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Lag0041194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr13:13555205..13559651
RNA-Seq ExpressionLag0041194
SyntenyLag0041194
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4279811.1 unnamed protein product [Prunus armeniaca]3.7e-0732.54Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED
        +N DA+W     +GGVGW++ DS G +VQAGCK   R  +   +E   I+E L    L+   S  + L VE+D L ++R L  E       +  + DI+ 
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED

Query:  LAARAGVFSFVKCPRAGNQVVHSLAS
        L  +     F+  PR  N+  H + +
Subjt:  LAARAGVFSFVKCPRAGNQVVHSLAS

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0840Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDH-SRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE
        +NS ASW+E AG GGV W+IHDS GS +   CK L RKW + +LE   + EGL    L  +  S S   I+    L++ R LN    D+      + +I 
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDH-SRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE

Query:  DLAARAGVFSFVKCP
        DL   AG+ SF + P
Subjt:  DLAARAGVFSFVKCP

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.6e-0730.4Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED
        +N++A+W      GG+GWI+ D  G +++A C+ +  + NI  LE+  I EGL    +  +H R   L  E+D L+ +  L+ +C+D +     L +I  
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED

Query:  LAARAGVFSFVKCPRAGNQVVHSLA
        +     + S     R  N+V H LA
Subjt:  LAARAGVFSFVKCPRAGNQVVHSLA

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.8e-0733.33Show/hide
Query:  TINSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE
        T+N+DASW++    GG+GWII    G +V AG +++    N+ LLE + I EGL      T+      L +E D  +V   LN + ED++     + +I 
Subjt:  TINSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE

Query:  DLAARAGVFSFVKCPRAGNQVVHSLASATTGL
        +L     + +F K  R  N   HSLA   + L
Subjt:  DLAARAGVFSFVKCPRAGNQVVHSLASATTGL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.8e-0729.77Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGL------FISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAF
        +N+DA+W      GG+GWI+ D  G +++A C+ +  + NI  LE+  I EGL          +  +H R   L  E+D L+ +  L+ +C+D +     
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGL------FISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAF

Query:  LLDIEDLAARAGVFSFVKCPRAGNQVVHSLA
        L +I  +     + S     R  N+V H LA
Subjt:  LLDIEDLAARAGVFSFVKCPRAGNQVVHSLA

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134128.0e-0830.4Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED
        +N++A+W      GG+GWI+ D  G +++A C+ +  + NI  LE+  I EGL    +  +H R   L  E+D L+ +  L+ +C+D +     L +I  
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED

Query:  LAARAGVFSFVKCPRAGNQVVHSLA
        +     + S     R  N+V H LA
Subjt:  LAARAGVFSFVKCPRAGNQVVHSLA

A0A6J1DNV9 uncharacterized protein LOC1110224031.4e-0733.33Show/hide
Query:  TINSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE
        T+N+DASW++    GG+GWII    G +V AG +++    N+ LLE + I EGL      T+      L +E D  +V   LN + ED++     + +I 
Subjt:  TINSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIE

Query:  DLAARAGVFSFVKCPRAGNQVVHSLASATTGL
        +L     + +F K  R  N   HSLA   + L
Subjt:  DLAARAGVFSFVKCPRAGNQVVHSLASATTGL

A0A6J1DSV1 uncharacterized protein LOC1110236081.4e-0729.77Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGL------FISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAF
        +N+DA+W      GG+GWI+ D  G +++A C+ +  + NI  LE+  I EGL          +  +H R   L  E+D L+ +  L+ +C+D +     
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGL------FISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAF

Query:  LLDIEDLAARAGVFSFVKCPRAGNQVVHSLA
        L +I  +     + S     R  N+V H LA
Subjt:  LLDIEDLAARAGVFSFVKCPRAGNQVVHSLA

A0A6J5UAY2 Reverse transcriptase domain-containing protein2.6e-0631.75Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED
        +N DA+W     +GGVGW++ DS G +VQAG K   R  +   +E   I+E L    ++   S  + L VE+D L V+R +  E          + DI+ 
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED

Query:  LAARAGVFSFVKCPRAGNQVVHSLAS
        L  +     F+  PR  N+  H +A+
Subjt:  LAARAGVFSFVKCPRAGNQVVHSLAS

A0A6J5UV01 Reverse transcriptase domain-containing protein1.8e-0732.54Show/hide
Query:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED
        +N DA+W     +GGVGW++ DS G +VQAGCK   R  +   +E   I+E L    L+   S  + L VE+D L ++R L  E       +  + DI+ 
Subjt:  INSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIED

