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Lag0041300 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041300
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:15236804..15237178
RNA-Seq ExpressionLag0041300
SyntenyLag0041300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG72736.1 hypothetical protein EZV62_001315 [Acer yangbiense]6.0e-0537.31Show/hide
Query:  GLKRSLRF--EESWTKYEECKDIISQAWR-SHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAI
        G  RS RF  EE W K+++C+DIIS +W+ S    +   +QEKI  C ++L +WS  ++ G+++  +
Subjt:  GLKRSLRF--EESWTKYEECKDIISQAWR-SHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAI

XP_015386480.1 uncharacterized protein LOC107177332 [Citrus sinensis]1.0e-0432Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI
        KR  RFE  W K  ECK++I Q+W   N  +  S+Q K+  C   L +W   +Y+ + +  I   +K++ E+  + D  SM     ++K+ + LL + EI
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]3.1e-0934.15Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI
        +R  RFEE W  ++ECK+I+ + W           Q KI  CL +L KW+  R  GSLRGAI R E E+Q  V          +   +++L +LLE++E 
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI

Query:  EGNKSPHAAEAHRL--DLTPYIN
           +SP   +   +   +TP +N
Subjt:  EGNKSPHAAEAHRL--DLTPYIN

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]2.7e-0542.86Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQ
        +R +RFEESW + + C+DII+  W S       + Q KI  CL  L +W+  R   SL+GAI+  EKEL+
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQ

XP_030929426.1 uncharacterized protein LOC115955445 [Quercus lobata]7.9e-0529.25Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHN-TQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMG-FVKMKEKELAQLLEDD
        KR   FE +W ++++CK+II  AW+ H+  Q      E +++C+  L +W+   +R   R  I    K+LQ  +  +   S G  +    KE+ ++L+D+
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHN-TQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMG-FVKMKEKELAQLLEDD

Query:  EIEGNK
        E++ N+
Subjt:  EIEGNK

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein1.2e-0635.64Show/hide
Query:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE
        R  RFE  W K E+ KD++ QAW     + +P  Q  EK+K C + L  WS +R+ G L   I    K LQE    N +     +   + E+  LLE +E
Subjt:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE

Query:  I
        I
Subjt:  I

A0A2N9H6V4 RNase H domain-containing protein1.5e-0638.61Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAP-SVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKEL-QEWVCRNDVQSMGFVKMKEKELAQLLEDD
        ++  RFEE WT ++ C+D I +AW S +   A   V EKIK+C   LKKWS  ++ GS+R AI+     L QE   R + Q++  ++   +ELA L   +
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAP-SVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKEL-QEWVCRNDVQSMGFVKMKEKELAQLLEDD

Query:  E
        E
Subjt:  E

A0A2N9HND5 CCHC-type domain-containing protein1.2e-0635.64Show/hide
Query:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE
        R  RFE  W K E+ KD++ QAW     + +P  Q  EK+K C + L  WS +R+ G L   I    K LQE    N +     +   + E+  LLE +E
Subjt:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE

Query:  I
        I
Subjt:  I

A0A2N9I611 Uncharacterized protein6.3e-0832.67Show/hide
Query:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE
        R  RFE++WTK+EEC+ +I   WR   + + P+ Q  EK+K+C  +L  WS   + G+++  +  +E+ L++    N  Q    +K+ + E+ +LLE +E
Subjt:  RSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQ--EKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDE

Query:  I
        +
Subjt:  I

A0A6J1DRA0 uncharacterized protein LOC1110224231.5e-0934.15Show/hide
Query:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI
        +R  RFEE W  ++ECK+I+ + W           Q KI  CL +L KW+  R  GSLRGAI R E E+Q  V          +   +++L +LLE++E 
Subjt:  KRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEI

Query:  EGNKSPHAAEAHRL--DLTPYIN
           +SP   +   +   +TP +N
Subjt:  EGNKSPHAAEAHRL--DLTPYIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTGAAACGTTCGCTAAGATTTGAGGAGTCATGGACCAAATACGAAGAATGTAAAGATATTATTTCGCAGGCTTGGAGGAGTCATAATACTCAAGATGCTCCCTC
AGTCCAAGAAAAGATAAAGATGTGCTTAATTGACCTCAAAAAATGGAGTTGTGATAGGTACAGAGGTTCTTTGAGAGGGGCAATTTCAAGAGTAGAGAAAGAGCTTCAAG
AGTGGGTGTGCAGAAATGATGTTCAGAGTATGGGGTTTGTGAAAATGAAGGAAAAGGAATTAGCACAACTGTTGGAGGATGATGAGATTGAAGGGAATAAAAGTCCCCAC
GCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTGAAACGTTCGCTAAGATTTGAGGAGTCATGGACCAAATACGAAGAATGTAAAGATATTATTTCGCAGGCTTGGAGGAGTCATAATACTCAAGATGCTCCCTC
AGTCCAAGAAAAGATAAAGATGTGCTTAATTGACCTCAAAAAATGGAGTTGTGATAGGTACAGAGGTTCTTTGAGAGGGGCAATTTCAAGAGTAGAGAAAGAGCTTCAAG
AGTGGGTGTGCAGAAATGATGTTCAGAGTATGGGGTTTGTGAAAATGAAGGAAAAGGAATTAGCACAACTGTTGGAGGATGATGAGATTGAAGGGAATAAAAGTCCCCAC
GCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAA
Protein sequenceShow/hide protein sequence
MGLKRSLRFEESWTKYEECKDIISQAWRSHNTQDAPSVQEKIKMCLIDLKKWSCDRYRGSLRGAISRVEKELQEWVCRNDVQSMGFVKMKEKELAQLLEDDEIEGNKSPH
AAEAHRLDLTPYIN