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Lag0041270 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041270
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr13:14806997..14807783
RNA-Seq ExpressionLag0041270
SyntenyLag0041270
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYR19083.1 hypothetical protein Ahy_B03g063764 [Arachis hypogaea]3.8e-0533.66Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCY-TTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL
        +A A   GL  +  C   KV + SD++ ++   L Q++C   C+ T I+D   L   F   +  HV R+ NR+AH+LA + +  PN +W ++ P  V  L
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCY-TTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL

Query:  A
        A
Subjt:  A

RYR47414.1 hypothetical protein Ahy_A07g033342 [Arachis hypogaea]1.0e-0533.66Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTT-ISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL
        +A+A L GL+ + +C    + V SD++ +I + L +K+ Q++ ++T I D   L  +F   +  HV R  NR+AH+LA + +  PN+VW +  P+ +  L
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTT-ISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL

Query:  A
        A
Subjt:  A

TXG71894.1 hypothetical protein EZV62_000473 [Acer yangbiense]5.9e-0630.7Show/hide
Query:  SGRLIQSLEKAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKN
        +GR    + +A  + EGL L+    ++ +++ SDSL ++     +   + D +  I DIQFL     KT + ++ R  NR+AH++AR  +   NSV   +
Subjt:  SGRLIQSLEKAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKN

Query:  -FPEWVIRLANSEL
         +P W+ +LA S++
Subjt:  -FPEWVIRLANSEL

XP_042962749.1 uncharacterized protein LOC122297028 [Carya illinoinensis]2.0e-0635.78Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPN-SVWSKNFPEWVIRL
        +A AVL GL+   Q  I K+ + SD L LI+ L    +C +D    I +I+ +R  FH+    HV R+ N +AH LAR   +  + SVW    P  V + 
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPN-SVWSKNFPEWVIRL

Query:  ANSELHYFV
        A  +   FV
Subjt:  ANSELHYFV

XP_042972859.1 uncharacterized protein LOC122304666 [Carya illinoinensis]6.5e-0536.08Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSV-WSKNFPEWV
        +A+A+L GL+L  Q  + K+ + SDSL L++ L    +C T+    + DI+ L   F +T L HV+R  N  AH LAR      + V W  + P +V
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSV-WSKNFPEWV

TrEMBL top hitse value%identityAlignment
A0A2N9EX83 Reverse transcriptase domain-containing protein3.7e-0633.94Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLAR--VGMHAPNSVWSKNFPEWVIR
        +A+A    L+L+    +  V V  DSL +I  L  Q +C       I DIQ L  +FH  + CHV R  N  AH LAR  + +H+   VW ++ P+++  
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLAR--VGMHAPNSVWSKNFPEWVIR

Query:  LANSELHYF
        +  +EL  F
Subjt:  LANSELHYF

A0A444ZXY6 RNase H domain-containing protein1.8e-0533.66Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCY-TTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL
        +A A   GL  +  C   KV + SD++ ++   L Q++C   C+ T I+D   L   F   +  HV R+ NR+AH+LA + +  PN +W ++ P  V  L
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCY-TTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL

Query:  A
        A
Subjt:  A

A0A445C8Y7 Uncharacterized protein4.8e-0633.66Show/hide
Query:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTT-ISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL
        +A+A L GL+ + +C    + V SD++ +I + L +K+ Q++ ++T I D   L  +F   +  HV R  NR+AH+LA + +  PN+VW +  P+ +  L
Subjt:  KAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTT-ISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRL

Query:  A
        A
Subjt:  A

A0A5C7IST2 RNase H domain-containing protein2.8e-0630.7Show/hide
Query:  SGRLIQSLEKAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKN
        +GR    + +A  + EGL L+    ++ +++ SDSL ++     +   + D +  I DIQFL     KT + ++ R  NR+AH++AR  +   NSV   +
Subjt:  SGRLIQSLEKAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKN

Query:  -FPEWVIRLANSEL
         +P W+ +LA S++
Subjt:  -FPEWVIRLANSEL

A0A6J1DX30 uncharacterized protein LOC1110248743.1e-0533.66Show/hide
Query:  VLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNS--VWSKNFPEWVIRLANS
        +LEGLK +A  N   + V SDSL  I  + ++   + D    + +IQ L   F      H +R+ NR AH LA+ G+ +P++   W  NFP W++ L   
Subjt:  VLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDIQFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNS--VWSKNFPEWVIRLANS

Query:  E
        +
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAGGACATTGGAACTCTGGGATTCTTCAGGAGCAGACCTTATATGGGATATCAAAGATCGATGGCTTTGTATTTTTAACAATGTTCCTTCACAAAAACTCGAG
CAGATATAATTACCTCGCCGAATACCAAAGGTTTAGTAATAAGAGTGGCCGTCTAATTCAATCCTTGGAAAAGGCGGTAGCGGTGCTGGAGGGACTTAAATTGTCAGCCC
AATGTAATATTGAGAAGGTGACGGTTTTTTCGGATTCCCTAACACTGATCTCTACTCTTCTTCATCAAAAACAGTGTCAGACGGATTGTTACACCACGATTTCGGATATC
CAATTTTTAAGGGAGGCCTTCCATAAGACTGATTTGTGCCATGTCAATCGAGAGCACAACAGGTTGGCTCACGATTTAGCTAGAGTAGGGATGCATGCTCCGAATTCAGT
TTGGAGTAAGAATTTTCCGGAGTGGGTTATTCGATTAGCTAATAGTGAGTTGCACTATTTTGTAATCTCGCAAGGGAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGAGGACATTGGAACTCTGGGATTCTTCAGGAGCAGACCTTATATGGGATATCAAAGATCGATGGCTTTGTATTTTTAACAATGTTCCTTCACAAAAACTCGAG
CAGATATAATTACCTCGCCGAATACCAAAGGTTTAGTAATAAGAGTGGCCGTCTAATTCAATCCTTGGAAAAGGCGGTAGCGGTGCTGGAGGGACTTAAATTGTCAGCCC
AATGTAATATTGAGAAGGTGACGGTTTTTTCGGATTCCCTAACACTGATCTCTACTCTTCTTCATCAAAAACAGTGTCAGACGGATTGTTACACCACGATTTCGGATATC
CAATTTTTAAGGGAGGCCTTCCATAAGACTGATTTGTGCCATGTCAATCGAGAGCACAACAGGTTGGCTCACGATTTAGCTAGAGTAGGGATGCATGCTCCGAATTCAGT
TTGGAGTAAGAATTTTCCGGAGTGGGTTATTCGATTAGCTAATAGTGAGTTGCACTATTTTGTAATCTCGCAAGGGAATCCTTAA
Protein sequenceShow/hide protein sequence
MYGGHWNSGILQEQTLYGISKIDGFVFLTMFLHKNSSRYNYLAEYQRFSNKSGRLIQSLEKAVAVLEGLKLSAQCNIEKVTVFSDSLTLISTLLHQKQCQTDCYTTISDI
QFLREAFHKTDLCHVNREHNRLAHDLARVGMHAPNSVWSKNFPEWVIRLANSELHYFVISQGNP