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Lag0041160 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041160
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:13012720..13013382
RNA-Seq ExpressionLag0041160
SyntenyLag0041160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK66393.1 uncharacterized protein A4U43_C06F7380 [Asparagus officinalis]2.0e-2633.63Show/hide
Query:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH
        S +WRSL+WGKE+L+M +RW+VG G QI++    WIP+    +V S  ++  +ATVA+L+  SR W+  L+ R F  +EA +ILSIP+ R+  VD ++WH
Subjt:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH

Query:  YEKSG---------------------SSQSKVDTSWLSQLSWRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFWEC
        Y K+G                     +S S V  + LS   W+   G +LP  I         G     D L ++ + +   C  C    ES +H  W+C
Subjt:  YEKSG---------------------SSQSKVDTSWLSQLSWRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFWEC

Query:  KRPDRSYE---RQDLGRLWRESE
        KR  + ++     D+  +WRE +
Subjt:  KRPDRSYE---RQDLGRLWRESE

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]8.5e-2531.92Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD
        +G+RPSF+WRS++WG+++++  +RWK+G G Q+ IY SNW+PR    K  SP +L   A VA+L+  ++ W + +  +HF   +A +I+ I +   P  D
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD

Query:  SVIWHYEKSG------------------------SSQSKVDTSWLSQL-------SWRAGPHLPPLILSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGK
          +WHY+K G                        SS S+ +  W ++L        WRA  +L P              T  NL RR I    +C  CG 
Subjt:  SVIWHYEKSG------------------------SSQSKVDTSWLSQL-------SWRAGPHLPPLILSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGK

Query:  WGESSIHIFWECK
          E  IH   +CK
Subjt:  WGESSIHIFWECK

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.2e-2633.04Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASR-GWDQTLLERHFNAAEAILILSIPIRRHPSV
        +   PS+IWRS++WG++LL+  +RW++G G+ + IYG NW+P    LK+ S   L   + V+ L+     GW   ++   F   EA  ILSIPI R    
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASR-GWDQTLLERHFNAAEAILILSIPIRRHPSV

Query:  DSVIWHYEKSG----------------------SSQSKVDTSWLSQLSWRAGPHLPPLILSM-----TGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGE
        D +IW+YEK+G                      SS S+    W +   W+   H+P  I              GC    NL +RG+++ + C FCG+ GE
Subjt:  DSVIWHYEKSG----------------------SSQSKVDTSWLSQLSWRAGPHLPPLILSM-----TGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGE

Query:  SSIHIFWECKRPDRSYERQDLGRL
         SIH+FW CK  +  +     G+L
Subjt:  SSIHIFWECKRPDRSYERQDLGRL

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]1.4e-2431.31Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD
        +G+ PSFIWRS++WG+++L+   RW++G GE+I+I  SNWIPR T  K+    SL + A V+EL+  ++ W+++++ + F   +A +I SI + R P  D
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD

Query:  SVIWHYEKSG--------------------SSQSKVDTSWLSQLSWRAGPHLPPLI-LSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFW
         +IWHY++ G                    +S +     W  Q  W+   +LP  I + +         T +NL RR I    +C  C +  E   H   
Subjt:  SVIWHYEKSG--------------------SSQSKVDTSWLSQLSWRAGPHLPPLI-LSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFW

Query:  ECKRPDRSYERQDL
        ECK   + +   D+
Subjt:  ECKRPDRSYERQDL

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]5.5e-2430.52Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD
        +G+ PSFIWRS++WG++++    +W++G G+ I ++  NW+PR    K  S  SL +DA VAEL+     W++ L+ RHF   +A  I+ I + R P  D
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD

Query:  SVIWHYEKSG------------------------SSQSKVDTSWLSQL-------SWRAGPHLPPLILSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGK
         VIWHY+K G                        +++++ +  WL  L       +WRA  +L P              + +NL +R +    +C FC K
Subjt:  SVIWHYEKSG------------------------SSQSKVDTSWLSQL-------SWRAGPHLPPLILSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGK

