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Lag0041201 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041201
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr13:13624594..13629011
RNA-Seq ExpressionLag0041201
SyntenyLag0041201
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ06625.1 hypothetical protein Acr_18g0007950 [Actinidia rufa]2.1e-0451.79Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        +R R+F  GDLVLRRV  +TK+PNAG LGPTWEGP ++ K     T  +   NG++
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]5.5e-0551.79Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++KR F+EGDLVLR+VM NTKD  +GALGPTWEGP + +K     T  +  + G++
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

XP_030486931.1 uncharacterized protein LOC115703840 [Cannabis sativa]7.2e-0560Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISK
        +++R+F+ GDLVLRRV+ NTKDP AG LGP WEGP ++++
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISK

XP_038690528.1 uncharacterized protein LOC119989207 [Tripterygium wilfordii]3.8e-0653.57Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        +R R FREGD VLRRV +NT++ NAG LGP WEGP  I +  G+    +H+ NGE+
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

XP_038707960.1 uncharacterized protein LOC120003113 [Tripterygium wilfordii]3.8e-0653.57Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        +R R FREGD VLRRV +NT++ NAG LGP WEGP  I +  G+    +H+ NGE+
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

TrEMBL top hitse value%identityAlignment
A0A2N9FQI1 Ribonuclease H3.5e-0548.21Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++ R FR GDLVLR+VM NT+ PN G LGP WEGP ++S + G     +   +G+S
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

A0A2N9HBM5 Ribonuclease H3.5e-0548.21Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++ R FR GDLVLR+VM NT+ PN G LGP WEGP ++S + G     +   +G+S
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

A0A2N9HPS1 Ribonuclease H3.5e-0548.21Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++ R FR GDLVLR+VM NT+ PN G LGP WEGP ++S + G     +   +G+S
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

A0A2N9II90 Ribonuclease H3.5e-0548.21Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++ R FR GDLVLR+VM NT+ PN G LGP WEGP ++S + G     +   +G+S
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

