0434.83Show/hide
Query:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDWR
        G+I+R+  G+VM++    K NV D   AE YA  K+++L RD+ F   I E D+  +   +N + ED+S    L+    R ++R  +WR
Subjt:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDWR

TrEMBL top hitse value%identityAlignment
A0A2I4H7J5 uncharacterized protein LOC1090142171.5e-0431.82Show/hide
Query:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDW
        GI++RD  G+VM++    K++V    +AE  A  +S++L +++GFG  ++E D+  + + +  +  D SE+  LI  T R   + I W
Subjt:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDW

A0A2I4HFP5 uncharacterized protein LOC1089884772.5e-0433.33Show/hide
Query:  RARGM-AGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDWR
        +AR M AG+I+R+  G+VM +    K++V +  +AE YA   +++L RD+ F   I E D+  V   +N + ED+S +  +I      I+  I W+
Subjt:  RARGM-AGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDWR

A0A6J1CDQ4 uncharacterized protein LOC1110105333.1e-0738.2Show/hide
Query:  GMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRI
        G+  II+RD  GQV+ SAT   E+V  VD AE  A V+ L +  + G  P +LETDS R+  L  R++E +S+   +I +    +  R+
Subjt:  GMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRI

A0A6J1CIF1 uncharacterized protein LOC1110112371.6e-1139.53Show/hide
Query:  LVEWAKGYILAFREAGRRSREEGRETICRERIVW-------------------RARGMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVR
        LVEWA  Y++ FREA   +   GR T   E ++W                         GII+R+  GQVM SAT   EN++ VDMAE    V+ L+L  
Subjt:  LVEWAKGYILAFREAGRRSREEGRETICRERIVW-------------------RARGMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVR

Query:  DMGFGPAILETDSSRVCQLLNREREDVSE
         +G  P ILETDSSR+  L ++  ED+SE
Subjt:  DMGFGPAILETDSSRVCQLLNREREDVSE

A0A7J7GYW5 Uncharacterized protein6.5e-0537.97Show/hide
Query:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTV
        G+++R+ +G+VM + +       D D AE YA  K++EL RD+GF    LE DS R+ + L  E E +SE+  ++  TV
Subjt:  GIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAILETDSSRVCQLLNREREDVSEWVCLISFTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCAATGTGGTCGGCCCGGAACAAAGCTCGTCTTCAGGGGCTGAAAGGCCGAGTGGGCTAGTGGAATGGGCTAAAGGGTATATACTGGCTTTTCGTGAGGCTGG
GAGGAGAAGTAGGGAAGAGGGTCGAGAGACGATTTGTCGTGAGAGGATAGTATGGCGGGCCCGAGGAATGGCTGGGATCATTGTGCGAGATCCTATGGGCCAAGTGATGC
TGTCGGCGACTTTCACTAAGGAAAATGTGAGAGATGTTGACATGGCTGAAGGATATGCAACTGTGAAAAGTCTGGAGCTAGTGAGAGATATGGGCTTCGGCCCAGCAATT
CTTGAGACAGACTCGAGTAGAGTTTGCCAGCTCCTCAATCGAGAACGCGAAGATGTCTCTGAGTGGGTTTGTTTGATTTCATTCACCGTGAGGGGAATCAGGCGGCGCAT
CGATTGGCGAGGGGAGGTTTTCTGTTCCCTTTTCCTTTGTGTTGTGTATGATTGTTTGGACTACATTGAGGAGATTGCATGTTCATGGGGGTTTGGTTGTTCTTGCATGC
TAGTGGTTATTAGGCTGACGATGGTTGCTTTTGAGCACCAGGTCGACCACAACCGCCAGCCTCCCCTCCTCTCCGACTTCGCTCTCCATCGCCGCTGGTCACGAAGTCGC
ATTACTCTGACGCAGCAACTCCCTCCCCTTCGATTTCTCTGTCGTCTTCTTCCAGATCTGTCGCACCACACCAGATTCGCTGCTCTCTCGCCGTGGGTGGTGGAAGTTGA
GGTCAGGGTAATAGATCTAAGGCGAGTAGCAGAGCCGAGCAGATATGAGTCAGATCTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCAATGTGGTCGGCCCGGAACAAAGCTCGTCTTCAGGGGCTGAAAGGCCGAGTGGGCTAGTGGAATGGGCTAAAGGGTATATACTGGCTTTTCGTGAGGCTGG
GAGGAGAAGTAGGGAAGAGGGTCGAGAGACGATTTGTCGTGAGAGGATAGTATGGCGGGCCCGAGGAATGGCTGGGATCATTGTGCGAGATCCTATGGGCCAAGTGATGC
TGTCGGCGACTTTCACTAAGGAAAATGTGAGAGATGTTGACATGGCTGAAGGATATGCAACTGTGAAAAGTCTGGAGCTAGTGAGAGATATGGGCTTCGGCCCAGCAATT
CTTGAGACAGACTCGAGTAGAGTTTGCCAGCTCCTCAATCGAGAACGCGAAGATGTCTCTGAGTGGGTTTGTTTGATTTCATTCACCGTGAGGGGAATCAGGCGGCGCAT
CGATTGGCGAGGGGAGGTTTTCTGTTCCCTTTTCCTTTGTGTTGTGTATGATTGTTTGGACTACATTGAGGAGATTGCATGTTCATGGGGGTTTGGTTGTTCTTGCATGC
TAGTGGTTATTAGGCTGACGATGGTTGCTTTTGAGCACCAGGTCGACCACAACCGCCAGCCTCCCCTCCTCTCCGACTTCGCTCTCCATCGCCGCTGGTCACGAAGTCGC
ATTACTCTGACGCAGCAACTCCCTCCCCTTCGATTTCTCTGTCGTCTTCTTCCAGATCTGTCGCACCACACCAGATTCGCTGCTCTCTCGCCGTGGGTGGTGGAAGTTGA
GGTCAGGGTAATAGATCTAAGGCGAGTAGCAGAGCCGAGCAGATATGAGTCAGATCTACTTTGA
Protein sequenceShow/hide protein sequence
MVGNVVGPEQSSSSGAERPSGLVEWAKGYILAFREAGRRSREEGRETICRERIVWRARGMAGIIVRDPMGQVMLSATFTKENVRDVDMAEGYATVKSLELVRDMGFGPAI
LETDSSRVCQLLNREREDVSEWVCLISFTVRGIRRRIDWRGEVFCSLFLCVVYDCLDYIEEIACSWGFGCSCMLVVIRLTMVAFEHQVDHNRQPPLLSDFALHRRWSRSR
ITLTQQLPPLRFLCRLLPDLSHHTRFAALSPWVVEVEVRVIDLRRVAEPSRYESDLL