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Lag0041324 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041324
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:15737272..15740866
RNA-Seq ExpressionLag0041324
SyntenyLag0041324
Gene Ontology termsNA
InterPro domainsIPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600811.1 hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2638.7Show/hide
Query:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN
        EGS +  +I+ P+A   F  + +  P Y+ +        PP N + +E    TY   V  I  S LNF G LGG+ INLR  GY+ I SP  +  W    
Subjt:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN

Query:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID
        + +SF  ++ E+ +    V QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID
Subjt:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID

Query:  HYVRVSIHEATPPSICVSVMCYECEQQWNL
         YV+VS    TP ++CV  +C EC+++WNL
Subjt:  HYVRVSIHEATPPSICVSVMCYECEQQWNL

KAG7031448.1 hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-0646.07Show/hide
Query:  VVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEIDHYVRVSI
        V QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID YV+V+I
Subjt:  VVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEIDHYVRVSI

XP_022942054.1 uncharacterized protein LOC111447242 [Cucurbita moschata]1.5e-2638.7Show/hide
Query:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN
        EGS +  +I+ P+A   F  + +  P Y+ +        PP N + +E    TY   V  I  S LNF G LGG+ INLR  GY+ I SP  +  W    
Subjt:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN

Query:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID
        + +SF  ++ E+ +    V QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID
Subjt:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID

Query:  HYVRVSIHEATPPSICVSVMCYECEQQWNL
         YV+VS    TP ++CV  +C EC+++WNL
Subjt:  HYVRVSIHEATPPSICVSVMCYECEQQWNL

XP_022989850.1 uncharacterized protein LOC111486913 [Cucurbita maxima]3.2e-2638.26Show/hide
Query:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN
        EGS +  +I+ P+A   F  + +  P Y+ +        PP N + +E    TY   V  I  S LNF G LGG+ INL   GY+ I SP  +  W    
Subjt:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN

Query:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID
        + +SF  ++ E+ +    V+QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID
Subjt:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID

Query:  HYVRVSIHEATPPSICVSVMCYECEQQWNL
         YV+VS    TP ++CV  +C EC+++WNL
Subjt:  HYVRVSIHEATPPSICVSVMCYECEQQWNL

TrEMBL top hitse value%identityAlignment
A0A0A0KJD0 Uncharacterized protein4.9e-0440.59Show/hide
Query:  ETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTNNANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHL
        + V  I  S LNF G LGG+ INLR  GY+ I SP  +  W    N +SF  ++ E+ +    V QEN AI W+   N+Q LF+    +F   +R+IG L
Subjt:  ETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTNNANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHL

Query:  L
        L
Subjt:  L

A0A6J1FQ78 uncharacterized protein LOC1114472427.1e-2738.7Show/hide
Query:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN
        EGS +  +I+ P+A   F  + +  P Y+ +        PP N + +E    TY   V  I  S LNF G LGG+ INLR  GY+ I SP  +  W    
Subjt:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN

Query:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID
        + +SF  ++ E+ +    V QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID
Subjt:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID

Query:  HYVRVSIHEATPPSICVSVMCYECEQQWNL
         YV+VS    TP ++CV  +C EC+++WNL
Subjt:  HYVRVSIHEATPPSICVSVMCYECEQQWNL

A0A6J1JNI2 uncharacterized protein LOC1114869131.6e-2638.26Show/hide
Query:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN
        EGS +  +I+ P+A   F  + +  P Y+ +        PP N + +E    TY   V  I  S LNF G LGG+ INL   GY+ I SP  +  W    
Subjt:  EGSPNQPNINVPRAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDI-SPHVQISWNDTN

Query:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID
        + +SF  ++ E+ +    V+QEN AI W+   N+Q LF          +RVIG LL D  G++Q + +H  +   V  +E LVFV+G F+NYR L+EEID
Subjt:  NANSFLNIMFEIFAG--HVVQEN-AITWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDP-GDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEID

