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Lag0041170 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041170
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:13236835..13238034
RNA-Seq ExpressionLag0041170
SyntenyLag0041170
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]5.4e-2434.64Show/hide
Query:  TRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGST-----------------------REMARQLGDKIGTVEEVGGSQGGDWTGPI
        T++ES G+N+F  +F SK EK R++  GPW FDRSL+V+ EP   G                         +E+ +++G +IG V+EV     G+  G  
Subjt:  TRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGST-----------------------REMARQLGDKIGTVEEVGGSQGGDWTGPI

Query:  LRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQ-----YGDWLRA
        +R+R+++ + RPL +   L+ E+G +    + YE+LPDFC+ CG +GH  REC       L+ +G+      YG W+RA
Subjt:  LRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQ-----YGDWLRA

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]3.7e-2536.99Show/hide
Query:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWTGPIL
        +IES G N F  +F  + +K RV++ GPW FDR+L+VL EP+  G                         +E+ ++LG  IG VEE+   + G+  G   
Subjt:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWTGPIL

Query:  RIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA
        RIRVL+ +  PL++   L+ E   + + PV+YERLPDFCY CG +GH  +EC   +    EQ    YG W++A
Subjt:  RIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.0e-3441.81Show/hide
Query:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT
        H +TR E  G N++ I F+S  EK RV+S+GPW F++SL+VL  P +                          + EMA  LG K+G VEE+ G     W 
Subjt:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT

Query:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA
        GP +R+RV + + +PLRRG +L++ +G++  CP+ YE+LPDFCY+CG +GHS REC    +       EQYGDWLRA
Subjt:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]4.3e-2942.58Show/hide
Query:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT
        H +TRIE+AG N++ I F++  EK RV S GPW FD+SL++L    +A                         T++MA+ LG ++G VEEV G    DW 
Subjt:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT

Query:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRE
         P L +RV + + +PLRRG +++  +G++  CP+ YERLPDFCY CGC+GHS RE
Subjt:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRE

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]2.4e-2430.8Show/hide
Query:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGSTREMA-----------------------RQLGDKIGTVEEVGGSQGGDWTGPIL
        ++ES G N+F  +F S+ +K RV + GPW FDR+L+VL+EP+  GS ++ +                       R+LG ++G VE++G    G+  G  +
Subjt:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGSTREMA-----------------------RQLGDKIGTVEEVGGSQGGDWTGPIL

Query:  RIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQ-----YGDWLRAGAGLGESGR--RTQEGGVDNAA
        RI+V + + +PL++   L+ E+  +   PV+YERLPDFC+ CGC+GH  REC       +E +G+Q     +G WL+A   L +  +  R +E       
Subjt:  RIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQ-----YGDWLRAGAGLGESGR--RTQEGGVDNAA

Query:  IRRPEIPKPPTEGQVTQDSVPEKAGKEIASASGEGVGVQVSEQGGQGEGG
          R E+PK  +        +P      +    G+  G  ++++  + EGG
Subjt:  IRRPEIPKPPTEGQVTQDSVPEKAGKEIASASGEGVGVQVSEQGGQGEGG

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)9.3e-2235.43Show/hide
Query:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWTGPIL
        +IE  GEN+F  +F S+ +K  ++  GPW FDR+L+ L EP   G                        +++MA +LG  IG VEEV     G+  G  L
Subjt:  RIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWTGPIL

Query:  RIRVLLRLDRPLRRGFQLQDEEGREFRCP--VLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA
        R+R+ + + +PL++  +L+ EE      P  V+YERLPDFC+ CG +GH  REC   +  + ++    YG WL+A
Subjt:  RIRVLLRLDRPLRRGFQLQDEEGREFRCP--VLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA

A0A5C7IMV5 Uncharacterized protein3.5e-2139.07Show/hide
Query:  IESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGSTREMARQLGDKIGTVEEVGGSQGGDWTGPILRIRVLLRLDRPLRRGFQLQD-EEG
        IE    N++A  F+S  ++ +V+  GPW+FD +L+VL+E    G+   + R      G V EV     GD  G  LR+RV + +D+PLRR  ++    +G
Subjt:  IESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGSTREMARQLGDKIGTVEEVGGSQGGDWTGPILRIRVLLRLDRPLRRGFQLQD-EEG

