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Lag0041202 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041202
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:13657507..13663345
RNA-Seq ExpressionLag0041202
SyntenyLag0041202
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]4.0e-0424.61Show/hide
Query:  DELEWDQFEEWVVLLWAIWYMRNE--MRQKKKVSIANLADWLVGYLNAFRDS--------------GR--------------------------REMD-L
        D ++W   EE  V LWAIW  RN+          + N+ DW+  YL  ++ +              GR                            +D L
Subjt:  DELEWDQFEEWVVLLWAIWYMRNE--MRQKKKVSIANLADWLVGYLNAFRDS--------------GR--------------------------REMD-L

Query:  LGERPIRVGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWFVDDSFTF
        + +  + V  +      +  D   AE L    G+ LA+E    PF +E DS +VF LL+ D E+ SE+ +L    +R  ++   +   F+F
Subjt:  LGERPIRVGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWFVDDSFTF

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]9.2e-0928.64Show/hide
Query:  LLRDVKDELEWDQFEEWVVLLWAIWYMRNE-MRQKKKVSIANLADWLVGYLNAFR--------------------------------------------D
        +LRD +D L W  FEE VV LW++W  RN  +  K++V   +LA W+  Y+  F+                                            D
Subjt:  LLRDVKDELEWDQFEEWVVLLWAIWYMRNE-MRQKKKVSIANLADWLVGYLNAFR--------------------------------------------D

Query:  SGRREMDL---LGERPIR-----VGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF
        +    +D    LG   IR     V  + T   E+    D AE L  V GLR+A+ET   P  LE DS+R++ L  RD E +S+   ++E V         
Subjt:  SGRREMDL---LGERPIR-----VGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF

Query:  VDDSFTFREAHAV
        V  SFT R  + +
Subjt:  VDDSFTFREAHAV

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]2.3e-0427.41Show/hide
Query:  DELEWDQFEEWVVLLWAIWYMRNEMRQKKKV--SIANLADWLVGYLNAFRDSGRREMD-LLGERPIRVG-------------------------------
        D + W      VVLLWAIW  RN+  Q   +  S+++L  W   YL  ++ + R     L+  RP RV                                
Subjt:  DELEWDQFEEWVVLLWAIWYMRNEMRQKKKV--SIANLADWLVGYLNAFRDSGRREMD-LLGERPIRVG-------------------------------

Query:  -------FATTVS-HENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF--VDDSFTFREAHA
               + T +     + D D+ EG  +  G+ LAVE     F +E DS+R+F LL  D  + SE+ +L   V++  L+     V  SFT R  +A
Subjt:  -------FATTVS-HENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF--VDDSFTFREAHA

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077751.9e-0424.61Show/hide
Query:  DELEWDQFEEWVVLLWAIWYMRNE--MRQKKKVSIANLADWLVGYLNAFRDS--------------GR--------------------------REMD-L
        D ++W   EE  V LWAIW  RN+          + N+ DW+  YL  ++ +              GR                            +D L
Subjt:  DELEWDQFEEWVVLLWAIWYMRNE--MRQKKKVSIANLADWLVGYLNAFRDS--------------GR--------------------------REMD-L

Query:  LGERPIRVGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWFVDDSFTF
        + +  + V  +      +  D   AE L    G+ LA+E    PF +E DS +VF LL+ D E+ SE+ +L    +R  ++   +   F+F
Subjt:  LGERPIRVGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWFVDDSFTF

A0A6J1CDQ4 uncharacterized protein LOC1110105334.4e-0928.64Show/hide
Query:  LLRDVKDELEWDQFEEWVVLLWAIWYMRNE-MRQKKKVSIANLADWLVGYLNAFR--------------------------------------------D
        +LRD +D L W  FEE VV LW++W  RN  +  K++V   +LA W+  Y+  F+                                            D
Subjt:  LLRDVKDELEWDQFEEWVVLLWAIWYMRNE-MRQKKKVSIANLADWLVGYLNAFR--------------------------------------------D

