CuGenDBv2

Gene ID	Lag0041186
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Chlororespiratory reduction 3, putative isoform 1
Genome location	chr13:13436642..13445031
RNA-Seq Expression	Lag0041186
Synteny	Lag0041186
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR036691 - Endonuclease/exonuclease/phosphatase superfamily IPR038931 - Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600832.1 putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-65

75.96

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MA F CISVTKNVA+ASLNP+DDSHSPP K N     ++PI NPRL RR PKPRRPSVIEIERAIGAGRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        DRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

KAG7031468.1 putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-70

79.23

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MA F CISVTKNVALASLNP+DDSHSPP K N    +++PINNPRL RR PKPRRPSVIEIERAIGAGRFRDADPRQV EF     +++ +    +DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        DRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

XP_022942899.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita moschata]

1.9e-65

75.96

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MA F CISVTKNVA+ASLNP+DDSHSPP K N     ++PI NPRL RR PKPRRPSVIEIERAIGAGRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        DRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

XP_023511915.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo]

6.7e-66

76.5

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MA F CISVTKNVALASLNP+DDSHSPP K N    +++PI NPRL RR PKPRRPSVIEIERAIGAGRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        DRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

XP_038893324.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Benincasa hispida]

1.6e-67

76.09

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MASF  IS+TKNV LASLNP DDSHSPP K N    +++PINNPRL RR PKPRRPSVIEIERAIG GRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
        DRK AFDMF++SFTGKYEGP+MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPFNTPFL++LLM
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJA3 Uncharacterized protein

3.8e-59

69.89

Show/hide

Query:  MASFCCISVTKNVALASLNPT--DDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDL
        MAS   IS TKNVA ASLNP     SHSPPLK N     ++PINNPRL R+   P RPS+IEIERAIG GRFRDADPR                    +L
Subjt:  MASFCCISVTKNVALASLNPT--DDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDL

Query:  EEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
        EED+K AFDMF++SFTGKYE PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPF+TPFL++LLM
Subjt:  EEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

A0A1S3CM65 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1

2.4e-61

71.28

Show/hide

Query:  MASFCCISVTKNVALASLNPT----DDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLL
        MAS   IS+TKNVALASLNP       SHSPPLK N    D++PI  PRL  +   PRRPSVIEIERAIG GRFRDADPR                    
Subjt:  MASFCCISVTKNVALASLNPT----DDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLL

Query:  DLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
        DLEED+K AFDMF++SFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASG+IKLPFNTPFL++LLM
Subjt:  DLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

A0A6J1DQ49 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

2.7e-65

76.09

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        +ASF CISVTKNVALASLN +DDSHSP  KPN T  D++PI N    RR PKPRRPSVIEIERAIGAGRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
        DRKT FDMF+LSFT KYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASG+IKLPF+TPFLD+LLM
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

A0A6J1FSN9 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

9.4e-66

75.96

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE
        MA F CISVTKNVA+ASLNP+DDSHSPP K N     ++PI NPRL RR PKPRRPSVIEIERAIGAGRFRDADPR                    DLEE
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEE

Query:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        DRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  DRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

A0A6J1J6W0 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

6.1e-65

74.73

Show/hide

Query:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRP---PKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLD
        MA F CISVTKNVALASLNP+DDSHSPP K N    +++P+NNP+L RR    PKPRRPSVIEIERAIGAGRFRDADPR                    D
Subjt:  MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRP---PKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLD

Query:  LEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL
        LEEDRK AFDMF++SFTGKYEG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQWVLPIWA SLLVASG+IKLPFNTPFLDQLL
Subjt:  LEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLL

SwissProt top hits

e value

%identity

Alignment

Q9ZVE7 Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

4.3e-23

37.57

Show/hide

Query:  SVTKNVALASLNPTDDSHSP-----PLK-PNATKPDSLPINNPRLSR------RPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTL
        S+T+       + T+DS SP     P K P+ T P   P+   ++S+      +  +  +PS+ +IERA G+G +RD++                     
Subjt:  SVTKNVALASLNPTDDSHSP-----PLK-PNATKPDSLPINNPRLSR------RPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTL

Query:  LDLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
           E D  T FD  +L    K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA G+IKLPF+ PFLD L+M
Subjt:  LDLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

