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Lag0041301 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041301
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr13:15247595..15249691
RNA-Seq ExpressionLag0041301
SyntenyLag0041301
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043323.1 hypothetical protein E6C27_scaffold110G002340 [Cucumis melo var. makuwa]1.0e-1253.75Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KKTSR  ST NPDG  I+  + S R+   F ELGI+D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]5.1e-1252.5Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KK SR  ST NPDG  I+  + S R+   F ELGI D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

KAA0062705.1 uncharacterized protein E6C27_scaffold382G00250 [Cucumis melo var. makuwa]3.9e-1259.42Show/hide
Query:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF
        +KY KPP RK KKTSRP STHNP+G PIK LD S+ +   F +LG+ +E ++ TYLA  LS WL VFVF
Subjt:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]1.7e-1252.5Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KK SR  ST NPDG+ I+  + S R+   F ELGI+D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.2e-1362.32Show/hide
Query:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF
        +KY KPP RK KKTSRP STHNPDG+PI+  D SK + + F +L + D+ R+ TYLAAFLS WL VFVF
Subjt:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF

TrEMBL top hitse value%identityAlignment
A0A5A7TIV2 Uncharacterized protein4.9e-1353.75Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KKTSR  ST NPDG  I+  + S R+   F ELGI+D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

A0A5A7UGW6 PMD domain-containing protein2.4e-1252.5Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KK SR  ST NPDG  I+  + S R+   F ELGI D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

A0A5D3C543 PMD domain-containing protein8.4e-1352.5Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KK SR  ST NPDG+ I+  + S R+   F ELGI+D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

A0A5D3DAL3 PMD domain-containing protein1.9e-1259.42Show/hide
Query:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF
        +KY KPP RK KKTSRP STHNP+G PIK LD S+ +   F +LG+ +E ++ TYLA  LS WL VFVF
Subjt:  LKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVF

A0A5D3DCE5 PMD domain-containing protein2.4e-1252.5Show/hide
Query:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF
        + +G+  Y+KP TRK KK SR  ST NPDG  I+  + S R+   F ELGI D+L++ TYLAAFLS WL +FVF Q+  F
Subjt:  YIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKRKPEFFRELGIEDELRNNTYLAAFLS-WLSVFVFFQQVDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATAGTATCCTGCGGGTGCGGGGGTGGTCACCGAACTTTCCTTGCAACAATTTCACTCTTGTCTAAACCAGTCACTTTGCAGACTGTGGTATCCTACAAGGATGG
TCACAAAACTTGCCTTATAACGACTTCATTCCTATTTAGATTGGGGTCACCAGACTCGCCTACAGTGATTTCACTCATGTCTAGACCAGTTGACGAATATATTATAGGAA
ATTTGAAGTATGAGAAGCCTCCTACTCGAAAAGCAAAGAAAACTAGTCGCCCTCACTCGACTCATAATCCAGATGGAGTTCCTATCAAGTGTCTTGACTTGTCTAAGAGA
AAACCTGAGTTTTTTCGTGAGCTTGGTATAGAAGATGAATTGAGGAACAACACATACTTGGCTGCTTTTCTTTCTTGGTTATCTGTATTTGTATTTTTCCAACAAGTAGA
TTTCTCTCCGTCCAGAGGTCTTCAAAGTTGCAAGTTTTATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTATAGTATCCTGCGGGTGCGGGGGTGGTCACCGAACTTTCCTTGCAACAATTTCACTCTTGTCTAAACCAGTCACTTTGCAGACTGTGGTATCCTACAAGGATGG
TCACAAAACTTGCCTTATAACGACTTCATTCCTATTTAGATTGGGGTCACCAGACTCGCCTACAGTGATTTCACTCATGTCTAGACCAGTTGACGAATATATTATAGGAA
ATTTGAAGTATGAGAAGCCTCCTACTCGAAAAGCAAAGAAAACTAGTCGCCCTCACTCGACTCATAATCCAGATGGAGTTCCTATCAAGTGTCTTGACTTGTCTAAGAGA
AAACCTGAGTTTTTTCGTGAGCTTGGTATAGAAGATGAATTGAGGAACAACACATACTTGGCTGCTTTTCTTTCTTGGTTATCTGTATTTGTATTTTTCCAACAAGTAGA
TTTCTCTCCGTCCAGAGGTCTTCAAAGTTGCAAGTTTTATGGTTGA
Protein sequenceShow/hide protein sequence
MTIVSCGCGGGHRTFLATISLLSKPVTLQTVVSYKDGHKTCLITTSFLFRLGSPDSPTVISLMSRPVDEYIIGNLKYEKPPTRKAKKTSRPHSTHNPDGVPIKCLDLSKR
KPEFFRELGIEDELRNNTYLAAFLSWLSVFVFFQQVDFSPSRGLQSCKFYG