Query:  SGRREMDL---LGERPIR-----VGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF
        +    +D    LG   IR     V  + T   E+    D AE L  V GLR+A+ET   P  LE DS+R++ L  RD E +S+   ++E V         
Subjt:  SGRREMDL---LGERPIR-----VGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF

Query:  VDDSFTFREAHAV
        V  SFT R  + +
Subjt:  VDDSFTFREAHAV

A0A6J1DBJ7 uncharacterized protein LOC1110189731.1e-0427.41Show/hide
Query:  DELEWDQFEEWVVLLWAIWYMRNEMRQKKKV--SIANLADWLVGYLNAFRDSGRREMD-LLGERPIRVG-------------------------------
        D + W      VVLLWAIW  RN+  Q   +  S+++L  W   YL  ++ + R     L+  RP RV                                
Subjt:  DELEWDQFEEWVVLLWAIWYMRNEMRQKKKV--SIANLADWLVGYLNAFRDSGRREMD-LLGERPIRVG-------------------------------

Query:  -------FATTVS-HENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF--VDDSFTFREAHA
               + T +     + D D+ EG  +  G+ LAVE     F +E DS+R+F LL  D  + SE+ +L   V++  L+     V  SFT R  +A
Subjt:  -------FATTVS-HENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVVRGALAGWF--VDDSFTFREAHA

A0A803PWX1 Uncharacterized protein7.8e-0623.53Show/hide
Query:  ESSLHMFWHRKHTKEIMWSAGF-GAILSKCKADNIKFLLRDVKDELEWDQFEEWVVLLWAIWYMRNEMRQ-KKKVSIANLADWLVGYLNAFRDS------
        E+  H  W  +  +E+   AGF G +  + + D + FL+R V      D+FE +++L W +WY+RN +     K   + + DW   +L+ FR++      
Subjt:  ESSLHMFWHRKHTKEIMWSAGF-GAILSKCKADNIKFLLRDVKDELEWDQFEEWVVLLWAIWYMRNEMRQ-KKKVSIANLADWLVGYLNAFRDS------

Query:  GRREMDLLGERPIRVGFATTVSHENSRDADFA---------EGLVIVA---------------------GLRLAVETDTRPFALEVDSMRVFKLLQRDVE
        G+R  +     P R  F   V        + A         EG V+VA                     G++  ++ +   F++E D ++   L+ ++ E
Subjt:  GRREMDLLGERPIRVGFATTVSHENSRDADFA---------EGLVIVA---------------------GLRLAVETDTRPFALEVDSMRVFKLLQRDVE

Query:  EVSELEMLVEEV----VRGALAGWFVDDSFTFREAHAV
           +++ L+ ++        +AG F    F FREA+ V
Subjt:  EVSELEMLVEEV----VRGALAGWFVDDSFTFREAHAV

A0A803Q3X2 Uncharacterized protein5.4e-0722.75Show/hide
Query:  ESSLHMFWHRKHTKEIMWSAGFGAILSKCKADNIKFLLRDVKDELEWDQFEEWVVLLWAIWYMRNEMRQKKKVSIA-NLADWLVGYLNAFRDSGRREMDL
        E+++H  W  K +KE    +G    + + K +++   L  +  + + D+FE ++VL W IW +RN +       +A  + DW   YL  F+  G   M  
Subjt:  ESSLHMFWHRKHTKEIMWSAGFGAILSKCKADNIKFLLRDVKDELEWDQFEEWVVLLWAIWYMRNEMRQKKKVSIA-NLADWLVGYLNAFRDSGRREMDL

Query:  ------------LGERPIRV-----------GFATTVSHENSRDADFAEGLV-------------IVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEE
                    LG+  I V           G    V     R    +  +V             I+ GL++ ++     F++E + ++  +L+QR  E 
Subjt:  ------------LGERPIRV-----------GFATTVSHENSRDADFAEGLV-------------IVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEE

