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Lag0041266 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041266
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:14759780..14760154
RNA-Seq ExpressionLag0041266
SyntenyLag0041266
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0548.84Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNL-SRNQNANPNIGRGRGIPGKNGRGRGKSPFPSNFGRGRG
        MRT +  V+FEELHVLL +++S +AKQ +RDD    PTAL A++Q+L S     N N  RGRG     G G G S F +  GRG G
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNL-SRNQNANPNIGRGRGIPGKNGRGRGKSPFPSNFGRGRG

KAG7015254.1 hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-0548.84Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNL-SRNQNANPNIGRGRGIPGKNGRGRGKSPFPSNFGRGRG
        MRT +  V+FEELHVLL +++S +AKQ +RDD    PTAL A++Q+L S     N N  RGRG     G G G S F +  GRG G
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNL-SRNQNANPNIGRGRGIPGKNGRGRGKSPFPSNFGRGRG

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]9.9e-0848.84Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANA-QNLSRNQNANPNIGRGRGIPGKNGRGRGK-SPFPSNFGRGR
        MRT AQSVSFEELHV + S++S I KQ++R+D    P ALFA++ Q+ +R    +PN    RG    NGRG+   +P  +N GRGR
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANA-QNLSRNQNANPNIGRGRGIPGKNGRGRGK-SPFPSNFGRGR

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]3.8e-0745.83Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNLSRNQNANPNIGRGRGIPGKNGRGRGKSPFPSN----------FGRGRGF
        M T +QSVSFEEL+VLLV +++ I KQ + D+ F   + L AN    ++ QN+NPNI R RG    NG G+GK P P+N           GR RGF
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNLSRNQNANPNIGRGRGIPGKNGRGRGKSPFPSN----------FGRGRGF

TrEMBL top hitse value%identityAlignment
A0A6J1D9L6 uncharacterized protein LOC1110188924.8e-0848.84Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANA-QNLSRNQNANPNIGRGRGIPGKNGRGRGK-SPFPSNFGRGR
        MRT AQSVSFEELHV + S++S I KQ++R+D    P ALFA++ Q+ +R    +PN    RG    NGRG+   +P  +N GRGR
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANA-QNLSRNQNANPNIGRGRGIPGKNGRGRGK-SPFPSNFGRGR

A0A6J1DYF1 uncharacterized protein LOC1110257091.8e-0745.83Show/hide
Query:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNLSRNQNANPNIGRGRGIPGKNGRGRGKSPFPSN----------FGRGRGF
        M T +QSVSFEEL+VLLV +++ I KQ + D+ F   + L AN    ++ QN+NPNI R RG    NG G+GK P P+N           GR RGF
Subjt:  MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNLSRNQNANPNIGRGRGIPGKNGRGRGKSPFPSN----------FGRGRGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACTCATGCTCAATCGGTTTCTTTTGAAGAACTTCATGTTCTCTTAGTCTCTAAGCAATCTACAATTGCCAAACAGATCCAGCGTGATGATGCTTTTGCATCTCC
TACTGCTCTTTTTGCTAATGCACAAAATCTTAGTCGCAATCAGAATGCTAACCCCAACATTGGCCGTGGTCGTGGAATTCCTGGTAAGAATGGTCGTGGTCGCGGTAAGT
CTCCTTTTCCTAGTAATTTTGGTCGTGGTCGTGGCTTCTTTCCCCTGGATCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATCGTCCGGTATGTCAGATTT
GCCAAAAGTCTGGCCATACTGCTCTTGATTGTTTCAACAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAACTCATGCTCAATCGGTTTCTTTTGAAGAACTTCATGTTCTCTTAGTCTCTAAGCAATCTACAATTGCCAAACAGATCCAGCGTGATGATGCTTTTGCATCTCC
TACTGCTCTTTTTGCTAATGCACAAAATCTTAGTCGCAATCAGAATGCTAACCCCAACATTGGCCGTGGTCGTGGAATTCCTGGTAAGAATGGTCGTGGTCGCGGTAAGT
CTCCTTTTCCTAGTAATTTTGGTCGTGGTCGTGGCTTCTTTCCCCTGGATCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATCGTCCGGTATGTCAGATTT
GCCAAAAGTCTGGCCATACTGCTCTTGATTGTTTCAACAGGATGA
Protein sequenceShow/hide protein sequence
MRTHAQSVSFEELHVLLVSKQSTIAKQIQRDDAFASPTALFANAQNLSRNQNANPNIGRGRGIPGKNGRGRGKSPFPSNFGRGRGFFPLDLDLLLLKLRIFHLIVRYVRF
AKSLAILLLIVSTG