; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041279 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041279
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:14892020..14892496
RNA-Seq ExpressionLag0041279
SyntenyLag0041279
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_025628190.1 uncharacterized protein LOC112721335 [Arachis hypogaea]3.7e-2340.15Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        N L D+G  G+PFTW+NRRQG  LVK RLDR+L   +W   +  A V  LT  GSDH  IL+E+        RRF Y   W  +E   R+V + W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE
        GS  + + +K+K  +  +++W++ HK+N+ +EI+ L+
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE

XP_025640859.1 uncharacterized protein LOC112735543 [Arachis hypogaea]1.6e-2340.15Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        N L D+G  G+PFTW+NRRQG  LVK RLDR+L   +W   +  A V  LT  GSDH  IL+E+        RRF Y   W  +E   R++ + W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE
        GS  + + +K+K  +  +++W+K HK+N+ +EI+ L+
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE

XP_025675778.1 uncharacterized protein LOC112776041 [Arachis hypogaea]3.7e-2340.15Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        N L D+G  G+PFTW+NRRQG  LVK R DR+L   +W   +  A V  LT  GSDH  IL+E+        RRF Y   W  +E   R+V + W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE
        GS  + + +K+K  +  +++W+K HK+N+ +EI+ L+
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE

XP_025677954.1 uncharacterized protein LOC112777779 [Arachis hypogaea]1.3e-2340.88Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        N L D+G  G+PFTW+NRRQG  LVK RLDR+L   +W   +  A V  LT  GSDH  IL+E+        RRF Y   W  +E   R+V + W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE
        GS  + + +K+K  +  +++W+K HK+N+ +EI+ L+
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE

XP_027086545.1 uncharacterized protein LOC113708282 [Coffea arabica]6.2e-2335.95Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        NNL D+GF G P+TWSN   G   ++ RLDR L S +W + + +AK  H+ ++GSDH M+L++S   + K   RF ++  W K E   ++V+  W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAK
        G+  YR+T +I   ++A+L+W+   K N+L+ I ++++ I  E+ +++   AK
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAK

TrEMBL top hitse value%identityAlignment
A0A251Q0X9 Reverse transcriptase domain-containing protein2.0e-2238.82Show/hide
Query:  LSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGS
        L DLGF GYPFTWSNRR+G   ++ RLDR L S  W   +  AKV H    GSDH +ILLE          RF Y+  W K+  C   V+D+W+    GS
Subjt:  LSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGS

Query:  YSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAKI
          YR+ EK+K  +  + +WR+G K+N    I+++ + + +       D +K+
Subjt:  YSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAKI

A0A2N9JBK7 Reverse transcriptase domain-containing protein3.3e-2240.69Show/hide
Query:  DLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGSYS
        DLGF G+ +TWSN+R G   +K RLDR L + DW   + +A V+HLTS  SDH  ILL++      G R F +   W KD S L++V D WQ N+ GS++
Subjt:  DLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGSYS

Query:  YRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQP
        +R+ +K++  K A+ +W K     A   I++LE+ I  +L   +P
Subjt:  YRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQP

A0A6P4BTS0 uncharacterized protein LOC1074709024.0e-2339.42Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        N L D+G  G+PFTW+N+RQG  LVK RLDR+L   +W   +  A V  LT  GSDH  +L+E+        RRF Y   W  +E   R+V + W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE
        GS  + + +K+K  +  +++W+K HK+N+ +EI+ L+
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLE

A0A6P6U739 uncharacterized protein LOC1137082823.0e-2335.95Show/hide
Query:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS
        NNL D+GF G P+TWSN   G   ++ RLDR L S +W + + +AK  H+ ++GSDH M+L++S   + K   RF ++  W K E   ++V+  W+  V 
Subjt:  NNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVS

Query:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAK
        G+  YR+T +I   ++A+L+W+   K N+L+ I ++++ I  E+ +++   AK
Subjt:  GSYSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAK

M5VH78 Reverse transcriptase domain-containing protein (Fragment)2.0e-2238.82Show/hide
Query:  LSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGS
        L DLGF GYPFTWSNRR+G   ++ RLDR L S  W   +  AKV H    GSDH +ILLE          RF Y+  W K+  C   V+D+W+    GS
Subjt:  LSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGS

Query:  YSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAKI
          YR+ EK+K  +  + +WR+G K+N    I+++ + + +       D +K+
Subjt:  YSYRVTEKIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAACCTCTCAGATCTTGGGTTCTTTGGATACCCGTTTACATGGTCAAATCGCAGGCAGGGCTCTTATCTGGTCAAGCTTCGGTTGGATAGGTTTCTAGGGTCAAA
AGATTGGTGTCGGGATTGGCAGAGAGCGAAGGTGAGACACCTAACATCCTTGGGCTCTGATCACCGTATGATCCTCCTAGAGTCTACGACTCCGATCACCAAAGGTCCAA
GGCGGTTTAATTATAATCCTTCATGGTCGAAGGACGAGTCTTGCTTGAGGTTGGTCAAAGATACTTGGCAGCATAATGTGAGTGGGAGCTATTCGTACAGGGTTACAGAG
AAGATCAAAGGAACAAAGATGGCAATCCTTCGGTGGAGGAAGGGTCACAAGTCTAATGCATTAGAAGAAATTCAGAAGCTTGAAAGGATAATTAATGTTGAACTGAATCA
GACGCAGCCGGATTTTGCGAAAATCGTGGAGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAACCTCTCAGATCTTGGGTTCTTTGGATACCCGTTTACATGGTCAAATCGCAGGCAGGGCTCTTATCTGGTCAAGCTTCGGTTGGATAGGTTTCTAGGGTCAAA
AGATTGGTGTCGGGATTGGCAGAGAGCGAAGGTGAGACACCTAACATCCTTGGGCTCTGATCACCGTATGATCCTCCTAGAGTCTACGACTCCGATCACCAAAGGTCCAA
GGCGGTTTAATTATAATCCTTCATGGTCGAAGGACGAGTCTTGCTTGAGGTTGGTCAAAGATACTTGGCAGCATAATGTGAGTGGGAGCTATTCGTACAGGGTTACAGAG
AAGATCAAAGGAACAAAGATGGCAATCCTTCGGTGGAGGAAGGGTCACAAGTCTAATGCATTAGAAGAAATTCAGAAGCTTGAAAGGATAATTAATGTTGAACTGAATCA
GACGCAGCCGGATTTTGCGAAAATCGTGGAGTGTTAG
Protein sequenceShow/hide protein sequence
MNNLSDLGFFGYPFTWSNRRQGSYLVKLRLDRFLGSKDWCRDWQRAKVRHLTSLGSDHRMILLESTTPITKGPRRFNYNPSWSKDESCLRLVKDTWQHNVSGSYSYRVTE
KIKGTKMAILRWRKGHKSNALEEIQKLERIINVELNQTQPDFAKIVEC