Query:  VSELEMLVEEVVRGALAGWFVDDSFTFREAHAV
          +++ L++++    L       SF FREA+ V
Subjt:  VSELEMLVEEVVRGALAGWFVDDSFTFREAHAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGGTTTGTTTTCGGCGTCGGAACCACCGCCAGCAGTCATCGACAACGACAACCCACGCCGCCGGTGAGCTGATTCCAACACGCACCCACGCTGGTGACTGTTG
CAATACCCACGTCGGCGACTCTAACAGACCCCGAGCCGAGACTCACGAGTCTCTAAACAGAAAACCCATAGCTGCTACACTTCGAGACCCACGCAACACTCTCTCTCTCT
CGCTCGCTCGTCTTCTCCGTCAGCAACCAGAGACCCGCGAGTCTCCGTTCGTTCTCACTCCCTCGCGTCTCCTCTTCACCGAAAAGTCGATCTTCCTCCGTCTTCTTCGT
TCTCTTCTCTTTTCAACTCGAGTAGCTAGATCTTGCCGCAATTTAGTCCACGCCCATCGAGTTCAAACCCACGCCCAAATCTCGCTGGAAAGGGGTTTCAGAAAGATGGT
GAGAGAAAGAAGGAGACAGATGGGCGAGTCGAGTCTTCATATGTTCTGGCATCGTAAGCATACGAAGGAGATTATGTGGTCTGCAGGTTTTGGAGCTATTTTGTCCAAAT
GCAAGGCAGACAATATTAAGTTCCTCCTTCGAGACGTAAAGGATGAGTTGGAGTGGGATCAGTTTGAGGAATGGGTGGTGTTATTGTGGGCGATCTGGTACATGCGGAAT
GAAATGAGGCAGAAGAAGAAGGTCTCAATTGCGAATCTGGCAGATTGGTTGGTCGGGTATCTAAACGCGTTCCGTGATTCGGGGAGGAGGGAGATGGATCTGTTGGGGGA
AAGACCTATTCGGGTGGGCTTCGCAACTACGGTTTCTCACGAGAACAGTAGAGATGCTGACTTTGCAGAAGGATTGGTGATTGTTGCCGGTCTGAGACTTGCTGTGGAGA
CGGATACTCGACCTTTTGCACTGGAGGTAGATTCTATGCGGGTGTTCAAGCTGCTGCAGCGTGATGTGGAGGAGGTGTCGGAGTTGGAGATGTTGGTGGAGGAGGTGGTG
AGGGGCGCTTTAGCGGGGTGGTTTGTTGACGACAGCTTTACATTCAGGGAAGCCCACGCCGTAGACGTTGCTGTCTCTATCTCCCTCGGGTTCTTTCCTGTCCAGCACCC
AGATCCACGCGGTTCCAGCACTTGTACGTCTGGTAAATTGATCCCTAATGCTTGGAAGTTTCCCAATGGTAGGTTCAGACTCATTCCACCGCTTCTAGCTTGGATCGAAG
TCTTTTTGGTGCCTCGGATAAAAATGGTCAAGGGGTGGTATGTCACCAATGGATTAAGAGGAGCATCGGGTGCCTTGGGTAATATGGTCAAGGGTCGAACGCAGAGCGCC
GTAGAGAAACGTCGAGGCCCTGGCTCAAGAATCCTCAATTCTGCCTTTTTCGGCTCCAAAGGTCCCAAATCGAAGTCCCTCAAACCTAGCCGAAAAGAAGCTTATATAGC
TGATTTTTCGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGGTTTGTTTTCGGCGTCGGAACCACCGCCAGCAGTCATCGACAACGACAACCCACGCCGCCGGTGAGCTGATTCCAACACGCACCCACGCTGGTGACTGTTG