Query:  WGESSIHIFWECK
          E+  H    CK
Subjt:  WGESSIHIFWECK

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein1.1e-2240.87Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD
        +G++PSF+WRS++WG++++   +RW++G G+++KIY S+WIPR    K  S  +L  D TVAEL+  ++ W ++L+++HFN  +A LI  I +   P  D
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVD

Query:  SVIWHYEKSGSSQSK
         ++WHY+K G+   K
Subjt:  SVIWHYEKSGSSQSK

A0A5P1EL44 Uncharacterized protein9.8e-2733.63Show/hide
Query:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH
        S +WRSL+WGKE+L+M +RW+VG G QI++    WIP+    +V S  ++  +ATVA+L+  SR W+  L+ R F  +EA +ILSIP+ R+  VD ++WH
Subjt:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH

Query:  YEKSG---------------------SSQSKVDTSWLSQLSWRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFWEC
        Y K+G                     +S S V  + LS   W+   G +LP  I         G     D L ++ + +   C  C    ES +H  W+C
Subjt:  YEKSG---------------------SSQSKVDTSWLSQLSWRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFWEC

Query:  KRPDRSYE---RQDLGRLWRESE
        KR  + ++     D+  +WRE +
Subjt:  KRPDRSYE---RQDLGRLWRESE

A0A6J1DAR4 uncharacterized protein LOC1110189545.7e-2733.04Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASR-GWDQTLLERHFNAAEAILILSIPIRRHPSV
        +   PS+IWRS++WG++LL+  +RW++G G+ + IYG NW+P    LK+ S   L   + V+ L+     GW   ++   F   EA  ILSIPI R    
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASR-GWDQTLLERHFNAAEAILILSIPIRRHPSV

Query:  DSVIWHYEKSG----------------------SSQSKVDTSWLSQLSWRAGPHLPPLILSM-----TGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGE
        D +IW+YEK+G                      SS S+    W +   W+   H+P  I              GC    NL +RG+++ + C FCG+ GE
Subjt:  DSVIWHYEKSG----------------------SSQSKVDTSWLSQLSWRAGPHLPPLILSM-----TGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGE

Query:  SSIHIFWECKRPDRSYERQDLGRL
         SIH+FW CK  +  +     G+L
Subjt:  SSIHIFWECKRPDRSYERQDLGRL

A0A803NGM9 Uncharacterized protein7.8e-2433.81Show/hide
Query:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH
        SF+WRSLMWGK+++    RW+VG GE +++    W+PR  + K+     L  +  VA+L      WD+  +   FN  +A LILS+P       D ++WH
Subjt:  SFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWH

Query:  YEKSG----SSQSKVDTSWLSQLS----------WRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFC-GKWGESSIHIFWECKRPDRS
        Y K+G     S  K+ TS  S+            W+A     +PP I             T  NL +RG+D+ ++C+ C G   E++ H  WECK   RS
Subjt:  YEKSG----SSQSKVDTSWLSQLS----------WRA--GPHLPPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFC-GKWGESSIHIFWECKRPDRS

Query:  YERQDLGRLW
         E   LG  W
Subjt:  YERQDLGRLW

A0A803PEK8 Uncharacterized protein3.3e-2233Show/hide
Query:  GARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDS
        GA  SF+WRSLMWGK+++    RW+VG GE +++    W+ R    K+     L  +  VA+L      WD+  +   FN  +A LILS P       D 
Subjt:  GARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDS

