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Lag0041271 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041271
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionYcf3-interacting protein 1, chloroplastic
Genome locationchr13:14808113..14809184
RNA-Seq ExpressionLag0041271
SyntenyLag0041271
Gene Ontology termsGO:0009628 - response to abiotic stimulus (biological process)
GO:0048564 - photosystem I assembly (biological process)
GO:0080183 - response to photooxidative stress (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040340 - Chloroplast enhancing stress tolerance protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO68908.1 hypothetical protein CCACVL1_19773 [Corchorus capsularis]7.4e-1270Show/hide
Query:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE-------DPEVPVVVVCFL
        VE PKKKR KSLY KATDTGVDP+EAA+RLNIDWD  A+IE       D EVP  VVCFL
Subjt:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE-------DPEVPVVVVCFL

XP_008439416.1 PREDICTED: ycf3-interacting protein 1, chloroplastic isoform X2 [Cucumis melo]2.5e-1572.73Show/hide
Query:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVVVCFLGPSSKTLC
        EAPKK+RSKSLY KATDTGV+PREAAKRLNIDWDT A+IE      DPEVP  VVCFL PS  + C
Subjt:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVVVCFLGPSSKTLC

XP_010665471.1 PREDICTED: ycf3-interacting protein 1, chloroplastic isoform X2 [Vitis vinifera]9.7e-1281.25Show/hide
Query:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV
        L  VEAPKKK SKSLY KATDTGVDPREAAKRLN+DWD+ A+IEDP+V
Subjt:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV

XP_022762563.1 ycf3-interacting protein 1, chloroplastic isoform X1 [Durio zibethinus]8.7e-1364.71Show/hide
Query:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL
        VEAPKKKR KSLY KATDTG+DP+EAAKRLNIDWD+ A+IED       EVP  VVCF  P    L +
Subjt:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL

XP_022762565.1 ycf3-interacting protein 1, chloroplastic isoform X3 [Durio zibethinus]3.9e-1363.38Show/hide
Query:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL
        L  VEAPKKKR KSLY KATDTG+DP+EAAKRLNIDWD+ A+IED       EVP  VVCF  P    L +
Subjt:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL

TrEMBL top hitse value%identityAlignment
A0A0A0KJ48 Uncharacterized protein4.7e-1277.78Show/hide
Query:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVV
        EAPKKKRSKSLY KATDTGV+PREAAKRLNIDWDT A+IE      DPEVP  V
Subjt:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVV

A0A1R3HF75 Uncharacterized protein3.6e-1270Show/hide
Query:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE-------DPEVPVVVVCFL
        VE PKKKR KSLY KATDTGVDP+EAA+RLNIDWD  A+IE       D EVP  VVCFL
Subjt:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE-------DPEVPVVVVCFL

A0A1S3AYR1 ycf3-interacting protein 1, chloroplastic isoform X21.2e-1572.73Show/hide
Query:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVVVCFLGPSSKTLC
        EAPKK+RSKSLY KATDTGV+PREAAKRLNIDWDT A+IE      DPEVP  VVCFL PS  + C
Subjt:  EAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIE------DPEVPVVVVCFLGPSSKTLC

A0A6P6ACF8 ycf3-interacting protein 1, chloroplastic isoform X31.9e-1363.38Show/hide
Query:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL
        L  VEAPKKKR KSLY KATDTG+DP+EAAKRLNIDWD+ A+IED       EVP  VVCF  P    L +
Subjt:  LPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL

A0A6P6ACM3 ycf3-interacting protein 1, chloroplastic isoform X14.2e-1364.71Show/hide
Query:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL
        VEAPKKKR KSLY KATDTG+DP+EAAKRLNIDWD+ A+IED       EVP  VVCF  P    L +
Subjt:  VEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIED------PEVPVVVVCFLGPSSKTLCL

SwissProt top hitse value%identityAlignment
B8AAV3 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic4.7e-0965.22Show/hide
Query:  VEAPKKKR--SKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPE
        +EAPKKK    KS+Y KATDTG+DP  AAKRLNIDWD+ A ++D E
Subjt:  VEAPKKKR--SKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPE

E5KCJ8 Ycf3-interacting protein 1, chloroplastic3.9e-0858.49Show/hide
Query:  VEAPKK-KRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKI------EDPEVP
        VEA K+ K  +SLY KATDTG+DP+EAAKRL IDWD+ A+I      ++P+VP
Subjt:  VEAPKK-KRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKI------EDPEVP

Q5VQK9 Protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic4.7e-0965.22Show/hide
Query:  VEAPKKKR--SKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPE
        +EAPKKK    KS+Y KATDTG+DP  AAKRLNIDWD+ A ++D E
Subjt:  VEAPKKKR--SKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPE

Q9LU01 Ycf3-interacting protein 1, chloroplastic8.5e-1152.54Show/hide
Query:  HQETVYWGYTYLPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV
        H+E + W       VE  KK+R KS+Y K+TDTG+DP+EAAKRLN++WD+ A IE+ +V
Subjt:  HQETVYWGYTYLPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV

Arabidopsis top hitse value%identityAlignment
AT5G44650.1 Encodes a chloroplast protein that induces tolerance to multiple environmental stresses and reduces photooxidative damage.6.0e-1252.54Show/hide
Query:  HQETVYWGYTYLPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV
        H+E + W       VE  KK+R KS+Y K+TDTG+DP+EAAKRLN++WD+ A IE+ +V
Subjt:  HQETVYWGYTYLPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTAKIEDPEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCCATTCCACCAACAAAACTGACACCGAAAAGCTCACGACGATTTCTCTTGACCGGAATTGAGGAGAAGAAAGATCATCACAGTACTGTAATTTATCATCAGCT
TCGCCTTGGAACCAAGCTCTGCATCGTTCTTTGCTCTCCTTCCTCTGTCAAAGAAGTCCTCCGCCACCAAGAAACCGTCTATTGGGGTTACACATATTTACCAACGGTTG
AGGCACCCAAGAAAAAACGCAGTAAATCTTTATATGAAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGCGAAGAGACTAAACATTGATTGGGACACTACAGCT
AAGATCGAAGATCCGGAAGTGCCTGTTGTTGTGGTTTGTTTTCTTGGCCCATCATCAAAGACACTGTGCTTATGTTCCTTATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGCCCATTCCACCAACAAAACTGACACCGAAAAGCTCACGACGATTTCTCTTGACCGGAATTGAGGAGAAGAAAGATCATCACAGTACTGTAATTTATCATCAGCT
TCGCCTTGGAACCAAGCTCTGCATCGTTCTTTGCTCTCCTTCCTCTGTCAAAGAAGTCCTCCGCCACCAAGAAACCGTCTATTGGGGTTACACATATTTACCAACGGTTG
AGGCACCCAAGAAAAAACGCAGTAAATCTTTATATGAAAAAGCCACAGACACTGGTGTGGATCCTCGAGAGGCTGCGAAGAGACTAAACATTGATTGGGACACTACAGCT
AAGATCGAAGATCCGGAAGTGCCTGTTGTTGTGGTTTGTTTTCTTGGCCCATCATCAAAGACACTGTGCTTATGTTCCTTATTTTAG
Protein sequenceShow/hide protein sequence
MTPIPPTKLTPKSSRRFLLTGIEEKKDHHSTVIYHQLRLGTKLCIVLCSPSSVKEVLRHQETVYWGYTYLPTVEAPKKKRSKSLYEKATDTGVDPREAAKRLNIDWDTTA
KIEDPEVPVVVVCFLGPSSKTLCLCSLF