CAATACCCACGTCGGCGACTCTAACAGACCCCGAGCCGAGACTCACGAGTCTCTAAACAGAAAACCCATAGCTGCTACACTTCGAGACCCACGCAACACTCTCTCTCTCT
CGCTCGCTCGTCTTCTCCGTCAGCAACCAGAGACCCGCGAGTCTCCGTTCGTTCTCACTCCCTCGCGTCTCCTCTTCACCGAAAAGTCGATCTTCCTCCGTCTTCTTCGT
TCTCTTCTCTTTTCAACTCGAGTAGCTAGATCTTGCCGCAATTTAGTCCACGCCCATCGAGTTCAAACCCACGCCCAAATCTCGCTGGAAAGGGGTTTCAGAAAGATGGT
GAGAGAAAGAAGGAGACAGATGGGCGAGTCGAGTCTTCATATGTTCTGGCATCGTAAGCATACGAAGGAGATTATGTGGTCTGCAGGTTTTGGAGCTATTTTGTCCAAAT
GCAAGGCAGACAATATTAAGTTCCTCCTTCGAGACGTAAAGGATGAGTTGGAGTGGGATCAGTTTGAGGAATGGGTGGTGTTATTGTGGGCGATCTGGTACATGCGGAAT
GAAATGAGGCAGAAGAAGAAGGTCTCAATTGCGAATCTGGCAGATTGGTTGGTCGGGTATCTAAACGCGTTCCGTGATTCGGGGAGGAGGGAGATGGATCTGTTGGGGGA
AAGACCTATTCGGGTGGGCTTCGCAACTACGGTTTCTCACGAGAACAGTAGAGATGCTGACTTTGCAGAAGGATTGGTGATTGTTGCCGGTCTGAGACTTGCTGTGGAGA
CGGATACTCGACCTTTTGCACTGGAGGTAGATTCTATGCGGGTGTTCAAGCTGCTGCAGCGTGATGTGGAGGAGGTGTCGGAGTTGGAGATGTTGGTGGAGGAGGTGGTG
AGGGGCGCTTTAGCGGGGTGGTTTGTTGACGACAGCTTTACATTCAGGGAAGCCCACGCCGTAGACGTTGCTGTCTCTATCTCCCTCGGGTTCTTTCCTGTCCAGCACCC
AGATCCACGCGGTTCCAGCACTTGTACGTCTGGTAAATTGATCCCTAATGCTTGGAAGTTTCCCAATGGTAGGTTCAGACTCATTCCACCGCTTCTAGCTTGGATCGAAG
TCTTTTTGGTGCCTCGGATAAAAATGGTCAAGGGGTGGTATGTCACCAATGGATTAAGAGGAGCATCGGGTGCCTTGGGTAATATGGTCAAGGGTCGAACGCAGAGCGCC
GTAGAGAAACGTCGAGGCCCTGGCTCAAGAATCCTCAATTCTGCCTTTTTCGGCTCCAAAGGTCCCAAATCGAAGTCCCTCAAACCTAGCCGAAAAGAAGCTTATATAGC
TGATTTTTCGTCTTAG
Protein sequenceShow/hide protein sequence
MKEVCFRRRNHRQQSSTTTTHAAGELIPTRTHAGDCCNTHVGDSNRPRAETHESLNRKPIAATLRDPRNTLSLSLARLLRQQPETRESPFVLTPSRLLFTEKSIFLRLLR
SLLFSTRVARSCRNLVHAHRVQTHAQISLERGFRKMVRERRRQMGESSLHMFWHRKHTKEIMWSAGFGAILSKCKADNIKFLLRDVKDELEWDQFEEWVVLLWAIWYMRN
EMRQKKKVSIANLADWLVGYLNAFRDSGRREMDLLGERPIRVGFATTVSHENSRDADFAEGLVIVAGLRLAVETDTRPFALEVDSMRVFKLLQRDVEEVSELEMLVEEVV
RGALAGWFVDDSFTFREAHAVDVAVSISLGFFPVQHPDPRGSSTCTSGKLIPNAWKFPNGRFRLIPPLLAWIEVFLVPRIKMVKGWYVTNGLRGASGALGNMVKGRTQSA
VEKRRGPGSRILNSAFFGSKGPKSKSLKPSRKEAYIADFSS