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Lag0041269 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041269
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationchr13:14795735..14796106
RNA-Seq ExpressionLag0041269
SyntenyLag0041269
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]8.0e-1839.02Show/hide
Query:  WGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSNCWI-WHYDKYGSYT
        +GLDLLKKG+  +VG+G S  + RDPW+PR HS + +  K +C    V + I   G WD+PK+ Q+ +  D + I+ I IS      +I WH DK G ++
Subjt:  WGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSNCWI-WHYDKYGSYT

Query:  VKNGYKLG--MILAKEASTSDSN
        V++ Y+L   ++  +E+S+S +N
Subjt:  VKNGYKLG--MILAKEASTSDSN

CAB4282349.1 unnamed protein product [Prunus armeniaca]7.3e-1941.03Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY
        +WG +LL  GL +++GDG+ T+V  D WIPRP+ F+ +  ++   E KV   I   G+W++  L    + EDV+ I  IP+S+   N  WIWHY   G Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
         VK+GY+L +   KE S
Subjt:  TVKNGYKLGMILAKEAS

CAB4312759.1 unnamed protein product [Prunus armeniaca]1.6e-1841.03Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY
        +WG +LL  GL +++GDG+ T+V  D WIPRP+ F+ +  K+   E KV   I   G+W++  L    + E V+ I  IP+S+   N  WIWHY   G Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
         VK+GY+L +   KE S
Subjt:  TVKNGYKLGMILAKEAS

XP_021801569.1 uncharacterized protein LOC110745747 isoform X1 [Prunus avium]1.5e-1941.88Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY
        +WG +LL  GL + +GDG+ T+V  D WIP P+SF+ +  ++   E KV + I   G+W++  L     EEDV+ I  IP+S+    + WIWHY   G+Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
        +VK+GY+L M   KE S
Subjt:  TVKNGYKLGMILAKEAS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.6e-1938.52Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPI-SMTMSNCWIWHYDKYGSY
        +WG DLL KGL  +VG+G +     DPW+PRP +FK +       +  V   I   G+WD+  +      ED   I+ +PI S  + + W+WHYDK G+Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPI-SMTMSNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEASTSDSN
        +V++GYKL M L   A+++ +N
Subjt:  TVKNGYKLGMILAKEASTSDSN

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248742.7e-1938.52Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPI-SMTMSNCWIWHYDKYGSY
        +WG DLL KGL  +VG+G +     DPW+PRP +FK +       +  V   I   G+WD+  +      ED   I+ +PI S  + + W+WHYDK G+Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPI-SMTMSNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEASTSDSN
        +V++GYKL M L   A+++ +N
Subjt:  TVKNGYKLGMILAKEASTSDSN

A0A6J5V068 Uncharacterized protein3.5e-1941.03Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY
        +WG +LL  GL +++GDG+ T+V  D WIPRP+ F+ +  ++   E KV   I   G+W++  L    + EDV+ I  IP+S+   N  WIWHY   G Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSN-CWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
         VK+GY+L +   KE S
Subjt:  TVKNGYKLGMILAKEAS

A0A6P5RF81 uncharacterized protein LOC110745747 isoform X17.1e-2041.88Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY
        +WG +LL  GL + +GDG+ T+V  D WIP P+SF+ +  ++   E KV + I   G+W++  L     EEDV+ I  IP+S+    + WIWHY   G+Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
        +VK+GY+L M   KE S
Subjt:  TVKNGYKLGMILAKEAS

M5VP36 Uncharacterized protein (Fragment)4.6e-1940.17Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY
        +WG +LL  GL +++GDG+ T+V  D WIPRP+SF++V  ++   E KV + I  +G W++  L    +E DV+ I  IP+S+    + W+WHY   G Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
        +VK+GY+L +   K+ S
Subjt:  TVKNGYKLGMILAKEAS

M5XJH9 Uncharacterized protein (Fragment)2.4e-2041.88Show/hide
Query:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY
        +WG +LL  GL +++GDG+ T+V  D WIPRP+SF+ +  ++   E KV + I   G+W++  L    +EEDV+ I  IP+S+    + W+WHY   G Y
Subjt:  MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTM-SNCWIWHYDKYGSY

Query:  TVKNGYKLGMILAKEAS
        +VK+GY+L M   KE S
Subjt:  TVKNGYKLGMILAKEAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGGCTGGATCTATTGAAAAAAGGCCTTGGAAGGCAGGTTGGGGATGGAAGATCTACTATGGTGATGAGGGATCCTTGGATACCTCGCCCCCATTCTTTTAAAGT
TGTTGGAGTTAAAATAGATTGTGGTGAGATGAAAGTAGGAGAATGTATTTTGTTGTCTGGTCATTGGGATATTCCTAAGCTACAACAGTTCCTATATGAGGAAGATGTTC
AGGAAATAATAAGGATCCCTATCAGTATGACGATGTCGAATTGCTGGATATGGCATTATGATAAGTACGGGAGTTATACTGTTAAGAACGGTTATAAATTGGGAATGATT
TTGGCTAAGGAGGCTTCAACCTCGGATTCTAATATCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGGCTGGATCTATTGAAAAAAGGCCTTGGAAGGCAGGTTGGGGATGGAAGATCTACTATGGTGATGAGGGATCCTTGGATACCTCGCCCCCATTCTTTTAAAGT
TGTTGGAGTTAAAATAGATTGTGGTGAGATGAAAGTAGGAGAATGTATTTTGTTGTCTGGTCATTGGGATATTCCTAAGCTACAACAGTTCCTATATGAGGAAGATGTTC
AGGAAATAATAAGGATCCCTATCAGTATGACGATGTCGAATTGCTGGATATGGCATTATGATAAGTACGGGAGTTATACTGTTAAGAACGGTTATAAATTGGGAATGATT
TTGGCTAAGGAGGCTTCAACCTCGGATTCTAATATCTACTGA
Protein sequenceShow/hide protein sequence
MWGLDLLKKGLGRQVGDGRSTMVMRDPWIPRPHSFKVVGVKIDCGEMKVGECILLSGHWDIPKLQQFLYEEDVQEIIRIPISMTMSNCWIWHYDKYGSYTVKNGYKLGMI
LAKEASTSDSNIY