A0A6J1DZU0 Ribonuclease H2.7e-0551.79Show/hide
Query:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES
        ++KR F+EGDLVLR+VM NTKD  +GALGPTWEGP + +K     T  +  + G++
Subjt:  MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAACGCACCTTTAGAGAGGGAGATTTGGTGTTGAGAAGGGTAATGCAGAACACCAAAGATCCCAATGCAGGGGCACTAGGCCCAACGTGGGAAGGACCTTCTCA
AATCAGCAAGAAGGGCGGGGACAACACAACACCGATCCACAAGCGCAACGGGGAGTCAAATACTGGGAGAAAGACAGACCGAATGAGTCGGGCCAAGGCCAAAAGGATCG
GGCCTTGGCCCGATCCTATGCTCGATCGAGGCCAACCATCGGCCCACATAAAGTGGGCCGAGTCGGCTCTCGTCCACCGGAGTTGCGTGTCTCGGTTTAACCCGCTTTCA
GCTCCCAAATTGACCCGAACAGCCTCAAGCAACAGAAAAGCCCTAGCAAAAGATACATGTGGCTTACACCACACCGTTGTGCAGCAGTTCTGGCTAGTTTTGCAAGCGTC
ACGTCTTCCCTGCCTTCAACAAATTCACTGCTGGTGTCACGTGAAGCAATCCACCTGCCCTTCACGTGACATCAACAATGAATTTGTAGAAGCTGGAGAAGACGTGACCT
GCAAGACCAGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCGCCTCCGATGCCTAAGTCAGGAAACTGAGCAGCTAGAGAATAGAGAAAGAAGTCCAGAATCG
AGTTTTCGGCCCCCTTCTTCGATGGCGAAGAGGGGGGCCGAGCGGAGGCAAACGGACTCGGCCCGTGCAAACGGGCCGAGTGGTCGGCCTCGGCCCAAGGCCGAGGTTGA
CCGTACGGGTCGGGCCACGTTGGCCCGACCCGTCGGTCTGGTCTCCCTCTGGGTCCTTTCCTGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCGTACGCTGTGGT
GGTCCAAAATTACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGGTGAGAGACTACAAAAGTGGTGCTGGTCGGCCCCTGGACCCCGACTCGCTGACCGGGGC
AGCGAGACCCCCGTACTAGGTCATTCGGAGTCCTTCATTTCAGGTGCTCGGGCCAGAGGAGGTGGTGAGGTAGACTCGTTGGTCCAGGCTCACATGGTCTCACTCTGGAT
GAGGCGAGGTAGACTCGGCAGTTCAGGCTTGCCTGATGTAAAGATGCTCAGGCTAGAAGAGGATAAACTGGACAAAGTAGAGTTGAGAGATTACAACAATGGCTCTGGTC
GGCCTCGGGAAGAGGCCGAGCACAGCAATCTTTCCCGTTTTGGGTTATCTGGTCGGCCTTGGGAAAAGACCGAGCACAACAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAACGCACCTTTAGAGAGGGAGATTTGGTGTTGAGAAGGGTAATGCAGAACACCAAAGATCCCAATGCAGGGGCACTAGGCCCAACGTGGGAAGGACCTTCTCA
AATCAGCAAGAAGGGCGGGGACAACACAACACCGATCCACAAGCGCAACGGGGAGTCAAATACTGGGAGAAAGACAGACCGAATGAGTCGGGCCAAGGCCAAAAGGATCG
GGCCTTGGCCCGATCCTATGCTCGATCGAGGCCAACCATCGGCCCACATAAAGTGGGCCGAGTCGGCTCTCGTCCACCGGAGTTGCGTGTCTCGGTTTAACCCGCTTTCA
GCTCCCAAATTGACCCGAACAGCCTCAAGCAACAGAAAAGCCCTAGCAAAAGATACATGTGGCTTACACCACACCGTTGTGCAGCAGTTCTGGCTAGTTTTGCAAGCGTC
ACGTCTTCCCTGCCTTCAACAAATTCACTGCTGGTGTCACGTGAAGCAATCCACCTGCCCTTCACGTGACATCAACAATGAATTTGTAGAAGCTGGAGAAGACGTGACCT
GCAAGACCAGCAAGAATCGCTGGACACCGGTGTGGTGTAGGCCACACCGCCTCCGATGCCTAAGTCAGGAAACTGAGCAGCTAGAGAATAGAGAAAGAAGTCCAGAATCG
AGTTTTCGGCCCCCTTCTTCGATGGCGAAGAGGGGGGCCGAGCGGAGGCAAACGGACTCGGCCCGTGCAAACGGGCCGAGTGGTCGGCCTCGGCCCAAGGCCGAGGTTGA
CCGTACGGGTCGGGCCACGTTGGCCCGACCCGTCGGTCTGGTCTCCCTCTGGGTCCTTTCCTGGTCCTATCTCCTCCCGGTTGTCCTGTCAGCTCCTCGTACGCTGTGGT
GGTCCAAAATTACCTATAACATTAAGCCCCCACTCTTGAATTGGGATTCAGGTGAGAGACTACAAAAGTGGTGCTGGTCGGCCCCTGGACCCCGACTCGCTGACCGGGGC
AGCGAGACCCCCGTACTAGGTCATTCGGAGTCCTTCATTTCAGGTGCTCGGGCCAGAGGAGGTGGTGAGGTAGACTCGTTGGTCCAGGCTCACATGGTCTCACTCTGGAT
GAGGCGAGGTAGACTCGGCAGTTCAGGCTTGCCTGATGTAAAGATGCTCAGGCTAGAAGAGGATAAACTGGACAAAGTAGAGTTGAGAGATTACAACAATGGCTCTGGTC
GGCCTCGGGAAGAGGCCGAGCACAGCAATCTTTCCCGTTTTGGGTTATCTGGTCGGCCTTGGGAAAAGACCGAGCACAACAGCTAA
Protein sequenceShow/hide protein sequence
MRKRTFREGDLVLRRVMQNTKDPNAGALGPTWEGPSQISKKGGDNTTPIHKRNGESNTGRKTDRMSRAKAKRIGPWPDPMLDRGQPSAHIKWAESALVHRSCVSRFNPLS
APKLTRTASSNRKALAKDTCGLHHTVVQQFWLVLQASRLPCLQQIHCWCHVKQSTCPSRDINNEFVEAGEDVTCKTSKNRWTPVWCRPHRLRCLSQETEQLENRERSPES
SFRPPSSMAKRGAERRQTDSARANGPSGRPRPKAEVDRTGRATLARPVGLVSLWVLSWSYLLPVVLSAPRTLWWSKITYNIKPPLLNWDSGERLQKWCWSAPGPRLADRG
SETPVLGHSESFISGARARGGGEVDSLVQAHMVSLWMRRGRLGSSGLPDVKMLRLEEDKLDKVELRDYNNGSGRPREEAEHSNLSRFGLSGRPWEKTEHNS