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Lag0041308 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041308
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr13:15402189..15404294
RNA-Seq ExpressionLag0041308
SyntenyLag0041308
Gene Ontology termsNA
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RIA04115.1 hypothetical protein BRARA_K01685 [Brassica rapa]8.7e-2346.76Show/hide
Query:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL
        G +F+ K + + G     K+AG LLT  + DGN QIFPL  AIVDSE D+SWEWFF QL   +   E LVFVSDRH  I K + KVFP+A H +C+VHL 
Subjt:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL

Query:  RNLRETYKGGIVVLCVAHTMG-------YSILLEMKVVE
        RN+R  +K   +   VA           YSI  E+K ++
Subjt:  RNLRETYKGGIVVLCVAHTMG-------YSILLEMKVVE

XP_010451177.1 PREDICTED: uncharacterized protein LOC104733288 [Camelina sativa]9.6e-2248.33Show/hide
Query:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT
        LF S GQS   F +K  K+    G    NK+ G LL   ++DGN  ++P+   I DSE D SWEWF +QLK VI   +DL FVSDRH+ I K I K++P 
Subjt:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT

Query:  AFHGVCIVHLLRNLRETYKG
        A HG+CI HL+ N+   YKG
Subjt:  AFHGVCIVHLLRNLRETYKG

XP_010474020.1 PREDICTED: uncharacterized protein LOC104753468 [Camelina sativa]9.6e-2248.33Show/hide
Query:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT
        LF S GQS   F +K  K+    G    NK+ G LL   ++DGN  ++P+   I DSE D SWEWF +QLK VI   +DL FVSDRH+ I K I K++P 
Subjt:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT

Query:  AFHGVCIVHLLRNLRETYKG
        A HG+CI HL+ N+   YKG
Subjt:  AFHGVCIVHLLRNLRETYKG

XP_010474314.1 PREDICTED: uncharacterized protein LOC104753816 [Camelina sativa]9.6e-2248.33Show/hide
Query:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT
        LF S GQS   F +K  K+    G    NK+ G LL   ++DGN  ++P+   I DSE D SWEWF +QLK VI   +DL FVSDRH+ I K I K++P 
Subjt:  LFASIGQS---FIEKDMKL----GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT

Query:  AFHGVCIVHLLRNLRETYKG
        A HG+CI HL+ N+   YKG
Subjt:  AFHGVCIVHLLRNLRETYKG

XP_013633327.1 PREDICTED: uncharacterized protein LOC106339045 [Brassica oleracea var. oleracea]7.3e-2253.91Show/hide
Query:  LFASI-GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGV
        L ASI G  F+ K + + G     K+AG LLT  + D N QIFP+  AIVDSE DLSWEWFF +L A +   E LVFVSDRH  I K + KV+P A H V
Subjt:  LFASI-GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGV

Query:  CIVHLLRNLRETYKG
        C+VHL RN+R  +KG
Subjt:  CIVHLLRNLRETYKG

TrEMBL top hitse value%identityAlignment
A0A397KZ66 SWIM-type domain-containing protein3.0e-2150.93Show/hide
Query:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL
        G  F+ K + + G     K+AG LLT  + DGN QIFPL  A+VDSE D SWEWFF QL A +   ++LVFVSDRHM I K + KV+P   H +C+VHL 
Subjt:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL

Query:  RNLRETYK
        RN+R  ++
Subjt:  RNLRETYK

A0A397L328 SWIM-type domain-containing protein4.2e-2346.76Show/hide
Query:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL
        G +F+ K + + G     K+AG LLT  + DGN QIFPL  AIVDSE D+SWEWFF QL   +   E LVFVSDRH  I K + KVFP+A H +C+VHL 
Subjt:  GQSFIEKDMKL-GDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLL

Query:  RNLRETYKGGIVVLCVAHTMG-------YSILLEMKVVE
        RN+R  +K   +   VA           YSI  E+K ++
Subjt:  RNLRETYKGGIVVLCVAHTMG-------YSILLEMKVVE