Query:  VIWHYEKSGSSQSKVDTSWLSQLS--------------WRAGPHL--PPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFC-GKWGESSIHIFWECKR
        ++WHY K+G    K      S L+              W+   HL  PP I             T  NL +RG+ L ++C  C G   E++ H  WECKR
Subjt:  VIWHYEKSGSSQSKVDTSWLSQLS--------------WRAGPHL--PPLILSMTGGRDVG-CQTIDNLIRRGIDLPDVCIFC-GKWGESSIHIFWECKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein7.7e-0830.08Show/hide
Query:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWI---PRGTNLKV-----SSPMSLRSDATVAELMTAS-RGWDQTLLERHFNAAEAILILSI
        +G+RPSF+W+S+   +E+L    R  VG GE I I+   W+   P    L++         S+ S   V++L+  S R W + ++E  F   E  LI  +
Subjt:  MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWI---PRGTNLKV-----SSPMSLRSDATVAELMTAS-RGWDQTLLERHFNAAEAILILSI

Query:  PIRRHPSVDSVIWHYEKSGSSQSKVDTSWLSQL
               +DS  W Y  SG    K     L+Q+
Subjt:  PIRRHPSVDSVIWHYEKSGSSQSKVDTSWLSQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCCCGTCCATCATTCATATGGAGGAGCCTAATGTGGGGTAAGGAGCTTTTAGAGATGAGTGTGCGTTGGAAAGTTGGGTATGGGGAACAGATAAAGATCTATGG
ATCCAACTGGATTCCGAGGGGTACTAATTTGAAAGTCAGCTCGCCGATGTCCTTGCGTTCAGATGCCACGGTGGCGGAGCTGATGACGGCCTCGAGAGGGTGGGACCAAA
CCCTGTTGGAACGACACTTTAATGCCGCAGAGGCAATCCTCATCTTATCTATTCCCATTAGACGACATCCCTCAGTGGACTCAGTTATCTGGCATTATGAAAAGTCTGGC
TCTTCTCAGTCAAAAGTGGATACAAGTTGGCTCAGTCAGTTATCCTGGCGCGCGGGGCCTCATCTTCCTCCCCTAATTCTATCCATGACTGGTGGAAGGGATGTTGGCTG
CCAGACGATTGACAACCTGATAAGAAGGGGCATAGACTTGCCAGATGTATGCATCTTCTGCGGGAAGTGGGGGGAATCTAGCATCCACATCTTCTGGGAATGCAAAAGGC
CAGATCGATCCTACGAGAGGCAGGATTTGGGGAGATTGTGGAGAGAGTCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCCCGTCCATCATTCATATGGAGGAGCCTAATGTGGGGTAAGGAGCTTTTAGAGATGAGTGTGCGTTGGAAAGTTGGGTATGGGGAACAGATAAAGATCTATGG
ATCCAACTGGATTCCGAGGGGTACTAATTTGAAAGTCAGCTCGCCGATGTCCTTGCGTTCAGATGCCACGGTGGCGGAGCTGATGACGGCCTCGAGAGGGTGGGACCAAA
CCCTGTTGGAACGACACTTTAATGCCGCAGAGGCAATCCTCATCTTATCTATTCCCATTAGACGACATCCCTCAGTGGACTCAGTTATCTGGCATTATGAAAAGTCTGGC
TCTTCTCAGTCAAAAGTGGATACAAGTTGGCTCAGTCAGTTATCCTGGCGCGCGGGGCCTCATCTTCCTCCCCTAATTCTATCCATGACTGGTGGAAGGGATGTTGGCTG
CCAGACGATTGACAACCTGATAAGAAGGGGCATAGACTTGCCAGATGTATGCATCTTCTGCGGGAAGTGGGGGGAATCTAGCATCCACATCTTCTGGGAATGCAAAAGGC
CAGATCGATCCTACGAGAGGCAGGATTTGGGGAGATTGTGGAGAGAGTCCGAGTAG
Protein sequenceShow/hide protein sequence
MGARPSFIWRSLMWGKELLEMSVRWKVGYGEQIKIYGSNWIPRGTNLKVSSPMSLRSDATVAELMTASRGWDQTLLERHFNAAEAILILSIPIRRHPSVDSVIWHYEKSG
SSQSKVDTSWLSQLSWRAGPHLPPLILSMTGGRDVGCQTIDNLIRRGIDLPDVCIFCGKWGESSIHIFWECKRPDRSYERQDLGRLWRESE