Arabidopsis top hits

e value

%identity

Alignment

AT2G01590.1 chlororespiratory reduction 3

3.0e-24

37.57

Show/hide

Query:  SVTKNVALASLNPTDDSHSP-----PLK-PNATKPDSLPINNPRLSR------RPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTL
        S+T+       + T+DS SP     P K P+ T P   P+   ++S+      +  +  +PS+ +IERA G+G +RD++                     
Subjt:  SVTKNVALASLNPTDDSHSP-----PLK-PNATKPDSLPINNPRLSR------RPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTL

Query:  LDLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM
           E D  T FD  +L    K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA G+IKLPF+ PFLD L+M
Subjt:  LDLEEDRKTAFDMFMLSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTTCTGCTGCATTTCTGTAACCAAAAATGTCGCTCTCGCTTCACTCAATCCCACCGACGACTCTCACTCTCCTCCTCTCAAACCCAACGCCACAAAACCCGA
TTCCCTTCCGATAAACAATCCACGGCTATCGCGGCGGCCGCCAAAACCTCGCCGCCCCTCCGTTATTGAAATCGAACGTGCTATTGGCGCCGGAAGGTTCAGAGACGCCG
ACCCCAGGCAAGTCTCGGAGTTCCTCGCTTCCTGTTCTTCGTATTTAGCGCTCTTCTTAACTCTATTGGATTTGGAAGAAGATCGGAAGACTGCATTTGACATGTTTATG
CTGAGTTTTACGGGGAAATATGAAGGGCCACTCATGAAAAAGCTCCGCGAGACGGGGGAATGGGTAACTAATCAAACTGAAACCAAATTTCAAGCTTCTGGCAAATGGTT
TCTGCTGTTTACGTTTCAATGGGTTCTACCAATTTGGGCATTGTCACTCCTTGTGGCTTCCGGGCTCATTAAGCTACCATTCAACACTCCATTTCTTGATCAACTTCTCA
TGGGTGTTGGGTCTCCTAGGTCGAGAGGTAGAAGGGATTTTTGGGAAGAGCTGGGGGATTTCTTCGGCCTTTGCGGTTCCCCTTGGTGTGTGGCAAGAGACTTTAATGTC
ATCTGCTCTCCTTTAGAGAAATTCTTGGGTGGTAGGGTGACAAAATCCATAAGAGCGTTTAATGATTTTATCGAGGGGTGTTGTTTGGTGGACCCTCCCCTGCTGAATGG
GAAGTTTACTTGGGCCAATAGCAGAGTGCAAAGCGAACGCCAGAAAAGAAAGAATCTCATTGATTCCTGGGAGAATATGATAGGGGTGAAGGTGAAGGGAGAGAAGGAGA
TTGAGGAAGTGATCCTTACGTTCTTCTCAAACCACTATGGTCCAGAGGTAGAGGCTAAACCCTTTGTGGGAGGGTTGGATTGGAGTTCCATTTTGGAGAGTGAGAAGATG
AATTTGGATTCCCCTTTTACTTTGGAAGAGATCAAGAAAGGTGATCCTCTGTCGCCTTTCCTCTTCCTTCTTGTGGTTGATGCTCTTAATAGATTTGTCTCTAAAAGGGA
GGAAAGAGGTAAGGAGGAGACTTTTATGGTGTTGAACCATATGCTCACTTTCTTTAGAGATGATGTCAGGGCTCAAGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASFCCISVTKNVALASLNPTDDSHSPPLKPNATKPDSLPINNPRLSRRPPKPRRPSVIEIERAIGAGRFRDADPRQVSEFLASCSSYLALFLTLLDLEEDRKTAFDMFM
LSFTGKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWVLPIWALSLLVASGLIKLPFNTPFLDQLLMGVGSPRSRGRRDFWEELGDFFGLCGSPWCVARDFNV
ICSPLEKFLGGRVTKSIRAFNDFIEGCCLVDPPLLNGKFTWANSRVQSERQKRKNLIDSWENMIGVKVKGEKEIEEVILTFFSNHYGPEVEAKPFVGGLDWSSILESEKM
NLDSPFTLEEIKKGDPLSPFLFLLVVDALNRFVSKREERGKEETFMVLNHMLTFFRDDVRAQD

Lag0041186 (gene) of Sponge gourd (AG-4) v1 genome