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like8.8e-2153.68Show/hide
Query:  NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLLRNLRETYKGGIV
        +K+ G LLT  +IDGN+QIFPL  +IVDSE D SW WFF  +K  +G REDLV +SDRH+ I K++  VFP A + VC+ HLL++L+  YK  I+
Subjt:  NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLLRNLRETYKGGIV

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like8.8e-2153.68Show/hide
Query:  NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLLRNLRETYKGGIV
        +K+ G LLT  +IDGN+QIFPL  +IVDSE D SW WFF  +K  +G REDLV +SDRH+ I K++  VFP A + VC+ HLL++L+  YK  I+
Subjt:  NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPTAFHGVCIVHLLRNLRETYKGGIV

A0A6J1DTW2 uncharacterized protein LOC1110234503.0e-2147.97Show/hide
Query:  DCPDLFASIGQSFIE-KDMKLGDDRD--NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT
        D  D +A I + F++ K+M  G   +  +K+ G LLT  + DGN+QIFPL   IVDSE D SW WFF  LK   G RE LV +SDRH+ I K++ KVFP 
Subjt:  DCPDLFASIGQSFIE-KDMKLGDDRD--NKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHMRILKTIPKVFPT

Query:  AFHGVCIVHLLRNLRETYKGGIV
        A + VC  HLL+NL+ +YK  ++
Subjt:  AFHGVCIVHLLRNLRETYKGGIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCAACCGAGAATGTCATTCCAGAATTTGATGGACACTGTAATGTTACGGTTAGAAATTTCAGGTAACTATGATTGTCCGGATCTATTTGCTAGCATAGGGCAATC
TTTCATAGAAAAGGATATGAAATTGGGGGATGATCGAGATAATAAGTTCGCTGGTTATTTATTGACTGTTGTATCTATTGATGGAAATGACCAGATATTTCCATTGGGTT
GTGCAATAGTTGATTCAGAGAAGGATTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGGTCATTGGTGTGCGAGAAGATCTTGTTTTCGTGTCTGATAGACACATG
CGTATATTGAAAACCATTCCCAAGGTATTTCCTACTGCTTTTCATGGAGTTTGTATTGTTCACTTGTTGAGGAACTTAAGGGAAACGTACAAGGGTGGTATTGTCGTTCT
CTGTGTTGCACATACTATGGGATACTCCATCCTATTGGAAATGAAGGTAGTTGAGATATACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCAACCGAGAATGTCATTCCAGAATTTGATGGACACTGTAATGTTACGGTTAGAAATTTCAGGTAACTATGATTGTCCGGATCTATTTGCTAGCATAGGGCAATC
TTTCATAGAAAAGGATATGAAATTGGGGGATGATCGAGATAATAAGTTCGCTGGTTATTTATTGACTGTTGTATCTATTGATGGAAATGACCAGATATTTCCATTGGGTT
GTGCAATAGTTGATTCAGAGAAGGATTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGGTCATTGGTGTGCGAGAAGATCTTGTTTTCGTGTCTGATAGACACATG
CGTATATTGAAAACCATTCCCAAGGTATTTCCTACTGCTTTTCATGGAGTTTGTATTGTTCACTTGTTGAGGAACTTAAGGGAAACGTACAAGGGTGGTATTGTCGTTCT
CTGTGTTGCACATACTATGGGATACTCCATCCTATTGGAAATGAAGGTAGTTGAGATATACCAATAA
Protein sequenceShow/hide protein sequence
MMQPRMSFQNLMDTVMLRLEISGNYDCPDLFASIGQSFIEKDMKLGDDRDNKFAGYLLTVVSIDGNDQIFPLGCAIVDSEKDLSWEWFFVQLKAVIGVREDLVFVSDRHM
RILKTIPKVFPTAFHGVCIVHLLRNLRETYKGGIVVLCVAHTMGYSILLEMKVVEIYQ