Query:  REFRCPVLYERLPDFCYDCGCLGHSRRECGVI-REGNLEQQGEQYGDWLRA
         E   P+ YERLP+FC+ CG L H+ R C +I  EG L ++   YG WL+A
Subjt:  REFRCPVLYERLPDFCYDCGCLGHSRRECGVI-REGNLEQQGEQYGDWLRA

A0A5C7IT66 CCHC-type domain-containing protein5.8e-2436.68Show/hide
Query:  MESHGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGG
        +E      IE    N++A  F+S  ++ RV+  GPW+FD +L+VL+EP   G+                       T+++ + LG  IG V EV     G
Subjt:  MESHGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGG

Query:  DWTGPILRIRVLLRLDRPLRRGFQLQD-EEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQ-QGEQYGDWLRAGAGLGESGRRTQEGGVD
        D  G  +R+RV + +D PLRR  ++    +G E   P+ YERLP FC+ CG +GHS REC    E  L +  G  YG WLRA A L + GR    G VD
Subjt:  DWTGPILRIRVLLRLDRPLRRGFQLQD-EEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQ-QGEQYGDWLRAGAGLGESGRRTQEGGVD

A0A6J1D765 uncharacterized protein LOC1110179029.6e-3541.81Show/hide
Query:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT
        H +TR E  G N++ I F+S  EK RV+S+GPW F++SL+VL  P +                          + EMA  LG K+G VEE+ G     W 
Subjt:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT

Query:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA
        GP +R+RV + + +PLRRG +L++ +G++  CP+ YE+LPDFCY+CG +GHS REC    +       EQYGDWLRA
Subjt:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRA

A0A6J1DVS4 uncharacterized protein LOC1110235552.1e-2942.58Show/hide
Query:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT
        H +TRIE+AG N++ I F++  EK RV S GPW FD+SL++L    +A                         T++MA+ LG ++G VEEV G    DW 
Subjt:  HGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGS-----------------------TREMARQLGDKIGTVEEVGGSQGGDWT

