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Lag0041251 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041251
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr13:14410593..14410946
RNA-Seq ExpressionLag0041251
SyntenyLag0041251
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]3.8e-1753.26Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG
        CGK GHS LVCY+RF+KE+S  LV ++   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG

TYJ96768.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.3e-1650Show/hide
Query:  AKCGKLGHSTLVCYHRFDKEY--SLVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEY
        A CGK GHS LVCY+RF+KE+   LV ++    G   N +   +PT  +  QS N F    +TV+DPNWY+DSGA+NHVT +Y+N+ NP EY
Subjt:  AKCGKLGHSTLVCYHRFDKEY--SLVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEY

TYJ99887.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.6e-1544.33Show/hide
Query:  CGKLGHSTLVCYHRFDKEYSLVHNKGNGNGTPQN--RNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT
        CGK+GH+  +CY+RF+K++     K +  GT  N   NN +  T F+ +   NPF V  E  VD NWY ++ A NH+T DY N+ NP+EYGG  +VT
Subjt:  CGKLGHSTLVCYHRFDKEYSLVHNKGNGNGTPQN--RNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.8e-1954.64Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT
        CGK GHS LVCY+RF+KE+S  LV N+   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G E+VT
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]1.0e-1754.35Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG
        CGK GHS LVCY+RF+KE+S  LV N+   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X18.8e-2054.64Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT
        CGK GHS LVCY+RF+KE+S  LV N+   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G E+VT
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X34.8e-1854.35Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG
        CGK GHS LVCY+RF+KE+S  LV N+   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG

A0A5A7SIT7 Uncharacterized protein1.8e-1753.26Show/hide
Query:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG
        CGK GHS LVCY+RF+KE+S  LV ++   N    N + S +P  F++ Q+  PF   P+TVVDPNWY+DSGA+NHVTR+ +N+ NP EY G
Subjt:  CGKLGHSTLVCYHRFDKEYS--LVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGG

A0A5D3BEZ6 Putative mitochondrial protein4.5e-1650Show/hide
Query:  AKCGKLGHSTLVCYHRFDKEY--SLVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEY
        A CGK GHS LVCY+RF+KE+   LV ++    G   N +   +PT  +  QS N F    +TV+DPNWY+DSGA+NHVT +Y+N+ NP EY
Subjt:  AKCGKLGHSTLVCYHRFDKEY--SLVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEY

A0A5D3BL83 Retrovirus-related Pol polyprotein from transposon TNT 1-947.7e-1644.33Show/hide
Query:  CGKLGHSTLVCYHRFDKEYSLVHNKGNGNGTPQN--RNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT
        CGK+GH+  +CY+RF+K++     K +  GT  N   NN +  T F+ +   NPF V  E  VD NWY ++ A NH+T DY N+ NP+EYGG  +VT
Subjt:  CGKLGHSTLVCYHRFDKEYSLVHNKGNGNGTPQN--RNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEYGGTERVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTCATGGGAGGGGCAGAGGCCAAGGTTTTGGAAATTATAACAACCGTCCCACGTGCCAAGTGTGGTAAGCTTGGACACTCAACCCTTGTTTGCTATCATCGGTT
TGATAAAGAGTATTCTCTTGTTCATAACAAAGGCAATGGAAATGGTACACCTCAAAACAGAAACAATTCCCGGTCACCTACGACATTCTTAGCTAATCAAAGTACTAATC
CCTTTCTGGTTGGACCTGAGACCGTAGTTGATCCTAATTGGTACGTTGATAGCGGAGCCTCCAACCATGTCACCAGAGACTACAATAATGTGGGCAACCCAATTGAATAT
GGAGGTACAGAACGTGTGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTCATGGGAGGGGCAGAGGCCAAGGTTTTGGAAATTATAACAACCGTCCCACGTGCCAAGTGTGGTAAGCTTGGACACTCAACCCTTGTTTGCTATCATCGGTT
TGATAAAGAGTATTCTCTTGTTCATAACAAAGGCAATGGAAATGGTACACCTCAAAACAGAAACAATTCCCGGTCACCTACGACATTCTTAGCTAATCAAAGTACTAATC
CCTTTCTGGTTGGACCTGAGACCGTAGTTGATCCTAATTGGTACGTTGATAGCGGAGCCTCCAACCATGTCACCAGAGACTACAATAATGTGGGCAACCCAATTGAATAT
GGAGGTACAGAACGTGTGACATGA
Protein sequenceShow/hide protein sequence
MVVMGGAEAKVLEIITTVPRAKCGKLGHSTLVCYHRFDKEYSLVHNKGNGNGTPQNRNNSRSPTTFLANQSTNPFLVGPETVVDPNWYVDSGASNHVTRDYNNVGNPIEY
GGTERVT