Query:  LAARAGVFSFVKCPRAGNQVVHSLAS
        L  +     F+  PR  N+  H + +
Subjt:  LAARAGVFSFVKCPRAGNQVVHSLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.1e-0528.23Show/hide
Query:  NSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIEDL
        N+DA+W       G+GWI+ + SG ++  G + L R  N+   EL    E L  + L+        +I E+D   ++  LN + +     +  L DI+ L
Subjt:  NSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIEDL

Query:  AARAGVFSFVKCPRAGNQVVHSLA
                F   PR GN+V   +A
Subjt:  AARAGVFSFVKCPRAGNQVVHSLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTATTAATGCTCCCTACTATAAATTCGGATGCTTCTTGGAATGAAGTTGCGGGCGTTGGAGGAGTCGGCTGGATTATCCATGATTCTTCAGGATCTCTAGTCCA
AGCGGGGTGCAAATGGTTAAATCGGAAATGGAACATCAATTTACTGGAATTGGCAGTGATTAAGGAAGGATTATTCATTTCTTACCTTTCGACCGATCACTCTAGGAGTA
CTGCTTTGATCGTGGAAGCTGATGTCCTAGATGTAATGAGAGCTTTGAATTGTGAATGCGAGGACATTTCCGTAGCCAAGGCGTTTTTGCTCGATATTGAAGATTTGGCG
GCTAGAGCGGGAGTTTTCTCCTTTGTGAAATGCCCAAGAGCGGGCAATCAAGTGGTGCATTCCCTTGCGAGTGCAACAACGGGTCTCCCTCCGGTGTCTTCTCCGTCGTC
CATTGATGCCAATGAAGCAAAGCTGAAACTTCAAGTGGCGGCGACGAACAGATCTGAAAAGGTGACAGCGTCGCTGGGGCTGTTTGTCTTAAGATCTGAAATCGGAGAAG
GACGGTGGCGTGCGGATCTGTTACAGAAGAGAGAGAGAGGGCTGAGAGAGAGTGAGATTGAGGGAGAAAGAGACGAGAGAGAGAAAGTCGAGAGCTCACCGGCGGCGTGG
CGAAAGACGACAGTGGCGCAGAACAACGGCGTGCGGCGGACGTTATCAGCAGGCGGCGTCAACGTCGGCGGCAGGGGGAGATCCGAGAGGGAGTGGGAGCACGAGAGAGA
GAGTAGGCTAAGAGAACGAGAGAGAGAGAACTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTATTAATGCTCCCTACTATAAATTCGGATGCTTCTTGGAATGAAGTTGCGGGCGTTGGAGGAGTCGGCTGGATTATCCATGATTCTTCAGGATCTCTAGTCCA
AGCGGGGTGCAAATGGTTAAATCGGAAATGGAACATCAATTTACTGGAATTGGCAGTGATTAAGGAAGGATTATTCATTTCTTACCTTTCGACCGATCACTCTAGGAGTA
CTGCTTTGATCGTGGAAGCTGATGTCCTAGATGTAATGAGAGCTTTGAATTGTGAATGCGAGGACATTTCCGTAGCCAAGGCGTTTTTGCTCGATATTGAAGATTTGGCG
GCTAGAGCGGGAGTTTTCTCCTTTGTGAAATGCCCAAGAGCGGGCAATCAAGTGGTGCATTCCCTTGCGAGTGCAACAACGGGTCTCCCTCCGGTGTCTTCTCCGTCGTC
CATTGATGCCAATGAAGCAAAGCTGAAACTTCAAGTGGCGGCGACGAACAGATCTGAAAAGGTGACAGCGTCGCTGGGGCTGTTTGTCTTAAGATCTGAAATCGGAGAAG
GACGGTGGCGTGCGGATCTGTTACAGAAGAGAGAGAGAGGGCTGAGAGAGAGTGAGATTGAGGGAGAAAGAGACGAGAGAGAGAAAGTCGAGAGCTCACCGGCGGCGTGG
CGAAAGACGACAGTGGCGCAGAACAACGGCGTGCGGCGGACGTTATCAGCAGGCGGCGTCAACGTCGGCGGCAGGGGGAGATCCGAGAGGGAGTGGGAGCACGAGAGAGA
GAGTAGGCTAAGAGAACGAGAGAGAGAGAACTGGTGA
Protein sequenceShow/hide protein sequence
MTLLMLPTINSDASWNEVAGVGGVGWIIHDSSGSLVQAGCKWLNRKWNINLLELAVIKEGLFISYLSTDHSRSTALIVEADVLDVMRALNCECEDISVAKAFLLDIEDLA
ARAGVFSFVKCPRAGNQVVHSLASATTGLPPVSSPSSIDANEAKLKLQVAATNRSEKVTASLGLFVLRSEIGEGRWRADLLQKRERGLRESEIEGERDEREKVESSPAAW
RKTTVAQNNGVRRTLSAGGVNVGGRGRSEREWEHERESRLRERERENW