Query:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRE
         P L +RV + + +PLRRG +++  +G++  CP+ YERLPDFCY CGC+GHS RE
Subjt:  GPILRIRVLLRLDRPLRRGFQLQDEEGREFRCPVLYERLPDFCYDCGCLGHSRRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTCATGGGGCGACGCGCATAGAATCTGCTGGTGAAAATTTATTTGCTATTCAGTTCCGTTCCAAAGGGGAGAAGGGGCGGGTGGTGTCGACAGGTCCATGGGC
CTTTGACCGGTCTCTGGTGGTGCTGAAGGAGCCGAGGTCTGCGGGATCGACAAGGGAGATGGCTCGACAGTTGGGAGATAAGATCGGAACTGTGGAGGAAGTTGGTGGAT
CGCAGGGAGGTGACTGGACAGGGCCGATTCTTCGAATAAGGGTCCTTTTGAGGTTGGATCGCCCACTCAGGAGGGGATTCCAATTGCAGGATGAGGAGGGCAGGGAGTTT
CGGTGTCCGGTCTTGTATGAGCGATTACCAGATTTTTGTTACGACTGTGGCTGCCTGGGGCACTCGAGGAGGGAGTGTGGGGTGATTAGGGAAGGTAATCTGGAACAGCA
GGGCGAACAGTATGGTGATTGGCTGAGAGCAGGGGCAGGGCTTGGGGAGTCTGGAAGGCGCACTCAGGAGGGAGGGGTGGATAATGCAGCGATTCGGAGACCTGAGATCC
CAAAGCCCCCTACTGAGGGACAGGTGACTCAGGATTCTGTTCCTGAGAAAGCAGGGAAGGAGATTGCTAGTGCGTCAGGGGAGGGCGTGGGAGTGCAGGTTAGTGAGCAG
GGAGGTCAGGGGGAAGGGGGTAGTGGAGAGGGGGATAGCGTGGTTGTGGTAGCAAGGGGGGAGGGGTGGCTGATAAGGGAAAGGGGAAGCAGAAGGTGGGGGAGGGGGAT
GGAAGTGATGGGGAAAGGGGGTGGTGGCAGGAACTGGAAGAGAAGGGCGAGAGATGTTTTGTCTGATGTTACCAATCGAGATGTCTCTCTAGGGTCCGTTAATGGCAAGA
GGAAGGCAGAGAGTGGGGAGGGTGTGGAGTTGGGGGGAAAGAAGTTGAAAGGGGGGGAAGTAGAGGGAGTTGTGTTAGGTGTACCTGAGGGACTGATTTGGCGGCGGCTG
GTCCCAGCCCCGCCGGGATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTCATGGGGCGACGCGCATAGAATCTGCTGGTGAAAATTTATTTGCTATTCAGTTCCGTTCCAAAGGGGAGAAGGGGCGGGTGGTGTCGACAGGTCCATGGGC
CTTTGACCGGTCTCTGGTGGTGCTGAAGGAGCCGAGGTCTGCGGGATCGACAAGGGAGATGGCTCGACAGTTGGGAGATAAGATCGGAACTGTGGAGGAAGTTGGTGGAT
CGCAGGGAGGTGACTGGACAGGGCCGATTCTTCGAATAAGGGTCCTTTTGAGGTTGGATCGCCCACTCAGGAGGGGATTCCAATTGCAGGATGAGGAGGGCAGGGAGTTT
CGGTGTCCGGTCTTGTATGAGCGATTACCAGATTTTTGTTACGACTGTGGCTGCCTGGGGCACTCGAGGAGGGAGTGTGGGGTGATTAGGGAAGGTAATCTGGAACAGCA
GGGCGAACAGTATGGTGATTGGCTGAGAGCAGGGGCAGGGCTTGGGGAGTCTGGAAGGCGCACTCAGGAGGGAGGGGTGGATAATGCAGCGATTCGGAGACCTGAGATCC
CAAAGCCCCCTACTGAGGGACAGGTGACTCAGGATTCTGTTCCTGAGAAAGCAGGGAAGGAGATTGCTAGTGCGTCAGGGGAGGGCGTGGGAGTGCAGGTTAGTGAGCAG
GGAGGTCAGGGGGAAGGGGGTAGTGGAGAGGGGGATAGCGTGGTTGTGGTAGCAAGGGGGGAGGGGTGGCTGATAAGGGAAAGGGGAAGCAGAAGGTGGGGGAGGGGGAT
GGAAGTGATGGGGAAAGGGGGTGGTGGCAGGAACTGGAAGAGAAGGGCGAGAGATGTTTTGTCTGATGTTACCAATCGAGATGTCTCTCTAGGGTCCGTTAATGGCAAGA
GGAAGGCAGAGAGTGGGGAGGGTGTGGAGTTGGGGGGAAAGAAGTTGAAAGGGGGGGAAGTAGAGGGAGTTGTGTTAGGTGTACCTGAGGGACTGATTTGGCGGCGGCTG
GTCCCAGCCCCGCCGGGATTATGA
Protein sequenceShow/hide protein sequence
MESHGATRIESAGENLFAIQFRSKGEKGRVVSTGPWAFDRSLVVLKEPRSAGSTREMARQLGDKIGTVEEVGGSQGGDWTGPILRIRVLLRLDRPLRRGFQLQDEEGREF
RCPVLYERLPDFCYDCGCLGHSRRECGVIREGNLEQQGEQYGDWLRAGAGLGESGRRTQEGGVDNAAIRRPEIPKPPTEGQVTQDSVPEKAGKEIASASGEGVGVQVSEQ
GGQGEGGSGEGDSVVVVARGEGWLIRERGSRRWGRGMEVMGKGGGGRNWKRRARDVLSDVTNRDVSLGSVNGKRKAESGEGVELGGKKLKGGEVEGVVLGVPEGLIWRRL
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