Query:  HYVRVSIHEATPPSICVSVMCYECEQQWNL
         YV+VS    TP ++CV  +C EC+++WNL
Subjt:  HYVRVSIHEATPPSICVSVMCYECEQQWNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAACCCGTTCGTCCATCTTCATCTTCCACAACCCTCCCTTCCCACCATTTCCCCCCTGAAAGACTTAATTCTCCATTTCCCACCATTTTCCACCCTCCAACACA
GAGTGTATCCCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGACGACCTTCTTCCGTCGTGCCGTCGAGACTCTTGCTTGCCCCACATCCTCCA
TCGATTCTCCTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACCAAGTTTGAACCTTTTTGCTTGATGGAAGGCAGTCCAAATCAACCAAATATTAATGTTCCT
CGTGCTCATAAAGCTTTTTTTGTTCTTGATAACTTTCCACCTATATACTTCGATGTCAATGACTTTTCTGATATGAATTCTCCTCCCCGAAACGTGGACCAAATAGAAGT
TTTCGTTTGTACTTATGGAGAAACAGTGAGAACAATTTTAGAAAGCTACCTGAACTTCACTGGAAACCTAGGTGGAATCCTCATTAACTTGAGGAGGGATGGTTATATAG
ATATTAGTCCTCATGTTCAAATTTCTTGGAATGACACAAACAATGCCAACTCATTTCTAAATATAATGTTTGAGATATTTGCTGGGCATGTAGTTCAGGAAAATGCAATT
ACTTGGTATCCAGCAAATAATATACAATTTTTGTTTGATGAGGATGCTGGCTACTTTACGCCAAATAAACGAGTAATAGGGCATTTGCTTGGTGATCCTGGAGATAGACA
ATTTATGGACTTACATCATTGTATGGAAGATTGGGTTGAATTGGATGAAACTTTAGTATTTGTGATTGGTAGGTTTCAAAATTACAGACGTCTTGATGAAGAAATAGATC
ATTATGTACGAGTTTCAATTCATGAAGCAACTCCGCCAAGCATTTGCGTCTCAGTCATGTGTTATGAATGTGAGCAGCAGTGGAATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCACCAACCCGTTCGTCCATCTTCATCTTCCACAACCCTCCCTTCCCACCATTTCCCCCCTGAAAGACTTAATTCTCCATTTCCCACCATTTTCCACCCTCCAACACA
GAGTGTATCCCAATCCCTACCTCTCGCATCGCGCCGACGACCCACATCCGCCGTGCCGACGACCTTCTTCCGTCGTGCCGTCGAGACTCTTGCTTGCCCCACATCCTCCA
TCGATTCTCCTTCTGCGCGAGGACTGTACAATTTCTCAGAAATTCAAACCAAGTTTGAACCTTTTTGCTTGATGGAAGGCAGTCCAAATCAACCAAATATTAATGTTCCT
CGTGCTCATAAAGCTTTTTTTGTTCTTGATAACTTTCCACCTATATACTTCGATGTCAATGACTTTTCTGATATGAATTCTCCTCCCCGAAACGTGGACCAAATAGAAGT
TTTCGTTTGTACTTATGGAGAAACAGTGAGAACAATTTTAGAAAGCTACCTGAACTTCACTGGAAACCTAGGTGGAATCCTCATTAACTTGAGGAGGGATGGTTATATAG
ATATTAGTCCTCATGTTCAAATTTCTTGGAATGACACAAACAATGCCAACTCATTTCTAAATATAATGTTTGAGATATTTGCTGGGCATGTAGTTCAGGAAAATGCAATT
ACTTGGTATCCAGCAAATAATATACAATTTTTGTTTGATGAGGATGCTGGCTACTTTACGCCAAATAAACGAGTAATAGGGCATTTGCTTGGTGATCCTGGAGATAGACA
ATTTATGGACTTACATCATTGTATGGAAGATTGGGTTGAATTGGATGAAACTTTAGTATTTGTGATTGGTAGGTTTCAAAATTACAGACGTCTTGATGAAGAAATAGATC
ATTATGTACGAGTTTCAATTCATGAAGCAACTCCGCCAAGCATTTGCGTCTCAGTCATGTGTTATGAATGTGAGCAGCAGTGGAATCTATAA
Protein sequenceShow/hide protein sequence
MHQPVRPSSSSTTLPSHHFPPERLNSPFPTIFHPPTQSVSQSLPLASRRRPTSAVPTTFFRRAVETLACPTSSIDSPSARGLYNFSEIQTKFEPFCLMEGSPNQPNINVP
RAHKAFFVLDNFPPIYFDVNDFSDMNSPPRNVDQIEVFVCTYGETVRTILESYLNFTGNLGGILINLRRDGYIDISPHVQISWNDTNNANSFLNIMFEIFAGHVVQENAI
TWYPANNIQFLFDEDAGYFTPNKRVIGHLLGDPGDRQFMDLHHCMEDWVELDETLVFVIGRFQNYRRLDEEIDHYVRVSIHEATPPSICVSVMCYECEQQWNL